run_metadata: 67538
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67538 | SRR17191187 | SRX13373020 | SRS11277342 | SRP350168 | PRJNA787741 | The effects of tire wear particles on zebrafish eyes | PRJNA787741 | Other | The RNA sequencing data provides biomarkers for the phototransduction dysfunction induced by the tire wear particles | LM100 1 | LM100 1 | isolate:larvae|age:5 days|sex:not determined|tissue:whole body7|BioSampleModel:Model organism or animal | RNA Seq of Danio rerio larvea | LM100 1 | LM100 1 | The cDNA librarie was constructed from zebrafish larvae treated by high concentration road particle leachate for 5 days. The libraries were sequenced using an Illumina Novaseq 6003 platform. | RNA-Seq | TRANSCRIPTOMIC | PolyA | PAIRED | ILLUMINA | Illumina NovaSeq 6000 | SRP350168 | LM100_1_1.fq.gz LM100_1_2.fq.gz | fastq fastq | 6678576600.0 | 22261922.0 | LM100 1 1.fq.gz | 0:150 1:150 | A:1773351023;C:1578046234;G:1574674518;T:1752136583;N:368242 | 150 | 150 | 1773351023 | 1578046234 | 1574674518 | 1752136583 | 368242 | SRX13373020 | SRS11277342 | SRA1341542 | Chinese Academy of Sciences|RESEARCH CENTER FOR ECO-ENVIRONMENTAL SCIENCES | Chinese Academy of Sciences | 2 | 0.95268 | 0.94949 | 0.08246 | 0.0821 | 0.65744 | 0.66011 | 0.49051 | 0.49276 | 150 | 150 | B | B | biological fallback assumption | illumina | novaseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | China | 2021-12-10 | Larval | Larval | Trunk | Surface Structure |