run_metadata: 35459
This data as json
| rowid | run.accession | experiment.accession | sample.accession | study.accession | bioproject | study.title | study.alias | study.type | study.abstract | study.attributes | study.PMIDs | sample.description | sample.title | sample.alias | sample.centername | sample.attributes | GEOsample.title | GEOsample.dataprocessing | GEOsample.source | GEOsample.treatmentprotocol | GEOsample.extractprotocol | GEOsample.growthprotocol | GEOsample.characteristics | GEOsample.accession | experiment.title | experiment.alias | experiment.library_name | experiment.design_description | experiment.library_construction_protocol | experiment.attributes | experiment.library_strategy | experiment.library_source | experiment.library_selection | experiment.library_layout | experiment.platform | experiment.instrument_model | experiment.spot_descriptor | experiment.study_ref | run.title | run.attributes | run.filename | run.semantic_name | run.total_bases | run.total_spots | run.alias | run.read_lengths | run.base_counts | run.r1_length | run.r2_length | run.r3_length | run.r4_length | run.Acount | run.Ccount | run.Gcount | run.Tcount | run.Ncount | run.experiment | run.pool_member | submission.accession | submission.srasource | submission.bioprojectsource | seqdetective.n_mates | seqdetective.mapping_rate.mate1 | seqdetective.mapping_rate.mate2 | seqdetective.nofeature_rate.mate1 | seqdetective.nofeature_rate.mate2 | seqdetective.sparsity.mate1 | seqdetective.sparsity.mate2 | seqdetective.pos_strand_rate.mate1 | seqdetective.pos_strand_rate.mate2 | seqdetective.readlen.mate1 | seqdetective.readlen.mate2 | seqdetective.judgement.mate1 | seqdetective.judgement.mate2 | seqdetective.judgement.reason | platform_family | instrument_generation | read_bias | selection_class | prep_kit | sc_or_bulk | tech_class | technology | tech_variant | submission.bioprojectsource.country | earliest_date | devstage_curation | devstage_curation_coarse | tissue_curation | tissue_curation_coarse |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35459 | SRR32815447 | SRX28098904 | SRS24455825 | SRP572346 | PRJNA1240620 | The mechanism of maternal inheritance of glycolipid metabolism disorder in a zebrafish model of type 2 diabetes | PRJNA1240620 | Other | Q1Danio rerio | strain:Q1|age:96hpf|collection date:2023 12 20|geo loc name:China: Xiangyang|sex:missing|tissue:Tissue of juvenile fish|replicate:Q1|BioSampleModel:Model organism or animal | Q1 | Q1 | Q1 | Q1 | RNA-Seq | METATRANSCRIPTOMIC | cDNA | PAIRED | DNBSEQ | DNBSEQ-T7 | SRP572346 | Q1_1.fq.gz Q1_2.fq.gz | fastq fastq | 6725919900.0 | 22419733.0 | Q1 1.fq.gz | 0:150 1:150 | A:1845653740;C:1518697545;G:1530630124;T:1830938491;N:0 | 150 | 150 | 1845653740 | 1518697545 | 1530630124 | 1830938491 | 0 | SRX28098904 | SRS24455825 | SRA2098321 | Wuhan University of Science and Technology|School of Medicine | Wuhan University of Science and Technology | B | B | biological fallback assumption | bgi | bgi | unknown | cdna_unspecified | unknown | bulk | unknown | unknown | China | 2025-03-22 | Larval | Larval | Undetermined | Undetermined |