run_metadata: 61747
This data as json
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| 61747 | SRR13015605 | SRX9466631 | SRS7678772 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | zebrafish embryos 4 hpf | single cross 2 4hpf.rep1 | strain:AB wildtype|dev stage:4 hpf|sex:unknown|tissue:whole embryo|embryos derived by cross:single cross 2|biological replicate:replicate 1|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq of whole zebrafish embryos wildtype AB 4 hpf single cross 2 Rep1 lane2 | PJ KH 011 2 | PJ KH 011 2 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_011_S11_L002_R1_001.fastq.gz PJ_KH_011_S11_L002_R2_001.fastq.gz | fastq fastq | 6431481996.0 | 21296298.0 | PJ KH 011 S11 L002 R1 001.fastq.gz | 0:151 1:151 | A:1722060635;C:1495393940;G:1549727050;T:1663054022;N:1246349 | 151 | 151 | 1722060635 | 1495393940 | 1549727050 | 1663054022 | 1246349 | SRX9466631 | SRS7678772 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.91768 | 0.91808 | 0.03243 | 0.03158 | 0.75592 | 0.75783 | 0.48694 | 0.48402 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Blastula | Embryo | Whole Organism | All anatomical structures |