run_metadata: 70179
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70179 | SRR19568479 | SRX15620531 | SRS13321066 | SRP378839 | PRJNA846550 | The mechanism of AHR mediated disturbance of lipid metabolism in dioxin induced cardiac development injury in zebrafish | PRJNA846550 | Other | Dioxin like environmental pollutants are chemical substances with persistent ability to cause environmental damage which have a vital impact on the growth and development of human and other organisms. Previous studies have confirmed that dioxin like environmental pollutants are cardiotoxic but the molecular mechanism is still unclear. | TCDD 3 | strain:AB|age:5 dpf|dev stage:5 dpf|sex:not determined|tissue:heart|id:7|BioSampleModel:Model organism or animal | RNA seq of zebrafish Danio rerio: larval heart of TCDD treatment | TCDD 3 | TCDD 3 | RNA seq of zebrafish Danio rerio: replicate 3 of TCDD treatment | RNA-Seq | TRANSCRIPTOMIC | PCR | PAIRED | BGISEQ | BGISEQ-500 | SRP378839 | TCDD_3_1.fq.gz TCDD_3_2.fq.gz | fastq fastq | 6763596300.0 | 45090642.0 | TCDD 3 1.fq.gz | 0:150 1:150 | A:1802620229;C:1572061293;G:1575663838;T:1813250940;N:0 | 150 | 150 | 1802620229 | 1572061293 | 1575663838 | 1813250940 | 0 | SRX15620531 | SRS13321066 | SRA1432977 | Shandong University|School of basic medical sciences | Shandong University | 1 | 0.93871 | 0.07491 | 0.67754 | 0.51592 | 150 | B | usable mapping rate | bgi | bgi | unknown | random_priming | unknown | bulk | unknown | unknown | China | 2022-06-07 | Larval | Larval | Heart | Cardiovascular System |