rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 34115,SRR31230228,SRX26610547,SRS23109428,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,TF L1,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:TF|Replicate:1|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,TF L1,TF L1,TF,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,TF_L1_1.fq.gz TF_L1_2.fq.gz,fastq fastq,6687564300.0,22291881.0,TF L1 1.fq.gz,0:150 1:150,A:1864117630;C:1488483222;G:1497677628;T:1837006551;N:279269,150,150,,,1864117630,1488483222,1497677628,1837006551,279269,SRX26610547,SRS23109428,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34116,SRR31230229,SRX26610546,SRS23109427,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,HP L3,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:HP|Replicate:3|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,HP L3,HP L3,HP,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,HP_L3_1.fq.gz HP_L3_2.fq.gz,fastq fastq,6481773600.0,21605912.0,HP L3 1.fq.gz,0:150 1:150,A:1822457830;C:1426224217;G:1433346356;T:1799447632;N:297565,150,150,,,1822457830,1426224217,1433346356,1799447632,297565,SRX26610546,SRS23109427,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34117,SRR31230230,SRX26610545,SRS23109426,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,HP L2,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:HP|Replicate:2|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,HP L2,HP L2,HP,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,HP_L2_1.fq.gz HP_L2_2.fq.gz,fastq fastq,6483969900.0,21613233.0,HP L2 1.fq.gz,0:150 1:150,A:1858850647;C:1400634811;G:1393756557;T:1830424227;N:303658,150,150,,,1858850647,1400634811,1393756557,1830424227,303658,SRX26610545,SRS23109426,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34118,SRR31230231,SRX26610544,SRS23109422,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,HP L1,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:HP|Replicate:1|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,HP L1,HP L1,HP,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,HP_L1_1.fq.gz HP_L1_2.fq.gz,fastq fastq,6270987900.0,20903293.0,HP L1 1.fq.gz,0:150 1:150,A:1761336291;C:1386332040;G:1384745780;T:1738282105;N:291684,150,150,,,1761336291,1386332040,1384745780,1738282105,291684,SRX26610544,SRS23109422,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34119,SRR31230232,SRX26610543,SRS23109425,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,MT L3,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:MT|Replicate:3|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,MT L3,MT L3,MT,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,MT_L3_1.fq.gz MT_L3_2.fq.gz,fastq fastq,6641395500.0,22137985.0,MT L3 1.fq.gz,0:150 1:150,A:1870037050;C:1459746735;G:1464312013;T:1846983464;N:316238,150,150,,,1870037050,1459746735,1464312013,1846983464,316238,SRX26610543,SRS23109425,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34120,SRR31230233,SRX26610542,SRS23109421,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,MT L2,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:MT|Replicate:2|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,MT L2,MT L2,MT,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,MT_L2_1.fq.gz MT_L2_2.fq.gz,fastq fastq,6735230400.0,22450768.0,MT L2 1.fq.gz,0:150 1:150,A:1884876161;C:1494102137;G:1499635722;T:1856320830;N:295550,150,150,,,1884876161,1494102137,1499635722,1856320830,295550,SRX26610542,SRS23109421,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34121,SRR31230234,SRX26610541,SRS23109424,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,MT L1,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:MT|Replicate:1|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,MT L1,MT L1,MT,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,MT_L1_1.fq.gz MT_L1_2.fq.gz,fastq fastq,6382458300.0,21274861.0,MT L1 1.fq.gz,0:150 1:150,A:1811407290;C:1396361259;G:1388659914;T:1785732773;N:297064,150,150,,,1811407290,1396361259,1388659914,1785732773,297064,SRX26610541,SRS23109424,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34122,SRR31230235,SRX26610540,SRS23109423,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,NC L3,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:Control|Replicate:3|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,NC L3,NC L3,control,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,NC_L3_1.fq.gz NC_L3_2.fq.gz,fastq fastq,6815267400.0,22717558.0,NC L3 1.fq.gz,0:150 1:150,A:1909187573;C:1516756161;G:1522759558;T:1866449373;N:114735,150,150,,,1909187573,1516756161,1522759558,1866449373,114735,SRX26610540,SRS23109423,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34123,SRR31230236,SRX26610539,SRS23109419,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,TF L3,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:TF|Replicate:3|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,TF L3,TF L3,TF,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,TF_L3_1.fq.gz TF_L3_2.fq.gz,fastq fastq,6547426200.0,21824754.0,TF L3 1.fq.gz,0:150 1:150,A:1829107582;C:1450999468;G:1461503884;T:1805507445;N:307821,150,150,,,1829107582,1450999468,1461503884,1805507445,307821,SRX26610539,SRS23109419,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34124,SRR31230237,SRX26610538,SRS23109420,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,TF L2,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:TF|Replicate:2|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,TF L2,TF L2,TF,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,TF_L2_1.fq.gz TF_L2_2.fq.gz,fastq fastq,6327866400.0,21092888.0,TF L2 1.fq.gz,0:150 1:150,A:1792246492;C:1386064311;G:1383369731;T:1765884262;N:301604,150,150,,,1792246492,1386064311,1383369731,1765884262,301604,SRX26610538,SRS23109420,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34125,SRR31230238,SRX26610537,SRS23109418,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,NC L2,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:Control|Replicate:2|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,NC L2,NC L2,control,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,NC_L2_1.fq.gz NC_L2_2.fq.gz,fastq fastq,6779235000.0,22597450.0,NC L2 1.fq.gz,0:150 1:150,A:1908783350;C:1490731242;G:1502686284;T:1876708170;N:325954,150,150,,,1908783350,1490731242,1502686284,1876708170,325954,SRX26610537,SRS23109418,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 34126,SRR31230239,SRX26610536,SRS23109417,SRP543263,PRJNA1182301,Zebrafish Transcriptome data,PRJNA1182301,Other,Improving symptoms of light induced anxiety like insomnia in a zebrafish model.,,,,,NC L1,,breed:Danio rerio|age:3 days|collection date:2022 10|geo loc name:not collected|sex:mixed|tissue:whole body|treatment:Control|Replicate:1|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Transcriptome data,NC L1,NC L1,control,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 1500,,SRP543263,,,NC_L1_1.fq.gz NC_L1_2.fq.gz,fastq fastq,6318379500.0,21061265.0,NC L1 1.fq.gz,0:150 1:150,A:1785873867;C:1385813719;G:1388477232;T:1757923663;N:291019,150,150,,,1785873867,1385813719,1388477232,1757923663,291019,SRX26610536,SRS23109417,SRA2005827,Shanghai Ocean University|College of Food Science & Technology,Shanghai Ocean University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2024-11-05,Larval,Larval,Trunk,Surface Structure 61422,SRR12744939,SRX9217396,SRS7451218,SRP285861,PRJNA666534,Transcriptomic analysis of the developmental toxicity of microplastics in zebrafish,PRJNA666534,Other,This project was conduceted to explore the molecular mechanisms underlying the bioaccumulation depuration and developmental toxicity and immune dysfunction of microplastics in zebrafish larvae which provides novel insights into the ecological risks of MPs fragments.,,,,,PA H2O2 HA,,strain:AB|dev stage:9 dpf|sex:pooled male and female|tissue:whole body|BioSampleModel:Model organism or animal,,,,,,,,,Transcriptomic analysis of the developmental toxicity of microplastics inzebrafish,PA H2O2 HA,PA H2O2 HA,mRNA of zebrafish tissue,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP285861,,,PA_H2O2_HA.R1.fastq.gz PA_H2O2_HA.R2.fastq.gz,fastq fastq,7307814724.0,24198062.0,PA H2O2 HA.R1.fastq.gz,0:151 1:151,A:1916647803;C:1726826237;G:1763771127;T:1900498448;N:71109,151,151,,,1916647803,1726826237,1763771127,1900498448,71109,SRX9217396,SRS7451218,SRA1135893,Henan Normal University|College of Environment,Henan Normal University,2,0.94168,0.91408,0.0715,0.06936,0.6872,0.69163,0.46735,0.47262,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2020-09-30,Larval,Larval,Trunk,Surface Structure 61423,SRR12744940,SRX9217395,SRS7451217,SRP285861,PRJNA666534,Transcriptomic analysis of the developmental toxicity of microplastics in zebrafish,PRJNA666534,Other,This project was conduceted to explore the molecular mechanisms underlying the bioaccumulation depuration and developmental toxicity and immune dysfunction of microplastics in zebrafish larvae which provides novel insights into the ecological risks of MPs fragments.,,,,,PA,,strain:AB|dev stage:8 dpf|sex:pooled male and female|tissue:whole body|BioSampleModel:Model organism or animal,,,,,,,,,Transcriptomic analysis of the developmental toxicity of microplastics inzebrafish,PA,PA,mRNA of zebrafish tissue,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP285861,,,PA.R1.fastq.gz PA.R2.fastq.gz,fastq fastq,7677365782.0,25421741.0,PA.R1.fastq.gz,0:151 1:151,A:2003403761;C:1825346100;G:1859847851;T:1988694897;N:73173,151,151,,,2003403761,1825346100,1859847851,1988694897,73173,SRX9217395,SRS7451217,SRA1135893,Henan Normal University|College of Environment,Henan Normal University,2,0.94287,0.91685,0.06205,0.06006,0.6882,0.69234,0.45133,0.46041,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2020-09-30,Larval,Larval,Trunk,Surface Structure 61424,SRR12744941,SRX9217394,SRS7451216,SRP285861,PRJNA666534,Transcriptomic analysis of the developmental toxicity of microplastics in zebrafish,PRJNA666534,Other,This project was conduceted to explore the molecular mechanisms underlying the bioaccumulation depuration and developmental toxicity and immune dysfunction of microplastics in zebrafish larvae which provides novel insights into the ecological risks of MPs fragments.,,,,,CK,,strain:AB|dev stage:7 dpf|sex:pooled male and female|tissue:whole body|BioSampleModel:Model organism or animal,,,,,,,,,Transcriptomic analysis of the developmental toxicity of microplastics inzebrafish,CK,CK,mRNA of zebrafish tissue,,,RNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP285861,,,CK.R1.fastq.gz CK.R2.fastq.gz,fastq fastq,7117128904.0,23566652.0,CK.R1.fastq.gz,0:151 1:151,A:1891245951;C:1659968846;G:1695470010;T:1870375334;N:68763,151,151,,,1891245951,1659968846,1695470010,1870375334,68763,SRX9217394,SRS7451216,SRA1135893,Henan Normal University|College of Environment,Henan Normal University,2,0.93863,0.9111,0.08559,0.08339,0.68909,0.69461,0.46599,0.46482,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,other,unknown,bulk,unknown,unknown,,China,2020-09-30,Larval,Larval,Trunk,Surface Structure