run_metadata: 61781
This data as json
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| 61781 | SRR13015647 | SRX9466589 | SRS7678748 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | body tissue of parents from cross 1 | male cross 1 adult body transcriptome | strain:AB wildtype|dev stage:adult|sex:male|tissue:body|embryos derived by cross:single cross 1|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq body zebrafish male from single cross 1 lane1 | PJ KH 034 1 | PJ KH 034 1 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_034_S34_L003_R1_001.fastq.gz PJ_KH_034_S34_L003_R2_001.fastq.gz | fastq fastq | 7674468092.0 | 25412146.0 | PJ KH 034 S34 L003 R1 001.fastq.gz | 0:151 1:151 | A:1959722716;C:1874876878;G:1930984650;T:1907843658;N:1040190 | 151 | 151 | 1959722716 | 1874876878 | 1930984650 | 1907843658 | 1040190 | SRX9466589 | SRS7678748 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.96342 | 0.9657 | 0.03463 | 0.03334 | 0.72638 | 0.73196 | 0.49758 | 0.50234 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Adult | Adult | Trunk | Surface Structure |