run_metadata: 35504
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35504 | SRR32847796 | SRX28130284 | SRS24485198 | SRP572931 | PRJNA1241724 | Evaluating the Effects of Neburon Exposure on Ovarian Folliculogenesis Using Zebrafish and Mouse Granulosa Cell Line | PRJNA1241724 | Other | To explore the effect of neburon on the reproductive system of zebrafish females four ovaries of neburon and four ovaries of vehicle control were selected for transcriptome sequencing. | F0 10 1 | strain:AB|age:150 dpf|collection date:2023 03 08|geo loc name:China:Wuhan|sex:female|tissue:ovaries|treatment:10 μg/L neburon 0.01% DMSO|replicate:replicate=biological replicate 1|BioSampleModel:Model organism or animal | RNA Seq of danio rerio: adult female ovary | F0 10 1 | F0 10 1 | neburon exposure | RNA-Seq | TRANSCRIPTOMIC | PolyA | PAIRED | ILLUMINA | Illumina NovaSeq 6000 | SRP572931 | F0_10_1_1.fq.gz F0_10_1_2.fq.gz | fastq fastq | 6855193200.0 | 22850644.0 | F0 10 1 1.fq.gz | 0:150 1:150 | A:1839056548;C:1598965863;G:1602365208;T:1814777552;N:28029 | 150 | 150 | 1839056548 | 1598965863 | 1602365208 | 1814777552 | 28029 | SRX28130284 | SRS24485198 | SRA2099841 | Xiamen University|School of Life Sciences | Xiamen University | 2 | 0.93021 | 0.93183 | 0.02479 | 0.02475 | 0.75824 | 0.75751 | 0.48861 | 0.48782 | 150 | 150 | B | B | biological fallback assumption | illumina | novaseq_era | unknown | poly_a | unknown | bulk | unknown | unknown | China | 2025-03-25 | Adult | Adult | Gonad | Reproductive System |