rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
50757,SRR8305610,SRX5120156,SRS4121979,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,AgeCtr5Month#3,,breed:zebrafish|age:154 days|sex:missing|tissue:whole heart|time point:Healthy5months|time replicate:AgeCtr5Month#3|BioSampleModel:Model organism or animal,,,,,,,,,Healthy 5months rep3 miRNA,8990,8990,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8990_S16_L008_R1_001.fastq.gz,fastq,698736950.0,13974739.0,SID8990 S16 L008 R1 001.fastq.gz,0:50,A:131989113;C:176394830;G:226656872;T:163673496;N:22639,50,,,,131989113,176394830,226656872,163673496,22639,SRX5120156,SRS4121979,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00317,,0.00059,,0.99632,,0.624,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50758,SRR8305611,SRX5120155,SRS4121983,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,AgeCtr45dpi#2,,breed:zebrafish|age:302 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy45dpi|time replicate:AgeCtr45dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr45dpi rep2 miRNA,8986,8986,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8986_S11_L007_R1_001.fastq.gz,fastq,167880450.0,3357609.0,SID8986 S11 L007 R1 001.fastq.gz,0:50,A:31714312;C:42386139;G:55132141;T:38634835;N:13023,50,,,,31714312,42386139,55132141,38634835,13023,SRX5120155,SRS4121983,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00595,,0.00101,,0.99685,,0.70197,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50759,SRR8305612,SRX5120154,SRS4121982,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,AgeCtr45dpi#3,,breed:zebrafish|age:302 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy45dpi|time replicate:AgeCtr45dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr45dpi rep3 miRNA,8987,8987,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8987_S12_L007_R1_001.fastq.gz,fastq,58209250.0,1164185.0,SID8987 S12 L007 R1 001.fastq.gz,0:50,A:11149995;C:14754333;G:18974261;T:13326125;N:4536,50,,,,11149995,14754333,18974261,13326125,4536,SRX5120154,SRS4121982,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00501,,0.00068,,0.99778,,0.66509,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50760,SRR8305613,SRX5120153,SRS4121976,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,120dpi#2,,breed:zebrafish|age:378 days|sex:missing|tissue:whole heart|time point:120 dpi|time replicate:120dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,120dpi rep2 miRNA,6025,6025,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6025_S29_L005_R1_001.fastq.gz,fastq,920379950.0,18407599.0,SID6025 S29 L005 R1 001.fastq.gz,0:50,A:197341487;C:229231195;G:273629822;T:220038506;N:138940,50,,,,197341487,229231195,273629822,220038506,138940,SRX5120153,SRS4121976,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01344,,0.00253,,0.99557,,0.74965,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50761,SRR8305614,SRX5120152,SRS4121978,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,120dpi#3,,breed:zebrafish|age:378 days|sex:missing|tissue:whole heart|time point:120 dpi|time replicate:120dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,120dpi rep3 miRNA,6026,6026,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6026_S26_L005_R1_001.fastq.gz,fastq,889209550.0,17784191.0,SID6026 S26 L005 R1 001.fastq.gz,0:50,A:185835825;C:227166683;G:267016163;T:209056255;N:134624,50,,,,185835825,227166683,267016163,209056255,134624,SRX5120152,SRS4121978,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02108,,0.00333,,0.9945,,0.72482,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50762,SRR8305615,SRX5120151,SRS4121975,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,60dpi#3,,breed:zebrafish|age:265 days|sex:missing|tissue:whole heart|time point:60 dpi|time replicate:60dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,60dpi rep3 miRNA,6023,6023,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6023_S25_L005_R1_001.fastq.gz,fastq,807865300.0,16157306.0,SID6023 S25 L005 R1 001.fastq.gz,0:50,A:178927964;C:196404816;G:231871602;T:200541868;N:119050,50,,,,178927964,196404816,231871602,200541868,119050,SRX5120151,SRS4121975,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01977,,0.00475,,0.99381,,0.76643,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50763,SRR8305616,SRX5120150,SRS4121977,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,120dpi#1,,breed:zebrafish|age:378 days|sex:missing|tissue:whole heart|time point:120 dpi|time replicate:120dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,120dpi rep1 miRNA,6024,6024,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6024_S27_L005_R1_001.fastq.gz,fastq,976958950.0,19539179.0,SID6024 S27 L005 R1 001.fastq.gz,0:50,A:207562906;C:245776777;G:289761611;T:233711355;N:146301,50,,,,207562906,245776777,289761611,233711355,146301,SRX5120150,SRS4121977,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.024,,0.00503,,0.99415,,0.68714,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50764,SRR8305617,SRX5120149,SRS4121973,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,60dpi#1,,breed:zebrafish|age:265 days|sex:missing|tissue:whole heart|time point:60 dpi|time replicate:60dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,60dpi rep1 miRNA,6021,6021,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6021_S30_L005_R1_001.fastq.gz,fastq,822399250.0,16447985.0,SID6021 S30 L005 R1 001.fastq.gz,0:50,A:179285741;C:203624280;G:242490523;T:196874923;N:123783,50,,,,179285741,203624280,242490523,196874923,123783,SRX5120149,SRS4121973,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00298,,0.00065,,0.99614,,0.7096,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50765,SRR8305618,SRX5120148,SRS4121974,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,60dpi#2,,breed:zebrafish|age:265 days|sex:missing|tissue:whole heart|time point:60 dpi|time replicate:60dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,60dpi rep2 miRNA,6022,6022,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6022_S28_L005_R1_001.fastq.gz,fastq,1185285550.0,23705711.0,SID6022 S28 L005 R1 001.fastq.gz,0:50,A:263566408;C:289358565;G:345225328;T:286957646;N:177603,50,,,,263566408,289358565,345225328,286957646,177603,SRX5120148,SRS4121974,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00543,,0.00143,,0.99655,,0.72969,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50766,SRR8305619,SRX5120147,SRS4121969,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,45dpi#2,,breed:zebrafish|age:302 days|sex:missing|tissue:whole heart|time point:45 dpi|time replicate:45dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,45dpi rep2 miRNA,6019,6019,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6019_S24_L004_R1_001.fastq.gz,fastq,1665628850.0,33312577.0,SID6019 S24 L004 R1 001.fastq.gz,0:50,A:345040451;C:410823238;G:503499843;T:406069175;N:196143,50,,,,345040451,410823238,503499843,406069175,196143,SRX5120147,SRS4121969,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01832,,0.00329,,0.99381,,0.74442,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50767,SRR8305620,SRX5120146,SRS4121972,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,45dpi#3,,breed:zebrafish|age:302 days|sex:missing|tissue:whole heart|time point:45 dpi|time replicate:45dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,45dpi rep3 miRNA,6020,6020,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6020_S19_L004_R1_001.fastq.gz,fastq,1077141150.0,21542823.0,SID6020 S19 L004 R1 001.fastq.gz,0:50,A:209184554;C:272965854;G:342027609;T:252836621;N:126512,50,,,,209184554,272965854,342027609,252836621,126512,SRX5120146,SRS4121972,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02255,,0.0041,,0.9932,,0.70804,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50768,SRR8305621,SRX5120145,SRS4121971,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,30dpi#3,,breed:zebrafish|age:241 days|sex:missing|tissue:whole heart|time point:30 dpi|time replicate:30dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,30dpi rep3 miRNA,6017,6017,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6017_S22_L004_R1_001.fastq.gz,fastq,1471641150.0,29432823.0,SID6017 S22 L004 R1 001.fastq.gz,0:50,A:286808307;C:377070243;G:450396816;T:357191320;N:174464,50,,,,286808307,377070243,450396816,357191320,174464,SRX5120145,SRS4121971,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00948,,0.00145,,0.99261,,0.69419,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50769,SRR8305622,SRX5120144,SRS4121970,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,45dpi#1,,breed:zebrafish|age:302 days|sex:missing|tissue:whole heart|time point:45 dpi|time replicate:45dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,45dpi rep1 miRNA,6018,6018,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6018_S23_L004_R1_001.fastq.gz,fastq,1354764100.0,27095282.0,SID6018 S23 L004 R1 001.fastq.gz,0:50,A:268591138;C:340728679;G:421161801;T:324122996;N:159486,50,,,,268591138,340728679,421161801,324122996,159486,SRX5120144,SRS4121970,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.0221,,0.00361,,0.99371,,0.69289,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50770,SRR8305623,SRX5120143,SRS4121980,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,AgeCtr5Month#1,,breed:zebrafish|age:154 days|sex:missing|tissue:whole heart|time point:Healthy5months|time replicate:AgeCtr5Month#1|BioSampleModel:Model organism or animal,,,,,,,,,Healthy 5months rep1 miRNA,8988,8988,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8988_S14_L008_R1_001.fastq.gz,fastq,55133800.0,1102676.0,SID8988 S14 L008 R1 001.fastq.gz,0:50,A:10235345;C:14001041;G:17872491;T:13023101;N:1822,50,,,,10235345,14001041,17872491,13023101,1822,SRX5120143,SRS4121980,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01094,,0.00175,,0.98953,,0.60545,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50771,SRR8305624,SRX5120142,SRS4122008,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,1dpi#3,,breed:zebrafish|age:319 days|sex:missing|tissue:whole heart|time point:1 dpi|time replicate:1dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,1dpi rep3 miRNA,6002,6002,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6002_S5_L001_R1_001.fastq.gz,fastq,1578002200.0,31560044.0,SID6002 S5 L001 R1 001.fastq.gz,0:50,A:345828316;C:403094159;G:472136222;T:356835497;N:108006,50,,,,345828316,403094159,472136222,356835497,108006,SRX5120142,SRS4122008,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.07196,,0.01204,,0.98628,,0.6936,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50772,SRR8305625,SRX5120141,SRS4122009,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,1dpi#2,,breed:zebrafish|age:319 days|sex:missing|tissue:whole heart|time point:1 dpi|time replicate:1dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,1dpi rep2 miRNA,6001,6001,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6001_S4_L001_R1_001.fastq.gz,fastq,1234803500.0,24696070.0,SID6001 S4 L001 R1 001.fastq.gz,0:50,A:251952768;C:310000103;G:374403246;T:298358838;N:88545,50,,,,251952768,310000103,374403246,298358838,88545,SRX5120141,SRS4122009,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.05028,,0.0095,,0.98837,,0.67564,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50773,SRR8305626,SRX5120140,SRS4122010,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,4dpi#2,,breed:zebrafish|age:220 days|sex:missing|tissue:whole heart|time point:4 dpi|time replicate:4dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,4dpi rep2 miRNA,6004,6004,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6004_S8_L002_R1_001.fastq.gz,fastq,1250169750.0,25003395.0,SID6004 S8 L002 R1 001.fastq.gz,0:50,A:240593316;C:315540319;G:393819940;T:300120501;N:95674,50,,,,240593316,315540319,393819940,300120501,95674,SRX5120140,SRS4122010,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02656,,0.00415,,0.99155,,0.62344,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50774,SRR8305627,SRX5120139,SRS4122011,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,4dpi#1,,breed:zebrafish|age:220 days|sex:missing|tissue:whole heart|time point:4 dpi|time replicate:4dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,4dpi rep1 miRNA,6003,6003,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6003_S7_L002_R1_001.fastq.gz,fastq,1563660750.0,31273215.0,SID6003 S7 L002 R1 001.fastq.gz,0:50,A:314953051;C:395817158;G:476754857;T:376018422;N:117262,50,,,,314953051,395817158,476754857,376018422,117262,SRX5120139,SRS4122011,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.04092,,0.00568,,0.9895,,0.69059,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50775,SRR8305628,SRX5120138,SRS4122004,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,sham#2,,breed:zebrafish|age:288 days|sex:missing|tissue:whole heart|time point:sham|time replicate:sham#2|BioSampleModel:Model organism or animal,,,,,,,,,sham rep2 miRNA,5998,5998,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID5998_S6_L001_R1_001.fastq.gz,fastq,1588288100.0,31765762.0,SID5998 S6 L001 R1 001.fastq.gz,0:50,A:342796715;C:390105841;G:464467318;T:390803929;N:114297,50,,,,342796715,390105841,464467318,390803929,114297,SRX5120138,SRS4122004,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.03765,,0.00775,,0.99371,,0.71003,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50776,SRR8305629,SRX5120137,SRS4122005,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,sham#1,,breed:zebrafish|age:288 days|sex:missing|tissue:whole heart|time point:sham|time replicate:sham#1|BioSampleModel:Model organism or animal,,,,,,,,,sham rep1 miRNA,5997,5997,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID5997_S1_L005_R1_001.fastq.gz,fastq,1551989700.0,31039794.0,SID5997 S1 L005 R1 001.fastq.gz,0:50,A:322274392;C:384135688;G:460825098;T:384698486;N:56036,50,,,,322274392,384135688,460825098,384698486,56036,SRX5120137,SRS4122005,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.0173,,0.00355,,0.99571,,0.71717,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50777,SRR8305630,SRX5120136,SRS4122006,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,1dpi#1,,breed:zebrafish|age:319 days|sex:missing|tissue:whole heart|time point:1 dpi|time replicate:1dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,1dpi rep1 miRNA,6000,6000,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6000_S3_L001_R1_001.fastq.gz,fastq,1782388700.0,35647774.0,SID6000 S3 L001 R1 001.fastq.gz,0:50,A:346286113;C:454398380;G:577494456;T:404083801;N:125950,50,,,,346286113,454398380,577494456,404083801,125950,SRX5120136,SRS4122006,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02786,,0.00537,,0.99103,,0.80383,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50778,SRR8305631,SRX5120135,SRS4122007,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,sham#3,,breed:zebrafish|age:288 days|sex:missing|tissue:whole heart|time point:sham|time replicate:sham#3|BioSampleModel:Model organism or animal,,,,,,,,,sham rep3 miRNA,5999,5999,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID5999_S2_L001_R1_001.fastq.gz,fastq,1062556900.0,21251138.0,SID5999 S2 L001 R1 001.fastq.gz,0:50,A:217053290;C:267053521;G:321242631;T:257131790;N:75668,50,,,,217053290,267053521,321242631,257131790,75668,SRX5120135,SRS4122007,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01276,,0.00266,,0.99206,,0.76992,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50779,SRR8305632,SRX5120134,SRS4121981,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,AgeCtr5Month#2,,breed:zebrafish|age:154 days|sex:missing|tissue:whole heart|time point:Healthy5months|time replicate:AgeCtr5Month#2|BioSampleModel:Model organism or animal,,,,,,,,,Healthy 5months rep2 miRNA,8989,8989,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8989_S15_L008_R1_001.fastq.gz,fastq,1238593550.0,24771871.0,SID8989 S15 L008 R1 001.fastq.gz,0:50,A:234342146;C:315041073;G:406169561;T:283000578;N:40192,50,,,,234342146,315041073,406169561,283000578,40192,SRX5120134,SRS4121981,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.0018,,0.00029,,0.99707,,0.75503,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50780,SRR8305633,SRX5120133,SRS4122012,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,7dpi#1,,breed:zebrafish|age:273 days|sex:missing|tissue:whole heart|time point:7 dpi|time replicate:7dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,7dpi rep1 miRNA,6006,6006,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6006_S10_L002_R1_001.fastq.gz,fastq,2236210750.0,44724215.0,SID6006 S10 L002 R1 001.fastq.gz,0:50,A:418358075;C:559212196;G:698422326;T:560042907;N:175246,50,,,,418358075,559212196,698422326,560042907,175246,SRX5120133,SRS4122012,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.03621,,0.00542,,0.99026,,0.6579,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2018-12-13,Adult,Adult,Heart,Cardiovascular System
50781,SRR8305634,SRX5120132,SRS4122013,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,4dpi#3,,breed:zebrafish|age:220 days|sex:missing|tissue:whole heart|time point:4 dpi|time replicate:4dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,4dpi rep3 miRNA,6005,6005,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6005_S9_L002_R1_001.fastq.gz,fastq,1055547700.0,21110954.0,SID6005 S9 L002 R1 001.fastq.gz,0:50,A:206864874;C:267418316;G:328346657;T:252837721;N:80132,50,,,,206864874,267418316,328346657,252837721,80132,SRX5120132,SRS4122013,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.03345,,0.00484,,0.99178,,0.62838,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50782,SRR8305635,SRX5120131,SRS4122001,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,AgeCtr45dpi#1,,breed:zebrafish|age:302 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy45dpi|time replicate:AgeCtr45dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr45dpi rep1 miRNA,8985,8985,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8985_S10_L007_R1_001.fastq.gz,fastq,157438950.0,3148779.0,SID8985 S10 L007 R1 001.fastq.gz,0:50,A:29907011;C:39967744;G:51803529;T:35747899;N:12767,50,,,,29907011,39967744,51803529,35747899,12767,SRX5120131,SRS4122001,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00551,,0.00091,,0.99758,,0.68992,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50783,SRR8305636,SRX5120130,SRS4122003,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,AgeCtr120dpi#3,,breed:zebrafish|age:378 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy120dpi|time replicate:AgeCtr120dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr120dpi rep3 miRNA,8984,8984,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8984_S8_L006_R1_001.fastq.gz,fastq,527926150.0,10558523.0,SID8984 S8 L006 R1 001.fastq.gz,0:50,A:100249504;C:134536518;G:170369710;T:122751228;N:19190,50,,,,100249504,134536518,170369710,122751228,19190,SRX5120130,SRS4122003,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00248,,0.00046,,0.99748,,0.67021,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50784,SRR8305637,SRX5120129,SRS4121987,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,AgeCtr160dpi#3,,breed:zebrafish|age:463 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy160dpi|time replicate:AgeCtr160dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr160dpi rep3 miRNA,8981,8981,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8981_S4_L005_R1_001.fastq.gz,fastq,461202550.0,9224051.0,SID8981 S4 L005 R1 001.fastq.gz,0:50,A:93413883;C:114608387;G:142367379;T:110796282;N:16619,50,,,,93413883,114608387,142367379,110796282,16619,SRX5120129,SRS4121987,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01441,,0.00274,,0.99579,,0.75424,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50785,SRR8305638,SRX5120128,SRS4121989,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,AgeCtr160dpi#2,,breed:zebrafish|age:463 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy160dpi|time replicate:AgeCtr160dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr160dpi rep2 miRNA,8980,8980,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8980_S3_L005_R1_001.fastq.gz,fastq,709335250.0,14186705.0,SID8980 S3 L005 R1 001.fastq.gz,0:50,A:139628736;C:176770611;G:222154342;T:170755378;N:26183,50,,,,139628736,176770611,222154342,170755378,26183,SRX5120128,SRS4121989,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01323,,0.00258,,0.99628,,0.8087,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50786,SRR8305639,SRX5120127,SRS4121984,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,AgeCtr120dpi#2,,breed:zebrafish|age:378 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy120dpi|time replicate:AgeCtr120dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr120dpi rep2 miRNA,8983,8983,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8983_S7_L006_R1_001.fastq.gz,fastq,110092850.0,2201857.0,SID8983 S7 L006 R1 001.fastq.gz,0:50,A:20832150;C:27890992;G:35337269;T:26028356;N:4083,50,,,,20832150,27890992,35337269,26028356,4083,SRX5120127,SRS4121984,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00659,,0.00124,,0.99464,,0.64092,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50787,SRR8305640,SRX5120126,SRS4121985,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,AgeCtr120dpi#1,,breed:zebrafish|age:378 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy120dpi|time replicate:AgeCtr120dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr120dpi rep1 miRNA,8982,8982,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8982_S6_L006_R1_001.fastq.gz,fastq,274783000.0,5495660.0,SID8982 S6 L006 R1 001.fastq.gz,0:50,A:51202860;C:70356196;G:89068979;T:64144960;N:10005,50,,,,51202860,70356196,89068979,64144960,10005,SRX5120126,SRS4121985,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00736,,0.00142,,0.99519,,0.67978,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50788,SRR8305641,SRX5120125,SRS4121991,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,160dpi#2,,breed:zebrafish|age:463 days|sex:missing|tissue:whole heart|time point:160 dpi|time replicate:160dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,160dpi rep2 miRNA,7273,7273,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID7273_S13_L008_R1_001.fastq.gz,fastq,1562494050.0,31249881.0,SID7273 S13 L008 R1 001.fastq.gz,0:50,A:322066209;C:401076329;G:458040591;T:381260838;N:50083,50,,,,322066209,401076329,458040591,381260838,50083,SRX5120125,SRS4121991,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.00546,,0.00063,,0.99758,,0.63443,,50,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50789,SRR8305642,SRX5120124,SRS4121992,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,160dpi#1,,breed:zebrafish|age:463 days|sex:missing|tissue:whole heart|time point:160 dpi|time replicate:160dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,160dpi rep1 miRNA,6754,6754,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6754_S12_L002_R1_001.fastq.gz,fastq,970614525.0,12941527.0,SID6754 S12 L002 R1 001.fastq.gz,0:75,A:226197330;C:263276797;G:244870748;T:236180457;N:89193,75,,,,226197330,263276797,244870748,236180457,89193,SRX5120124,SRS4121992,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,6e-05,,1e-05,,0.99985,,0.75,,75,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50790,SRR8305643,SRX5120123,SRS4121993,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,AgeCtr160dpi#1,,breed:zebrafish|age:463 days|sex:missing|tissue:whole heart|time point:AgeMatchHealthy160dpi|time replicate:AgeCtr160dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,AgeMatchCtr160dpi rep1 miRNA,8979,8979,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID8979_S2_L005_R1_001.fastq.gz,fastq,1191571700.0,23831434.0,SID8979 S2 L005 R1 001.fastq.gz,0:50,A:231936155;C:298463393;G:377425675;T:283702936;N:43541,50,,,,231936155,298463393,377425675,283702936,43541,SRX5120123,SRS4121993,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.01636,,0.00334,,0.99478,,0.78529,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50791,SRR8305644,SRX5120122,SRS4121990,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,160dpi#3,,breed:zebrafish|age:463 days|sex:missing|tissue:whole heart|time point:160 dpi|time replicate:160dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,160dpi rep3 miRNA,7274,7274,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID7274_S18_L003_R1_001.fastq.gz,fastq,587672100.0,7835628.0,SID7274 S18 L003 R1 001.fastq.gz,0:75,A:128228313;C:152211828;G:156460760;T:150725049;N:46150,75,,,,128228313,152211828,156460760,150725049,46150,SRX5120122,SRS4121990,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,9e-05,,1e-05,,0.99975,,0.46153,,75,,T,,under 1.2% mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50792,SRR8305645,SRX5120121,SRS4122000,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,21dpi#3,,breed:zebrafish|age:267 days|sex:missing|tissue:whole heart|time point:21 dpi|time replicate:21dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,21dpi rep3 miRNA,6014,6014,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6014_S18_L003_R1_001.fastq.gz,fastq,470984100.0,9419682.0,SID6014 S18 L003 R1 001.fastq.gz,0:50,A:90590892;C:122988758;G:143456400;T:113917917;N:30133,50,,,,90590892,122988758,143456400,113917917,30133,SRX5120121,SRS4122000,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02203,,0.00201,,0.99312,,0.39653,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2018-12-13,Adult,Adult,Heart,Cardiovascular System
50793,SRR8305646,SRX5120120,SRS4122002,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,21dpi#2,,breed:zebrafish|age:267 days|sex:missing|tissue:whole heart|time point:21 dpi|time replicate:21dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,21dpi rep2 miRNA,6013,6013,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6013_S17_L003_R1_001.fastq.gz,fastq,785630400.0,15712608.0,SID6013 S17 L003 R1 001.fastq.gz,0:50,A:152017861;C:201679585;G:240972325;T:190910430;N:50199,50,,,,152017861,201679585,240972325,190910430,50199,SRX5120120,SRS4122002,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02519,,0.00378,,0.99373,,0.40787,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50794,SRR8305647,SRX5120119,SRS4121999,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,21dpi#1,,breed:zebrafish|age:267 days|sex:missing|tissue:whole heart|time point:21 dpi|time replicate:21dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,21dpi rep1 miRNA,6012,6012,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6012_S16_L003_R1_001.fastq.gz,fastq,494552600.0,9891052.0,SID6012 S16 L003 R1 001.fastq.gz,0:50,A:95336093;C:129024365;G:149497515;T:120663807;N:30820,50,,,,95336093,129024365,149497515,120663807,30820,SRX5120119,SRS4121999,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.04208,,0.00538,,0.992,,0.61501,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50795,SRR8305648,SRX5120118,SRS4121998,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,14dpi#3,,breed:zebrafish|age:NA|sex:missing|tissue:whole heart|time point:14 dpi|time replicate:14dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,14dpi rep3 miRNA,6011,6011,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6011_S15_L003_R1_001.fastq.gz,fastq,578164050.0,11563281.0,SID6011 S15 L003 R1 001.fastq.gz,0:50,A:109934197;C:149003532;G:179264553;T:139924815;N:36953,50,,,,109934197,149003532,179264553,139924815,36953,SRX5120118,SRS4121998,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.0225,,0.00372,,0.9906,,0.61747,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Undetermined,Undetermined,Heart,Cardiovascular System
50796,SRR8305649,SRX5120117,SRS4121996,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,14dpi#2,,breed:zebrafish|age:NA|sex:missing|tissue:whole heart|time point:14 dpi|time replicate:14dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,14dpi rep2 miRNA,6010,6010,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6010_S14_L003_R1_001.fastq.gz,fastq,682820200.0,13656404.0,SID6010 S14 L003 R1 001.fastq.gz,0:50,A:132413613;C:177691857;G:213067602;T:159602931;N:44197,50,,,,132413613,177691857,213067602,159602931,44197,SRX5120117,SRS4121996,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02361,,0.00321,,0.99281,,0.46548,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Undetermined,Undetermined,Heart,Cardiovascular System
50797,SRR8305650,SRX5120116,SRS4121997,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,14dpi#1,,breed:zebrafish|age:NA|sex:missing|tissue:whole heart|time point:14 dpi|time replicate:14dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,14dpi rep1 miRNA,6009,6009,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6009_S5_L006_R1_001.fastq.gz,fastq,645018650.0,12900373.0,SID6009 S5 L006 R1 001.fastq.gz,0:50,A:121217579;C:170403284;G:199790376;T:153583951;N:23460,50,,,,121217579,170403284,199790376,153583951,23460,SRX5120116,SRS4121997,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.02637,,0.00359,,0.99095,,0.50364,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Undetermined,Undetermined,Heart,Cardiovascular System
50798,SRR8305651,SRX5120115,SRS4121994,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 3,,7dpi#3,,breed:zebrafish|age:273 days|sex:missing|tissue:whole heart|time point:7 dpi|time replicate:7dpi#3|BioSampleModel:Model organism or animal,,,,,,,,,7dpi rep3 miRNA,6008,6008,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6008_S11_L002_R1_001.fastq.gz,fastq,1016249900.0,20324998.0,SID6008 S11 L002 R1 001.fastq.gz,0:50,A:196023277;C:256234305;G:315577111;T:248336546;N:78661,50,,,,196023277,256234305,315577111,248336546,78661,SRX5120115,SRS4121994,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.03415,,0.00416,,0.98981,,0.66977,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50799,SRR8305652,SRX5120114,SRS4121995,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,7dpi#2,,breed:zebrafish|age:273 days|sex:missing|tissue:whole heart|time point:7 dpi|time replicate:7dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,7dpi rep2 miRNA,6007,6007,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6007_S12_L002_R1_001.fastq.gz,fastq,1405772250.0,28115445.0,SID6007 S12 L002 R1 001.fastq.gz,0:50,A:270753665;C:356955121;G:444759435;T:333191995;N:112034,50,,,,270753665,356955121,444759435,333191995,112034,SRX5120114,SRS4121995,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.0195,,0.00225,,0.99291,,0.65233,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2018-12-13,Adult,Adult,Heart,Cardiovascular System
50800,SRR8305653,SRX5120113,SRS4121986,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 2,,30dpi#2,,breed:zebrafish|age:241 days|sex:missing|tissue:whole heart|time point:30 dpi|time replicate:30dpi#2|BioSampleModel:Model organism or animal,,,,,,,,,30dpi rep2 miRNA,6016,6016,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6016_S21_L004_R1_001.fastq.gz,fastq,1317403300.0,26348066.0,SID6016 S21 L004 R1 001.fastq.gz,0:50,A:248382887;C:331301718;G:402502543;T:335061139;N:155013,50,,,,248382887,331301718,402502543,335061139,155013,SRX5120113,SRS4121986,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.05594,,0.00908,,0.98569,,0.68185,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System
50801,SRR8305654,SRX5120112,SRS4121988,SRP173044,PRJNA509429,Delineating the transcriptomic response during Zebrafish heart regeneration,PRJNA509429,Other,Sequencing data of both mRNA and microRNA were obtained to study the transcriptomic response during zebrafish heart regeneration. Samples were utilised in triplicates for each time point up to 160 xxx post injury. Furthermore  mRNA and miRNA were obtained from the same biological samples to allow correlation analysis.,,pubmed:30597924,Replicate 1,,30dpi#1,,breed:zebrafish|age:241 days|sex:missing|tissue:whole heart|time point:30 dpi|time replicate:30dpi#1|BioSampleModel:Model organism or animal,,,,,,,,,30dpi rep1 miRNA,6015,6015,miRNAs were extracted using miRNeasy Mini Kit Qiagen #217004 and used for library preparation with the TruSeq Small RNA Library Prep Illumina #20005613,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina HiSeq 2000,,SRP173044,,,SID6015_S20_L004_R1_001.fastq.gz,fastq,1342409800.0,26848196.0,SID6015 S20 L004 R1 001.fastq.gz,0:50,A:256149333;C:337592303;G:419179623;T:329329916;N:158625,50,,,,256149333,337592303,419179623,329329916,158625,SRX5120112,SRS4121988,SRA822004,University of Freiburg|Institute of Molecular Medicine and Cell Research,University of Freiburg DeCaRe,1,0.03123,,0.00479,,0.98999,,0.62344,,50,,B,,usable mapping rate,illumina,hiseq_era,unknown,small_rna,trueseq,bulk,unknown,unknown,,Germany,2019-04-30,Adult,Adult,Heart,Cardiovascular System