run_metadata: 52242
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52242 | SRR9047069 | SRX5823596 | SRS4751717 | SRP198207 | PRJNA542583 | Migrasomes provide regional cues for organ morphogenesis during zebrafish gastrulation | PRJNA542583 | Other | Our study shows that migrasomes are signaling organelles which provide specific biochemical information to coordinate organ morphogenesis. | stdMO PBS | stdMO PBS | strain:Tu|isolate:primary cell|dev stage:gastrulation|sex:not determined|tissue:embryo|collection date:2016 11 13|genotype:wild type|geo loc name:China: Beijing|sample type:embryos|BioSampleModel:Model organism or animal | tspan RNA seq | uniprot | uniprot | RNA seq | RNA-Seq | TRANSCRIPTOMIC | RANDOM | SINGLE | BGISEQ | BGISEQ-500 | SRP198207 | 161214_I137_FCHF7TTBBXX_L2_WHFISclfRAAARAAPEI-203_1.fq.gz | fastq | 633650654.0 | 12931646.0 | 161214 I137 FCHF7TTBBXX L2 WHFISclfRAAARAAPEI 203 1.fq.gz | 0:49 1:0 | A:165787428;C:152969494;G:145599180;T:169168973;N:125579 | 49 | 0 | 165787428 | 152969494 | 145599180 | 169168973 | 125579 | SRX5823596 | SRS4751717 | SRA885639 | Tsinghua University|School of Life Sciences | Tsinghua University | 1 | 0.93004 | 0.09559 | 0.753 | 0.47488 | 49 | B | usable mapping rate | bgi | bgi | unknown | random_priming | unknown | bulk | unknown | unknown | China | 2019-05-30 | Gastrula | Embryo | Embryo Imprecise | All anatomical structures |