rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
36214,SRR33581822,SRX28811683,SRS25048556,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,Rg1 L3,,strain:Not collected|isolate:Rg1 L3|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:9|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Treatment,Rg1 L3,Rg1 L3,Treatment,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,D4_1.fq.gz D4_2.fq.gz,fastq fastq,6696495000.0,22321650.0,D4 1.fq.gz,0:150 1:150,A:1846856660;C:1513002602;G:1504866522;T:1831769216;N:0,150,150,,,1846856660,1513002602,1504866522,1831769216,0,SRX28811683,SRS25048556,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36215,SRR33581823,SRX28811682,SRS25048555,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,Rg1 L7,,strain:Not collected|isolate:Rg1 L7|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:8|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Treatment,Rg1 L7,Rg1 L7,Treatment,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,D2_1.fq.gz D2_2.fq.gz,fastq fastq,6666041700.0,22220139.0,D2 1.fq.gz,0:150 1:150,A:1845276816;C:1500512488;G:1492917547;T:1827334849;N:0,150,150,,,1845276816,1500512488,1492917547,1827334849,0,SRX28811682,SRS25048555,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36216,SRR33581824,SRX28811681,SRS25048554,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,Rg1 L5,,strain:Not collected|isolate:Rg1 L5|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:7|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Treatment,Rg1 L5,Rg1 L5,Treatment,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,D1_1.fq.gz D1_2.fq.gz,fastq fastq,6698296200.0,22327654.0,D1 1.fq.gz,0:150 1:150,A:1843962508;C:1518208646;G:1509450148;T:1826674898;N:0,150,150,,,1843962508,1518208646,1509450148,1826674898,0,SRX28811681,SRS25048554,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36217,SRR33581825,SRX28811680,SRS25048553,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,PN L7,,strain:Not collected|isolate:PN L7|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:6|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Model,PN L7,PN L7,Model,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,B3_1.fq.gz B3_2.fq.gz,fastq fastq,6611023200.0,22036744.0,B3 1.fq.gz,0:150 1:150,A:1823488173;C:1492231000;G:1485521400;T:1809782627;N:0,150,150,,,1823488173,1492231000,1485521400,1809782627,0,SRX28811680,SRS25048553,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36218,SRR33581826,SRX28811679,SRS25048552,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,PN L2,,strain:Not collected|isolate:PN L2|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:5|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Model,PN L2,PN L2,Model,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,B2_1.fq.gz B2_2.fq.gz,fastq fastq,6673419600.0,22244732.0,B2 1.fq.gz,0:150 1:150,A:1853555661;C:1496204062;G:1487686506;T:1835973371;N:0,150,150,,,1853555661,1496204062,1487686506,1835973371,0,SRX28811679,SRS25048552,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36219,SRR33581827,SRX28811678,SRS25048551,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,PN L4,,strain:Not collected|isolate:PN L4|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:4|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Model,PN L4,PN L4,Model,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,B1_1.fq.gz B1_2.fq.gz,fastq fastq,6654915300.0,22183051.0,B1 1.fq.gz,0:150 1:150,A:1864666474;C:1477163584;G:1469026869;T:1844058373;N:0,150,150,,,1864666474,1477163584,1469026869,1844058373,0,SRX28811678,SRS25048551,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36220,SRR33581828,SRX28811677,SRS25048550,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,Con L1,,strain:Not collected|isolate:Con L1|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:3|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Control,Con L1,Con L1,Control,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,A3_1.fq.gz A3_2.fq.gz,fastq fastq,6805948200.0,22686494.0,A3 1.fq.gz,0:150 1:150,A:1865806598;C:1548653255;G:1540767459;T:1850720888;N:0,150,150,,,1865806598,1548653255,1540767459,1850720888,0,SRX28811677,SRS25048550,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36221,SRR33581829,SRX28811676,SRS25048549,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,Con Lb,,strain:Not collected|isolate:Con Lb|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:2|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Control,Con Lb,Con Lb,Control,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,A2_1.fq.gz A2_2.fq.gz,fastq fastq,6807123600.0,22690412.0,A2 1.fq.gz,0:150 1:150,A:1868554012;C:1546467202;G:1539322143;T:1852780243;N:0,150,150,,,1868554012,1546467202,1539322143,1852780243,0,SRX28811676,SRS25048549,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
36222,SRR33581830,SRX28811675,SRS25048548,SRP585544,PRJNA1263423,Ginsenoside Rg1 modulates key pathways in zebrafish with glucocorticoid induced osteoporosis,PRJNA1263423,Other,,,,,,Con La,,strain:Not collected|isolate:Con La|cultivar:Not collected|ecotype:Not collected|age:8 dpf stage:Larvae|collection date:2024 06 03|geo loc name:Not collected|sex:Not collected|tissue:Larvae|tmp:1|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Zebrafish: Control,Con La,Con La,,,,WGS,TRANSCRIPTOMIC,PolyA,PAIRED,DNBSEQ,DNBSEQ-G400,,SRP585544,,,A1_1.fq.gz A1_2.fq.gz,fastq fastq,6782914200.0,22609714.0,A1 1.fq.gz,0:150 1:150,A:1857557307;C:1544915899;G:1537431564;T:1843009430;N:0,150,150,,,1857557307,1544915899,1537431564,1843009430,0,SRX28811675,SRS25048548,SRA2130283,Hubei University of Medicine|Graduate school,Hubei University of Medicine,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2025-05-15,Larval,Larval,Undetermined,Undetermined
60823,SRR12494407,SRX8985926,SRS7239898,SRP278434,PRJNA658611,zebrafish starvation stress,PRJNA658611,Other,RNA Seq Analysis Reveals the Molecular Response Mechanisms in Zebrafish Larvae Undergoing Starvation During the Mouth opening Stage,,,,,sszf,,strain:AB line|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:8 days|dev stage:larval fish|sex:not determined|tissue:not collected|BioSampleModel:Model organism or animal,,,,,,,,,Transcriptome analysis reveals the role of exogenous feeding in regulating antioxidant defenses during the mouth opening stage in zebrafish larvae,821,821,RNA sequencing,,,WGS,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,ILLUMINA,Illumina HiSeq 2000,,SRP278434,,,Starved2-R2.R2.clean.fastq.gz Starved2-R1.R1.clean.fastq.gz Starved1-R2.R2.clean.fastq.gz Starved1-R1.R1.clean.fastq.gz Control2-R2.R2.clean.fastq.gz Control2-R1.R1.clean.fastq.gz Control1-R2.R2.clean.fastq.gz Control1-R1.R1.clean.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq,11815834250.0,47263337.0,Control1 R1.R1.clean.fastq.gz,0:125 1:125,A:2985063485;C:2935671076;G:2921346976;T:2973732805;N:19908,125,125,,,2985063485,2935671076,2921346976,2973732805,19908,SRX8985926,SRS7239898,SRA1115895,Southwest University|College of Animal Science and Technolgoy,Southwest University,2,0.9663,0.96526,0.05986,0.06116,0.70889,0.71108,0.50789,0.50441,125,125,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-08-21,Larval,Larval,Undetermined,Undetermined