run_metadata: 61717
This data as json
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| 61717 | SRR13015575 | SRX9466661 | SRS7678788 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | zebrafish embryos 72hpf head | single cross 2 72hpf head.rep2 | strain:AB wildtype|dev stage:72 hpf|sex:unknown|tissue:head|embryos derived by cross:single cross 2|biological replicate:replicate 2|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq of whole zebrafish embryos wildtype AB 72 hpf head single cross 2 Rep2 lane1 | PJ KH 025 1 | PJ KH 025 1 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_025_S25_L003_R1_001.fastq.gz PJ_KH_025_S25_L003_R2_001.fastq.gz | fastq fastq | 5975225530.0 | 19785515.0 | PJ KH 025 S25 L003 R1 001.fastq.gz | 0:151 1:151 | A:1575693310;C:1413843218;G:1467480556;T:1517391851;N:816595 | 151 | 151 | 1575693310 | 1413843218 | 1467480556 | 1517391851 | 816595 | SRX9466661 | SRS7678788 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.83685 | 0.83734 | 0.08376 | 0.08206 | 0.67452 | 0.67738 | 0.47208 | 0.46848 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Larval | Larval | Head | Nervous System |