run_metadata: 61773
This data as json
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| 61773 | SRR13015631 | SRX9466605 | SRS7678757 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | diencephalon female replicate 2 | diencephalon female.rep2 | strain:AB wildtype|dev stage:adult|sex:female|tissue:diencephalon|biological replicate:replicate 2|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA Seq of zebrafish brain: adult female dienecephalon Rep2 | 2f4 | 2f4 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | 2f4_S7_L005_R1_001.fastq.gz 2f4_S7_L005_R2_001.fastq.gz | fastq fastq | 5231040024.0 | 34414737.0 | 2f4 S7 L005 R1 001.fastq.gz | 0:76 1:76 | A:1224437928;C:1375777868;G:1402575923;T:1227269442;N:978863 | 76 | 76 | 1224437928 | 1375777868 | 1402575923 | 1227269442 | 978863 | SRX9466605 | SRS7678757 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.89078 | 0.92189 | 0.29515 | 0.30111 | 0.77496 | 0.77871 | 0.66352 | 0.69988 | 76 | 76 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Adult | Adult | Brain | Nervous System |