rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
32923,SRR29498567,SRX25008885,SRS21709104,SRP515416,PRJNA1127032,Zebrafish Tissue Mid Range RNA Sequencing,PRJNA1127032,Other,This project sequenced mid size ranged RNA from zebrafish liver  brain  and gut tissues  using male and female parallel samples.,,,,,F2g,,strain:AB|age:adult|dev stage:adult|collection date:2020|geo loc name:Hungary|sex:female|tissue:gut|identifier:F2g|BioSampleModel:Model organism or animal,,,,,,,,,midRNA seq Danio rerio,10,10,Total RNA was extracted from different zebrafish tissues  using TRIzol reagent. RNA purity can be assesed by genomic DNA contamination minimized using DNase I and RNA Clean Up kit. post size selection our samples were sequenced with Illumina technology.,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP515416,,,F2g_R2.fq.gz F2g_R1.fq.gz,fastq fastq,9101949000.0,30339830.0,F2g R1.fq.gz,0:150 1:150,A:2052853923;C:2394247721;G:2773304460;T:1881440199;N:102697,150,150,,,2052853923,2394247721,2773304460,1881440199,102697,SRX25008885,SRS21709104,SRA1905460,Eotvos Lorand University|Genetics,Eotvos Lorand University,2,0.65449,0.37434,0.04313,0.12258,0.99519,0.99527,0.61425,0.56139,150,150,B,B,mate2-mate1 similar by mapping diff,illumina,novaseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Hungary,2024-06-22,Adult,Adult,Gut,Digestive System
32924,SRR29498568,SRX25008884,SRS21709103,SRP515416,PRJNA1127032,Zebrafish Tissue Mid Range RNA Sequencing,PRJNA1127032,Other,This project sequenced mid size ranged RNA from zebrafish liver  brain  and gut tissues  using male and female parallel samples.,,,,,F1g,,strain:AB|age:adult|dev stage:adult|collection date:2020|geo loc name:Hungary|sex:female|tissue:gut|identifier:F1g|BioSampleModel:Model organism or animal,,,,,,,,,midRNA seq Danio rerio,09,09,Total RNA was extracted from different zebrafish tissues  using TRIzol reagent. RNA purity can be assesed by genomic DNA contamination minimized using DNase I and RNA Clean Up kit. post size selection our samples were sequenced with Illumina technology.,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP515416,,,F1g_R1.fq.gz F1g_R2.fq.gz,fastq fastq,8132653500.0,27108845.0,F1g R1.fq.gz,0:150 1:150,A:1811779602;C:2095863397;G:2529881799;T:1695036688;N:92014,150,150,,,1811779602,2095863397,2529881799,1695036688,92014,SRX25008884,SRS21709103,SRA1905460,Eotvos Lorand University|Genetics,Eotvos Lorand University,2,0.53909,0.24181,0.01966,0.04797,0.99598,0.99624,0.59302,0.62038,150,150,B,B,mate2-mate1 similar by mapping diff,illumina,novaseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Hungary,2024-06-22,Adult,Adult,Gut,Digestive System
32931,SRR29498575,SRX25008877,SRS21709096,SRP515416,PRJNA1127032,Zebrafish Tissue Mid Range RNA Sequencing,PRJNA1127032,Other,This project sequenced mid size ranged RNA from zebrafish liver  brain  and gut tissues  using male and female parallel samples.,,,,,M2g,,strain:AB|age:adult|dev stage:adult|collection date:2020|geo loc name:Hungary|sex:male|tissue:gut|identifier:M2g|BioSampleModel:Model organism or animal,,,,,,,,,midRNA seq Danio rerio,12,12,Total RNA was extracted from different zebrafish tissues  using TRIzol reagent. RNA purity can be assesed by genomic DNA contamination minimized using DNase I and RNA Clean Up kit. post size selection our samples were sequenced with Illumina technology.,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP515416,,,M2g_R1.fq.gz M2g_R2.fq.gz,fastq fastq,7106243100.0,23687477.0,M2g R1.fq.gz,0:150 1:150,A:1567154123;C:1866065312;G:2213286944;T:1459656676;N:80045,150,150,,,1567154123,1866065312,2213286944,1459656676,80045,SRX25008877,SRS21709096,SRA1905460,Eotvos Lorand University|Genetics,Eotvos Lorand University,2,0.56476,0.25026,0.02259,0.04481,0.99667,0.99701,0.63277,0.65693,150,150,B,B,mate2-mate1 similar by mapping diff,illumina,novaseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Hungary,2024-06-22,Adult,Adult,Gut,Digestive System
32932,SRR29498576,SRX25008876,SRS21709095,SRP515416,PRJNA1127032,Zebrafish Tissue Mid Range RNA Sequencing,PRJNA1127032,Other,This project sequenced mid size ranged RNA from zebrafish liver  brain  and gut tissues  using male and female parallel samples.,,,,,M1g,,strain:AB|age:adult|dev stage:adult|collection date:2020|geo loc name:Hungary|sex:male|tissue:gut|identifier:M1g|BioSampleModel:Model organism or animal,,,,,,,,,midRNA seq Danio rerio,11,11,Total RNA was extracted from different zebrafish tissues  using TRIzol reagent. RNA purity can be assesed by genomic DNA contamination minimized using DNase I and RNA Clean Up kit. post size selection our samples were sequenced with Illumina technology.,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP515416,,,M1g_R2.fq.gz M1g_R1.fq.gz,fastq fastq,7351182000.0,24503940.0,M1g R1.fq.gz,0:150 1:150,A:1623685246;C:1858847576;G:2315396486;T:1553169371;N:83321,150,150,,,1623685246,1858847576,2315396486,1553169371,83321,SRX25008876,SRS21709095,SRA1905460,Eotvos Lorand University|Genetics,Eotvos Lorand University,2,0.96004,0.21521,0.16113,0.04578,0.92431,0.99143,0.61867,0.63432,150,150,B,T,mate2 technical by mapping diff,illumina,novaseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Hungary,2024-06-22,Adult,Adult,Gut,Digestive System