rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
39671,SRR2043046,SRX1041307,SRS947739,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 200nM  sample3,zebrafish at normal developmental age of 72hpf in the 200 nM HBCD rep3,HBCD 200nM 3,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:HBCD 200nM 3|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the 200 nM HBCD rep3,Sample  HBCD 200nM 3,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_HBCD_200nM-3.fastq.tar.gz,fastq,549695784.0,16657448.0,Sample  HBCD 200nM 3,0:33,A:120885057;C:120386921;G:146939259;T:161323403;N:161144,33,,,,120885057,120386921,146939259,161323403,161144,SRX1041307,SRS947739,SRA269780,MG,Xiamen University,1,0.13819,,0.03714,,0.94968,,0.52004,,33,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-09-18,Larval,Larval,Whole Organism,All anatomical structures
39672,SRR2043044,SRX1041306,SRS947738,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 200nM  sample2,zebrafish at normal developmental age of 72hpf in the 200 nM HBCD rep2,HBCD 200nM 2,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:HBCD 200nM 2|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the 2 nM HBCD rep2,Sample  HBCD 200nM 2,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_HBCD_200nM-2.fastq.tar.gz,fastq,566585217.0,17169249.0,Sample  HBCD 200nM 2,0:33,A:119904892;C:129504656;G:159539041;T:157545273;N:91355,33,,,,119904892,129504656,159539041,157545273,91355,SRX1041306,SRS947738,SRA269780,MG,Xiamen University,1,0.07072,,0.01837,,0.96246,,0.52439,,33,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-05-27,Larval,Larval,Whole Organism,All anatomical structures
39673,SRR2043035,SRX1041305,SRS947737,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 200nM  sample1,zebrafish at normal developmental age of 72hpf in the 200 nM HBCD rep1,HBCD 200nM 1,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:HBCD 200nM 1|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the 200 nM HBCD rep1,Sample  HBCD 200nM 1,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_HBCD_200nM-1.fastq.tar.gz,fastq,636936228.0,17692673.0,Sample  HBCD 200nM 1,0:36,A:138321201;C:126054708;G:184822056;T:187709777;N:28486,36,,,,138321201,126054708,184822056,187709777,28486,SRX1041305,SRS947737,SRA269780,MG,Xiamen University,1,0.04374,,0.0115,,0.97839,,0.29573,,36,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-09-18,Larval,Larval,Whole Organism,All anatomical structures
39674,SRR2043030,SRX1041276,SRS947712,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 2nM  sample3,zebrafish at normal developmental age of 72hpf in the 2 nM HBCD rep3,HBCD 2nM 3,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:HBCD 2nM 3|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the 200 nM HBCD rep3,Sample HBCD 2nM 3,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_HBCD_2nM-3.fastq.tar.gz,fastq,636936228.0,17692673.0,Sample HBCD 2nM 3,0:36,A:138321201;C:126054708;G:184822056;T:187709777;N:28486,36,,,,138321201,126054708,184822056,187709777,28486,SRX1041276,SRS947712,SRA269780,MG,Xiamen University,1,0.04377,,0.01174,,0.97812,,0.30675,,36,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-05-27,Larval,Larval,Whole Organism,All anatomical structures
39675,SRR2042999,SRX1041271,SRS947707,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 2nM  sample2,zebrafish at normal developmental age of 72hpf in the 2 nM HBCD rep2,HBCD 2nM 2,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:HBCD 2nM 2|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the 2 nM HBCD rep2,Sample HBCD 2nM 2,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_HBCD_2nM-2.fastq.tar.gz,fastq,482176476.0,13393791.0,Sample HBCD 2nM 2,0:36,A:104565872;C:92998014;G:137403437;T:147164823;N:44330,36,,,,104565872,92998014,137403437,147164823,44330,SRX1041271,SRS947707,SRA269780,MG,Xiamen University,1,0.0759,,0.02077,,0.97025,,0.33489,,36,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-09-18,Larval,Larval,Whole Organism,All anatomical structures
39676,SRR2040574,SRX1038901,SRS945650,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 2nM  sample1,zebrafish at normal developmental age of 72hpf in the 2 nM HBCD rep1,HBCD 2nM 1,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:HBCD 2nM 1|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the 2 nM HBCD rep1,Sample HBCD 2nM 1,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_HBCD_2nM-1.fastq.tar.gz,fastq,327925620.0,9109045.0,Sample HBCD 2nM 1,0:36,A:71167117;C:63917852;G:94874537;T:97936051;N:30063,36,,,,71167117,63917852,94874537,97936051,30063,SRX1038901,SRS945650,SRA269780,MG,Xiamen University,1,0.06484,,0.01622,,0.97459,,0.35746,,36,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-05-27,Larval,Larval,Whole Organism,All anatomical structures
39677,SRR2040573,SRX1038898,SRS945648,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 0nM  sample3,zebrafish at normal developmental age of 72hpf in the control rep3,control 3,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:control 3|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the control  rep3,Sample control 3,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>33</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_control-3.fastq.tar.gz,fastq,456812301.0,13842797.0,Sample control 3,0:33,A:99424011;C:100923631;G:121758068;T:134398048;N:308543,33,,,,99424011,100923631,121758068,134398048,308543,SRX1038898,SRS945648,SRA269780,MG,Xiamen University,1,0.14866,,0.03878,,0.95079,,0.53781,,33,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-09-18,Larval,Larval,Whole Organism,All anatomical structures
39678,SRR2040572,SRX1038893,SRS945643,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,HBCD 0nM  sample2,zebrafish at normal developmental age of 72hpf in the control rep2,control 2,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:control 2|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the control  rep2,Sample control 2,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>33</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,,,451846230.0,13692310.0,Sample control 2,0:33,A:100056403;C:97812076;G:121442936;T:132449348;N:85467,33,,,,100056403,97812076,121442936,132449348,85467,SRX1038893,SRS945643,SRA269780,MG,Xiamen University,1,0.06007,,0.01901,,0.96794,,0.4743,,33,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-05-27,Larval,Larval,Whole Organism,All anatomical structures
39679,SRR2040562,SRX1038887,SRS945623,SRP058729,PRJNA284830,MicroRNA expression changes during zebrafish Danio rerio development induced by hexabromocyclododecane,PRJNA284830,Whole Genome Sequencing,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0  2  20 and 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,,,Hexabromocyclododecane HBCD  one of the most widely used brominated flame retardants  has been found to cause toxic effects on animals. Although microRNAs miRNAs play an important role in many biological and metabolic processes  whether and how they are involved in the process of HBCD induced toxicity is largely unknown. In the present study  zebrafish embryos were exposed to HBCD at low concentrations of 0 2 20 200 nM. Subsequently  RNA was isolated from the embryo pool and the miRNAs expression profiles were analyzed using deep sequencing.,zebrafish at normal developmental age of 72hpf in the control rep1,control 1,,breed:zebrafish|strain:Wild type TU strain|age:72 hpf£¨hpf stage:embryo|sex:pooled male and female|tissue:whole zebrafish|treatment:control 1|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish at normal developmental age of 72hpf in the control  rep1,Sample control 1,1,1,,,miRNA-Seq,TRANSCRIPTOMIC,other,SINGLE,ILLUMINA,Illumina Genome Analyzer II,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>33</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP058729,,,Sample_control-1.fastq.tar.gz,fastq,398024253.0,12061341.0,Sample control 1,0:33,A:90133666;C:86672655;G:103932053;T:117192591;N:93288,33,,,,90133666,86672655,103932053,117192591,93288,SRX1038887,SRS945623,SRA269780,MG,Xiamen University,1,0.08082,,0.02367,,0.96106,,0.52033,,33,,B,,usable mapping rate,illumina,early_illumina,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2015-05-27,Larval,Larval,Whole Organism,All anatomical structures