run_metadata: 66810
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66810 | SRR16647490 | SRX12848198 | SRS10791664 | SRP343938 | PRJNA776643 | RNAseq study for assessed the microcystin LR and geosmin differential gene expression modulation in zebrafish larvae 30 dph | PRJNA776643 | Other | Microcystin LR and Geosmin effects over whole body zebrafish Danio rerio larvae transcriptome | Cyanotoxins exposition | Cyanotoxins | strain:Wild|dev stage:31 dph|sex:Not collected|tissue:whole body|BioSampleModel:Model organism or animal | Control Group | Control4 | Control4 | TruSeq stranded mRNA library | RNA-Seq | TRANSCRIPTOMIC | RANDOM | PAIRED | ILLUMINA | Illumina NovaSeq 6000 | SRP343938 | Control_9_1.fastq.gz Control_9_2.fastq.gz | fastq fastq | 4929324190.0 | 24402595.0 | Control 9 1.fastq.gz | 0:101 1:101 | A:1284447529;C:1179260179;G:1182075889;T:1283482794;N:57799 | 101 | 101 | 1284447529 | 1179260179 | 1182075889 | 1283482794 | 57799 | SRX12848198 | SRS10791664 | SRA1320158 | University of Chile|INTA | University of Chile | 2 | 0.96315 | 0.96562 | 0.0579 | 0.05684 | 0.6872 | 0.6854 | 0.4698 | 0.47885 | 101 | 101 | B | B | biological fallback assumption | illumina | novaseq_era | unknown | random_priming | trueseq | bulk | unknown | unknown | Chile | 2021-10-31 | Undetermined | Larval | Trunk | Surface Structure |