run_metadata: 61755
This data as json
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| 61755 | SRR13015613 | SRX9466623 | SRS7678768 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | zebrafish embryos 2 hpf | single cross 2 2hpf.rep2 | strain:AB wildtype|dev stage:2 hpf|sex:unknown|tissue:whole embryo|embryos derived by cross:single cross 2|biological replicate:replicate 2|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq of whole zebrafish embryos wildtype AB 2 hpf single cross 2 Rep2 lane1 | PJ KH 008 1 | PJ KH 008 1 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_008_S8_L001_R1_001.fastq.gz PJ_KH_008_S8_L001_R2_001.fastq.gz | fastq fastq | 6363247210.0 | 21070355.0 | PJ KH 008 S8 L001 R1 001.fastq.gz | 0:151 1:151 | A:1672112192;C:1511346110;G:1545343107;T:1632829951;N:1615850 | 151 | 151 | 1672112192 | 1511346110 | 1545343107 | 1632829951 | 1615850 | SRX9466623 | SRS7678768 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.94358 | 0.94011 | 0.02245 | 0.02095 | 0.7781 | 0.78044 | 0.47784 | 0.47652 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Cleavage | Embryo | Whole Organism | All anatomical structures |