run_metadata: 61718
This data as json
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| 61718 | SRR13015576 | SRX9466660 | SRS7678787 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | zebrafish embryos 72hpf body | single cross 2 72hpf body.rep1 | strain:AB wildtype|dev stage:72 hpf|sex:unknown|tissue:body|embryos derived by cross:single cross 2|biological replicate:replicate 1|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq of whole zebrafish embryos wildtype AB 72 hpf body single cross 2 Rep2 lane2 | PJ KH 024 2 | PJ KH 024 2 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_024_S24_L004_R1_001.fastq.gz PJ_KH_024_S24_L004_R2_001.fastq.gz | fastq fastq | 6944611404.0 | 22995402.0 | PJ KH 024 S24 L004 R1 001.fastq.gz | 0:151 1:151 | A:1759014075;C:1717423563;G:1761324888;T:1705559501;N:1289377 | 151 | 151 | 1759014075 | 1717423563 | 1761324888 | 1705559501 | 1289377 | SRX9466660 | SRS7678787 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.94444 | 0.94481 | 0.02306 | 0.02202 | 0.80109 | 0.8043 | 0.44217 | 0.42367 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Larval | Larval | Trunk | Surface Structure |