rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 30611,SRR27899041,SRX23559293,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,M3,M3,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,M3_QN202308290926_S33_L006_R1_001.fastq.gz M3_QN202308290926_S33_L006_R2_001.fastq.gz,fastq fastq,5459385900.0,18197953.0,M3 QN202308290926 S33 L006 R1 001.fastq.gz,0:150 1:150,A:1436510558;C:1285969737;G:1307232876;T:1429316327;N:356402,150,150,,,1436510558,1285969737,1307232876,1429316327,356402,SRX23559293,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30612,SRR27899042,SRX23559292,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,M2,M2,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,M2_QN202308290926_S32_L006_R1_001.fastq.gz M2_QN202308290926_S32_L006_R2_001.fastq.gz,fastq fastq,5650189800.0,18833966.0,M2 QN202308290926 S32 L006 R1 001.fastq.gz,0:150 1:150,A:1497095888;C:1322054602;G:1339271288;T:1491392152;N:375870,150,150,,,1497095888,1322054602,1339271288,1491392152,375870,SRX23559292,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30613,SRR27899043,SRX23559291,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,M1,M1,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,M1_QN202308290926_S31_L006_R1_001.fastq.gz M1_QN202308290926_S31_L006_R2_001.fastq.gz,fastq fastq,5939011200.0,19796704.0,M1 QN202308290926 S31 L006 R1 001.fastq.gz,0:150 1:150,A:1545732755;C:1425193066;G:1428641258;T:1539050226;N:393895,150,150,,,1545732755,1425193066,1428641258,1539050226,393895,SRX23559291,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30614,SRR27899044,SRX23559290,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,B3,B3,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,B3_QN202308290926_S30_L006_R1_001.fastq.gz B3_QN202308290926_S30_L006_R2_001.fastq.gz,fastq fastq,5798168100.0,19327227.0,B3 QN202308290926 S30 L006 R1 001.fastq.gz,0:150 1:150,A:1523711096;C:1370345137;G:1386721981;T:1517002959;N:386927,150,150,,,1523711096,1370345137,1386721981,1517002959,386927,SRX23559290,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30615,SRR27899045,SRX23559289,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,B2,B2,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,B2_QN202308290926_S29_L006_R1_001.fastq.gz B2_QN202308290926_S29_L006_R2_001.fastq.gz,fastq fastq,5863484400.0,19544948.0,B2 QN202308290926 S29 L006 R1 001.fastq.gz,0:150 1:150,A:1534634834;C:1394273573;G:1406495277;T:1527691926;N:388790,150,150,,,1534634834,1394273573,1406495277,1527691926,388790,SRX23559289,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30616,SRR27899046,SRX23559288,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,B1,B1,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,B1_QN202308290926_S28_L006_R1_001.fastq.gz B1_QN202308290926_S28_L006_R2_001.fastq.gz,fastq fastq,6041746500.0,20139155.0,B1 QN202308290926 S28 L006 R1 001.fastq.gz,0:150 1:150,A:1585824243;C:1429955080;G:1445995253;T:1579566974;N:404950,150,150,,,1585824243,1429955080,1445995253,1579566974,404950,SRX23559288,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30617,SRR27899047,SRX23559287,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,C3,C3,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,C3_QN202308290926_S27_L006_R1_001.fastq.gz C3_QN202308290926_S27_L006_R2_001.fastq.gz,fastq fastq,6065066400.0,20216888.0,C3 QN202308290926 S27 L006 R1 001.fastq.gz,0:150 1:150,A:1594983080;C:1430417950;G:1449159595;T:1590101910;N:403865,150,150,,,1594983080,1430417950,1449159595,1590101910,403865,SRX23559287,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30618,SRR27899048,SRX23559286,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,C2,C2,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,C2_QN202308290926_S26_L006_R1_001.fastq.gz C2_QN202308290926_S26_L006_R2_001.fastq.gz,fastq fastq,5689528200.0,18965094.0,C2 QN202308290926 S26 L006 R1 001.fastq.gz,0:150 1:150,A:1489096177;C:1343812970;G:1370219696;T:1486021320;N:378037,150,150,,,1489096177,1343812970,1370219696,1486021320,378037,SRX23559286,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 30619,SRR27899049,SRX23559285,SRS20405500,SRP488601,PRJNA1073976,Transcriptome sequencing of zebrafish,PRJNA1073976,Other,This study utilized transcriptome sequencing technology to investigate the immunomodulatory effect of Lactobacillus gasseri LGV03 on zebrafish.,,,,Zebrafish,Zebrafish,,strain:AB|isolate:Zebrafish|breed:animals|cultivar:not applicable|ecotype:not applicable|age:7 day|dev stage:7 day|collection date:2023 08 21|geo loc name:China: Guangzhou|sex:not applicable|tissue:whole zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of 7 dpf zebrafish,C1,C1,ployA enrichment mRNA fragmentation First strand cDNA synthesis magnetic bead purification of one strand second strand cDNA synthesis strand end repair addition of A at the 3 'end addition of splice Purification and library amplification Sequencing sample library construction completed,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,VELA_DIAGNOSTICS,Sentosa SQ301,,SRP488601,,,C1_QN202308290926_S25_L006_R1_001.fastq.gz C1_QN202308290926_S25_L006_R2_001.fastq.gz,fastq fastq,5998914900.0,19996383.0,C1 QN202308290926 S25 L006 R1 001.fastq.gz,0:150 1:150,A:1558078274;C:1434298148;G:1451514838;T:1554627854;N:395786,150,150,,,1558078274,1434298148,1451514838,1554627854,395786,SRX23559285,SRS20405500,SRA1798922,The Seventh Affiliated Hospital Of Southern Medical University|Department of Laboratory Medicine,The Seventh Affiliated Hospital Of Southern Medical University,,,,,,,,,,,,B,B,biological fallback assumption,legacy,early,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-02-07,Larval,Larval,Whole Organism,All anatomical structures 35980,SRR33796117,SRX29017800,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P2000 1,P2000 1,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P2000_1_1.fq.gz P2000_1_2.fq.gz,fastq fastq,6682157100.0,22273857.0,P2000 1 1.fq.gz,0:150 1:150,A:1750970707;C:1591819991;G:1593263349;T:1746103053;N:0,150,150,,,1750970707,1591819991,1593263349,1746103053,0,SRX29017800,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35981,SRR33796118,SRX29017799,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P1000 3,P1000 3,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P1000_3_1.fq.gz P1000_3_2.fq.gz,fastq fastq,6596943000.0,21989810.0,P1000 3 1.fq.gz,0:150 1:150,A:1725528987;C:1574140428;G:1576046656;T:1721226929;N:0,150,150,,,1725528987,1574140428,1576046656,1721226929,0,SRX29017799,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35982,SRR33796119,SRX29017798,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P1000 2,P1000 2,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P1000_2_1.fq.gz P1000_2_2.fq.gz,fastq fastq,6677331000.0,22257770.0,P1000 2 1.fq.gz,0:150 1:150,A:1758237128;C:1582217484;G:1584403835;T:1752472553;N:0,150,150,,,1758237128,1582217484,1584403835,1752472553,0,SRX29017798,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35983,SRR33796120,SRX29017797,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P1000 1,P1000 1,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P1000_1_1.fq.gz P1000_1_2.fq.gz,fastq fastq,6771926100.0,22573087.0,P1000 1 1.fq.gz,0:150 1:150,A:1788071352;C:1600799117;G:1602227700;T:1780827931;N:0,150,150,,,1788071352,1600799117,1602227700,1780827931,0,SRX29017797,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35984,SRR33796121,SRX29017796,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P500 3,P500 3,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P500_3_1.fq.gz P500_3_2.fq.gz,fastq fastq,6691956300.0,22306521.0,P500 3 1.fq.gz,0:150 1:150,A:1763763611;C:1584417511;G:1585842124;T:1757933054;N:0,150,150,,,1763763611,1584417511,1585842124,1757933054,0,SRX29017796,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35985,SRR33796122,SRX29017795,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P500 2,P500 2,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P500_2_1.fq.gz P500_2_2.fq.gz,fastq fastq,6720858300.0,22402861.0,P500 2 1.fq.gz,0:150 1:150,A:1752279513;C:1609781801;G:1611483135;T:1747313851;N:0,150,150,,,1752279513,1609781801,1611483135,1747313851,0,SRX29017795,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35986,SRR33796123,SRX29017794,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P500 1,P500 1,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P500_1_1.fq.gz P500_1_2.fq.gz,fastq fastq,6820862100.0,22736207.0,P500 1 1.fq.gz,0:150 1:150,A:1812260874;C:1601860387;G:1602603805;T:1804137034;N:0,150,150,,,1812260874,1601860387,1602603805,1804137034,0,SRX29017794,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35987,SRR33796124,SRX29017793,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,MX 3,MX 3,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,MX_3_1.fq.gz MX_3_2.fq.gz,fastq fastq,6795327600.0,22651092.0,MX 3 1.fq.gz,0:150 1:150,A:1768016462;C:1630727253;G:1632326554;T:1764257331;N:0,150,150,,,1768016462,1630727253,1632326554,1764257331,0,SRX29017793,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35988,SRR33796125,SRX29017792,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P2000 3,P2000 3,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P2000_3_1.fq.gz P2000_3_2.fq.gz,fastq fastq,6620786400.0,22069288.0,P2000 3 1.fq.gz,0:150 1:150,A:1736628496;C:1574653543;G:1577791512;T:1731712849;N:0,150,150,,,1736628496,1574653543,1577791512,1731712849,0,SRX29017792,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35989,SRR33796126,SRX29017791,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,P2000 2,P2000 2,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,P2000_2_1.fq.gz P2000_2_2.fq.gz,fastq fastq,6613914000.0,22046380.0,P2000 2 1.fq.gz,0:150 1:150,A:1733574880;C:1575483348;G:1576793005;T:1728062767;N:0,150,150,,,1733574880,1575483348,1576793005,1728062767,0,SRX29017791,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35990,SRR33796127,SRX29017790,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,MX 2,MX 2,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,MX_2_1.fq.gz MX_2_2.fq.gz,fastq fastq,6769929300.0,22566431.0,MX 2 1.fq.gz,0:150 1:150,A:1773923783;C:1611785261;G:1615111695;T:1769108561;N:0,150,150,,,1773923783,1611785261,1615111695,1769108561,0,SRX29017790,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure 35991,SRR33796128,SRX29017789,SRS25233880,SRP589371,PRJNA1256770,Danio rerio Raw sequence reads,PRJNA1256770,Whole Genome Sequencing,Transcriptome sequencing was used to identify genes regulated by the polysaccharides that affect the immune activity of zebrafish.,,,,Model organism or animal sample from Danio rerio,Zebrafish treatment with polysaccharides,,strain:transgenic neutrophil green fluorescent MPX|age:3 dpf|dev stage:embryo|collection date:2024 05 01|geo loc name:China: Zhejiang|sex:pooled male and female|tissue:whole body|disease:Immunosuppression|MX:control sample|P500:immune suppression model treated with 500 ug/mL polysaccharide|P1000:immune suppression model treated with 1000 ug/mL polysaccharide|P2000:immune suppression model treated with 2000 ug/mL polysaccharide|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: embryo whole body,MX 1,MX 1,Total RNA was extracted from zebrafish tissue using TRIzol reagent according to the manufacturer's protocol. RNA integrity was verified using an Agilent 2100 Bioanalyzer. mRNA was enriched using polyA selection and fragmented. First and second strand cDNA synthesis was performed followed by end repair A tailing and adapter ligation. The library was amplified by PCR and sequenced using the BGISEQ MGISEQ 2000RS platform with paired end 150 bp reads.,,,RNA-Seq,TRANSCRIPTOMIC,cDNA_randomPriming,PAIRED,BGISEQ,MGISEQ-2000RS,,SRP589371,,,MX_1_1.fq.gz MX_1_2.fq.gz,fastq fastq,6715295400.0,22384318.0,MX 1 1.fq.gz,0:150 1:150,A:1774590051;C:1584963102;G:1587348964;T:1768393283;N:0,150,150,,,1774590051,1584963102,1587348964,1768393283,0,SRX29017789,SRS25233880,SRA2141272,West Anhui Universiaty|College of Biotechnology and Pharmaceutical Engine,West Anhui Universiaty,,,,,,,,,,,,B,B,biological fallback assumption,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-06-02,Larval,Larval,Trunk,Surface Structure