run_metadata: 10057
This data as json
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10057 | ERR4691986 | ERX4613067 | ERS5216073 | ERP124560 | PRJEB40865 | RNA seq of zebrafish adult MCU mutant hearts | ena-STUDY-UCLA-16-10-2020-22:30:44:295-390 | Other | We generated a zebrafish mitochondrial calcium uniporter MCU mutant that is able to survive to maturity but exhibits cardiac function and structure defects. We used RNA seq to help understand the gene expression changes that occur in the adult MCU heart. | ENA FIRST PUBLIC:2020 12 10|ENA LAST UPDATE:2020 10 16 | zebrafish adult heart RNA | SAMEA7457890 | UCLA | ENA FIRST PUBLIC:2020 12 10T17:06:02Z|ENA LAST UPDATE:2020 10 16T22:30:48Z|External Id:SAMEA7457890|INSDC center name:UCLA|INSDC first public:2020 12 10T17:06:02Z|INSDC last update:2020 10 16T22:30:48Z|INSDC status:public|Submitter Id:mcu mutant 1|common name:zebrafish|dev stage:adult|sample name:mcu mutant 1|scientific name:Danio rerio|tissue type:heart | Illumina HiSeq 3000 sequencing | ena EXPERIMENT UCLA 16 10 2020 22:30:43:819 3 | unspecified | 1 | RNA-Seq | TRANSCRIPTOMIC | unspecified | SINGLE | ILLUMINA | Illumina HiSeq 3000 | ERP124560 | Illumina HiSeq 3000 sequencing | ENA FIRST PUBLIC:2020 12 10|ENA LAST UPDATE:2020 10 21 | MCU_1.fastq.gz | fastq | 1236033124.0 | 33559740.0 | ena RUN UCLA 16 10 2020 22:30:43:819 3 | 0:36.83 1:0 | A:348518065;C:293502111;G:279181983;T:313506799;N:1324166 | 36 | 0 | 348518065 | 293502111 | 279181983 | 313506799 | 1324166 | ERX4613067 | ERS5216073 | ERA2987364 | European Nucleotide Archive | University of California, Los Angeles, USA | 1 | 0.92798 | 0.07907 | 0.7697 | 0.5488 | 37 | B | usable mapping rate | illumina | hiseq_era | unknown | unknown | unknown | bulk | unknown | unknown | United States | 2020-10-16 | Adult | Adult | Heart | Cardiovascular System |