run_metadata: 61714
This data as json
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| 61714 | SRR13015572 | SRX9466664 | SRS7678789 | SRP291905 | PRJNA674002 | A to I RNA editing in zebrafish during development | PRJNA674002 | Other | Here we investigated A to I RNA editing in early zebrafish development and in the adult brain. Raw unmapped sequencing output from stranded mRNA libraries can be found under this accession. | zebrafish embryos 72hpf body | single cross 2 72hpf body.rep2 | strain:AB wildtype|dev stage:72 hpf|sex:unknown|tissue:body|embryos derived by cross:single cross 2|biological replicate:replicate 2|assay type:mRNA seq|BioSampleModel:Model organism or animal | mRNA seq of whole zebrafish embryos wildtype AB 72 hpf body single cross 2 Rep2 lane2 | PJ KH 026 2 | PJ KH 026 2 | stranded mRNA | RNA-Seq | TRANSCRIPTOMIC | Oligo-dT | PAIRED | ILLUMINA | Illumina HiSeq 2500 | SRP291905 | PJ_KH_026_S26_L004_R1_001.fastq.gz PJ_KH_026_S26_L004_R2_001.fastq.gz | fastq fastq | 5649479642.0 | 21830080.0 | PJ KH 026 S26 L004 R1 001.fastq.gz | 0:151.00 1:151 | A:1489202701;C:1340215887;G:1394009703;T:1424911003;N:1140348 | 151 | 151 | 1489202701 | 1340215887 | 1394009703 | 1424911003 | 1140348 | SRX9466664 | SRS7678789 | SRA1153075 | MDC Berlin|BIMSB | MDC Berlin | 2 | 0.94314 | 0.94507 | 0.06432 | 0.06324 | 0.73419 | 0.73756 | 0.43857 | 0.43838 | 151 | 151 | B | B | biological fallback assumption | illumina | hiseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | Germany | 2020-11-10 | Larval | Larval | Trunk | Surface Structure |