run_metadata: 61756
This data as json
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| 61756 | SRR13015614 | SRX9466622 | SRS7678767 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | zebrafish embryos 2 hpf | single cross 2 2hpf.rep1 | strain:AB wildtype|dev stage:2 hpf|sex:unknown|tissue:whole embryo|embryos derived by cross:single cross 2|biological replicate:replicate 1|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq of whole zebrafish embryos wildtype AB 2 hpf single cross 2 Rep1 lane2 | PJ KH 007 2 | PJ KH 007 2 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_007_S7_L002_R1_001.fastq.gz PJ_KH_007_S7_L002_R2_001.fastq.gz | fastq fastq | 6160986334.0 | 20400617.0 | PJ KH 007 S7 L002 R1 001.fastq.gz | 0:151 1:151 | A:1624975321;C:1460650320;G:1497988384;T:1576186704;N:1185605 | 151 | 151 | 1624975321 | 1460650320 | 1497988384 | 1576186704 | 1185605 | SRX9466622 | SRS7678767 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.93793 | 0.93613 | 0.029 | 0.02834 | 0.78007 | 0.78149 | 0.48163 | 0.47853 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Cleavage | Embryo | Whole Organism | All anatomical structures |