run_metadata: 61730
This data as json
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| 61730 | SRR13015588 | SRX9466648 | SRS7678781 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | zebrafish embryos 72hpf head | single cross 1 72hpf head.rep1 | strain:AB wildtype|dev stage:72 hpf|sex:unknown|tissue:head|embryos derived by cross:single cross 1|biological replicate:replicate 1|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq of whole zebrafish embryos wildtype AB 72 hpf head single cross 1 Rep1 lane1 | PJ KH 019 1 | PJ KH 019 1 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_019_S19_L003_R1_001.fastq.gz PJ_KH_019_S19_L003_R2_001.fastq.gz | fastq fastq | 6448860284.0 | 21353842.0 | PJ KH 019 S19 L003 R1 001.fastq.gz | 0:151 1:151 | A:1772421932;C:1455472902;G:1504524766;T:1715573168;N:867516 | 151 | 151 | 1772421932 | 1455472902 | 1504524766 | 1715573168 | 867516 | SRX9466648 | SRS7678781 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.9419 | 0.9441 | 0.12553 | 0.12393 | 0.65963 | 0.66257 | 0.46785 | 0.46982 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Larval | Larval | Head | Nervous System |