run_metadata: 67545
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67545 | SRR17191194 | SRX13373013 | SRS11277333 | SRP350168 | PRJNA787741 | The effects of tire wear particles on zebrafish eyes | PRJNA787741 | Other | The RNA sequencing data provides biomarkers for the phototransduction dysfunction induced by the tire wear particles | LT25 1 | LT25 1 | isolate:larvae|age:5 days|sex:not determined|tissue:whole body13|BioSampleModel:Model organism or animal | RNA Seq of Danio rerio larvea | LT25 1 | LT25 1 | The cDNA librarie was constructed from zebrafish larvae treated by high concentration tire wear particle leachate for 5 days. The libraries were sequenced using an Illumina Novaseq 6009 platform. | RNA-Seq | TRANSCRIPTOMIC | PolyA | PAIRED | ILLUMINA | Illumina NovaSeq 6000 | SRP350168 | LT25_1_1.fq.gz LT25_1_2.fq.gz | fastq fastq | 6667605600.0 | 22225352.0 | LT25 1 1.fq.gz | 0:150 1:150 | A:1740379719;C:1600230796;G:1601983926;T:1724655312;N:355847 | 150 | 150 | 1740379719 | 1600230796 | 1601983926 | 1724655312 | 355847 | SRX13373013 | SRS11277333 | SRA1341542 | Chinese Academy of Sciences|RESEARCH CENTER FOR ECO-ENVIRONMENTAL SCIENCES | Chinese Academy of Sciences | 2 | 0.95447 | 0.9529 | 0.0792 | 0.07864 | 0.65498 | 0.65502 | 0.48602 | 0.48538 | 150 | 150 | B | B | biological fallback assumption | illumina | novaseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | China | 2021-12-10 | Larval | Larval | Trunk | Surface Structure |