run_metadata: 62470
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62470 | SRR13203215 | SRX9636468 | SRS7836318 | SRP296520 | PRJNA682774 | starvation induced hepatic steatosis | PRJNA682774 | Other | A Model Construction of Starvation Induces Hepatic Steatosis and Transcriptome Analysis in Zebrafish larvae | fs | strain:AB line|isolate:F0|breed:animals|cultivar:fish|ecotype:normal|age:5 dpf|dev stage:larval stage|sex:n1|tissue:whole fish|BioSampleModel:Model organism or animal | starvation induced heaptic steatosis | MJ20200831181 | MJ20200831181 | normal fed vs fast | RNA-Seq | TRANSCRIPTOMIC | PCR | PAIRED | ILLUMINA | Illumina HiSeq 4000 | SRP296520 | f1.R1.fastq.gz f1.R2.fastq.gz f2.R1.fastq.gz f2.R2.fastq.gz f3.R1.fastq.gz f3.R2.fastq.gz s1.R1.fastq.gz s1.R2.fastq.gz | fastq fastq fastq fastq fastq fastq fastq fastq | 29129211888.0 | 96454344.0 | f1.R1.fastq.gz | 0:151 1:151 | A:7606018564;C:6909639030;G:7057191016;T:7555822038;N:541240 | 151 | 151 | 7606018564 | 6909639030 | 7057191016 | 7555822038 | 541240 | SRX9636468 | SRS7836318 | SRA1167521 | Southwest University|College of Fisheries | Southwest University | 2 | 0.94626 | 0.94685 | 0.0543 | 0.05418 | 0.70609 | 0.70457 | 0.53227 | 0.53524 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | random_priming | unknown | bulk | unknown | unknown | China | 2020-12-06 | Larval | Larval | Whole Organism | All anatomical structures |