run_metadata: 61779
This data as json
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| 61779 | SRR13015645 | SRX9466591 | SRS7678749 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | body tissue of parents from cross 2 | female cross 2 adult body transcriptome | strain:AB wildtype|dev stage:adult|sex:female|tissue:body|embryos derived by cross:single cross 2|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq body zebrafish female from single cross 2 lane1 | PJ KH 035 1 | PJ KH 035 1 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_035_S35_L003_R1_001.fastq.gz PJ_KH_035_S35_L003_R2_001.fastq.gz | fastq fastq | 9366027774.0 | 31013337.0 | PJ KH 035 S35 L003 R1 001.fastq.gz | 0:151 1:151 | A:2391627126;C:2287177887;G:2335767866;T:2350185771;N:1269124 | 151 | 151 | 2391627126 | 2287177887 | 2335767866 | 2350185771 | 1269124 | SRX9466591 | SRS7678749 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.94406 | 0.94614 | 0.02757 | 0.02656 | 0.70968 | 0.71366 | 0.468 | 0.46571 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Adult | Adult | Trunk | Surface Structure |