run_metadata: 67536
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67536 | SRR17191185 | SRX13373022 | SRS11277346 | SRP350168 | PRJNA787741 | The effects of tire wear particles on zebrafish eyes | PRJNA787741 | Other | The RNA sequencing data provides biomarkers for the phototransduction dysfunction induced by the tire wear particles | LM100 3 | LM100 3 | isolate:larvae|age:5 days|sex:not determined|tissue:whole body9|BioSampleModel:Model organism or animal | RNA Seq of Danio rerio larvea | LM100 3 | LM100 3 | The cDNA librarie was constructed from zebrafish larvae treated by high concentration road particle leachate for 5 days. The libraries were sequenced using an Illumina Novaseq 6005 platform. | RNA-Seq | TRANSCRIPTOMIC | PolyA | PAIRED | ILLUMINA | Illumina NovaSeq 6000 | SRP350168 | LM100_3_1.fq.gz LM100_3_2.fq.gz | fastq fastq | 6993427200.0 | 23311424.0 | LM100 3 1.fq.gz | 0:150 1:150 | A:1840660966;C:1658361838;G:1666920090;T:1827424421;N:59885 | 150 | 150 | 1840660966 | 1658361838 | 1666920090 | 1827424421 | 59885 | SRX13373022 | SRS11277346 | SRA1341542 | Chinese Academy of Sciences|RESEARCH CENTER FOR ECO-ENVIRONMENTAL SCIENCES | Chinese Academy of Sciences | 2 | 0.95677 | 0.95477 | 0.06791 | 0.06756 | 0.65531 | 0.6552 | 0.49085 | 0.49017 | 150 | 150 | B | B | biological fallback assumption | illumina | novaseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | China | 2021-12-10 | Larval | Larval | Trunk | Surface Structure |