run_metadata: 61780
This data as json
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| 61780 | SRR13015646 | SRX9466590 | SRS7678748 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | body tissue of parents from cross 1 | male cross 1 adult body transcriptome | strain:AB wildtype|dev stage:adult|sex:male|tissue:body|embryos derived by cross:single cross 1|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq body zebrafish male from single cross 1 lane2 | PJ KH 034 2 | PJ KH 034 2 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_034_S34_L004_R1_001.fastq.gz PJ_KH_034_S34_L004_R2_001.fastq.gz | fastq fastq | 7735112712.0 | 25612956.0 | PJ KH 034 S34 L004 R1 001.fastq.gz | 0:151 1:151 | A:1974870696;C:1890581361;G:1943734005;T:1924490964;N:1435686 | 151 | 151 | 1974870696 | 1890581361 | 1943734005 | 1924490964 | 1435686 | SRX9466590 | SRS7678748 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.96448 | 0.966 | 0.03488 | 0.03342 | 0.72594 | 0.72985 | 0.49998 | 0.49893 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Adult | Adult | Trunk | Surface Structure |