run_metadata: 33609
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33609 | SRR30247666 | SRX25709110 | SRS22350227 | SRP526520 | PRJNA1148340 | RNA Seq analyses of hey2 mutant and wild type sibling zebrafish hearts | PRJNA1148340 | Other | To assess the effects of Hey2 deficiency we performed transcriptome analyses of hey2 mutant and wild type sibling zebrafish hearts at 3 mpf. | RNA Seq for hey25nt / mutant zebrafish hearts at 3 mpf rep3 | KO3 | strain:not applicable|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:not applicable|collection date:not applicable|geo loc name:not applicable|sex:male and female|tissue:Heart|ID:OE replicate 3|BioSampleModel:Model organism or animal | RNA Seq for hey25nt / mutant zebrafish hearts at 3 mpf rep3 | hey25nt / replicate 3 | hey25nt / replicate 3 | RNA Seq for hey25nt / mutant zebrafish hearts at 3 mpf replicate 3 | RNA-Seq | TRANSCRIPTOMIC | PCR | PAIRED | BGISEQ | BGISEQ-500 | SRP526520 | KO_3_1.fq.gz KO_3_2.fq.gz | fastq fastq | 6793426200.0 | 22644754.0 | KO 3 1.fq.gz | 0:150 1:150 | A:1845779030;C:1550159613;G:1539592354;T:1857860950;N:34253 | 150 | 150 | 1845779030 | 1550159613 | 1539592354 | 1857860950 | 34253 | SRX25709110 | SRS22350227 | SRA1948261 | East China Normal University|School of Life Sciences | East China Normal University | 2 | 0.94555 | 0.92523 | 0.0631 | 0.06139 | 0.76672 | 0.76968 | 0.56501 | 0.57019 | 150 | 150 | B | B | biological fallback assumption | bgi | bgi | unknown | random_priming | unknown | bulk | unknown | unknown | China | 2024-08-15 | Adult | Adult | Heart | Cardiovascular System |