run_metadata: 34920
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34920 | SRR32390772 | SRX27723137 | SRS24115840 | SRP564820 | PRJNA1225415 | Lipid metabolism studies | PRJNA1225415 | Other | Effect of cyp27b1 knockout on gene expression in adipose tissue | cyp27b12 | strain:not applicable|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month of age|dev stage:Sexual maturity|collection date:2023 06 02|geo loc name:China:Wuhan|sex:female|tissue:Adipose tissue of cyp27b1 knockout zebrafish|replicate:replicate=Biological Replicate 5|BioSampleModel:Model organism or animal | RNA Seq of adipose tissue from wild type and cyp27b5 knockout zebrafish | cyp27b12 | cyp27b12 | Adipose tissue of zebrafish | RNA-Seq | TRANSCRIPTOMIC | cDNA | PAIRED | ILLUMINA | Illumina HiSeq 4000 | SRP564820 | L1EHF0502911--cyp27b12.R1.raw.fastq.gz L1EHF0502911--cyp27b12.R2.raw.fastq.gz | fastq fastq | 6539341296.0 | 21653448.0 | L1EHF0502911 cyp27b12.R1.raw.fastq.gz | 0:151 1:151 | A:1683767731;C:1537831452;G:1625315620;T:1687496025;N:4930468 | 151 | 151 | 1683767731 | 1537831452 | 1625315620 | 1687496025 | 4930468 | SRX27723137 | SRS24115840 | SRA2079844 | Huazhong Agricultural University|College of Fisheries | Huazhong Agricultural University | B | B | biological fallback assumption | illumina | hiseq_era | unknown | cdna_unspecified | unknown | bulk | unknown | unknown | China | 2025-02-18 | Adult | Adult | Adipose Tissue | Adipose Tissue |