run_metadata: 35508
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35508 | SRR32847800 | SRX28130280 | SRS24485193 | SRP572931 | PRJNA1241724 | Evaluating the Effects of Neburon Exposure on Ovarian Folliculogenesis Using Zebrafish and Mouse Granulosa Cell Line | PRJNA1241724 | Other | To explore the effect of neburon on the reproductive system of zebrafish females four ovaries of neburon and four ovaries of vehicle control were selected for transcriptome sequencing. | F0 0 1 | strain:AB|age:150 dpf|collection date:2023 03 08|geo loc name:China:Wuhan|sex:female|tissue:ovaries|treatment:Solvent control 0.01% DMSO|replicate:replicate=biological replicate 1|BioSampleModel:Model organism or animal | RNA Seq of danio rerio: adult female ovary | F0 0 1 | F0 0 1 | Solvent control | RNA-Seq | TRANSCRIPTOMIC | PolyA | PAIRED | ILLUMINA | Illumina NovaSeq 6000 | SRP572931 | F0_0_1_1.fq.gz F0_0_1_2.fq.gz | fastq fastq | 6741448200.0 | 22471494.0 | F0 0 1 1.fq.gz | 0:150 1:150 | A:1773536677;C:1594948330;G:1605028745;T:1767907203;N:27245 | 150 | 150 | 1773536677 | 1594948330 | 1605028745 | 1767907203 | 27245 | SRX28130280 | SRS24485193 | SRA2099841 | Xiamen University|School of Life Sciences | Xiamen University | 2 | 0.88124 | 0.88271 | 0.02386 | 0.02384 | 0.76382 | 0.76351 | 0.48919 | 0.48949 | 150 | 150 | B | B | biological fallback assumption | illumina | novaseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | China | 2025-03-25 | Adult | Adult | Gonad | Reproductive System |