run_metadata: 70178
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70178 | SRR19568478 | SRX15620532 | SRS13321067 | SRP378839 | PRJNA846550 | The mechanism of AHR mediated disturbance of lipid metabolism in dioxin induced cardiac development injury in zebrafish | PRJNA846550 | Other | Dioxin like environmental pollutants are chemical substances with persistent ability to cause environmental damage which have a vital impact on the growth and development of human and other organisms. Previous studies have confirmed that dioxin like environmental pollutants are cardiotoxic but the molecular mechanism is still unclear. | TCDD 4 | strain:AB|age:5 dpf|dev stage:5 dpf|sex:not determined|tissue:heart|id:8|BioSampleModel:Model organism or animal | RNA seq of zebrafish Danio rerio: larval heart of TCDD treatment | TCDD 4 | TCDD 4 | RNA seq of zebrafish Danio rerio: replicate 4 of TCDD treatment | RNA-Seq | TRANSCRIPTOMIC | PCR | PAIRED | BGISEQ | BGISEQ-500 | SRP378839 | TCDD_4_1.fq.gz TCDD_4_2.fq.gz | fastq fastq | 6664935600.0 | 44432904.0 | TCDD 4 1.fq.gz | 0:150 1:150 | A:1778771695;C:1547959320;G:1547444025;T:1790760560;N:0 | 150 | 150 | 1778771695 | 1547959320 | 1547444025 | 1790760560 | 0 | SRX15620532 | SRS13321067 | SRA1432977 | Shandong University|School of basic medical sciences | Shandong University | 1 | 0.93639 | 0.07898 | 0.67649 | 0.51984 | 150 | B | usable mapping rate | bgi | bgi | unknown | random_priming | unknown | bulk | unknown | unknown | China | 2022-06-07 | Larval | Larval | Heart | Cardiovascular System |