rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 39635,SRR1974165,SRX994290,SRS907736,SRP057116,PRJNA280983,Danio rerio strain:CG2 Transcriptome or Gene expression,PRJNA280983,Other,CG2 homozygous diploid zebrafish line.,,,,Model organism or animal sample from Danio rerio CG2,CG2 immune related tissues,,strain:CG2|dev stage:adult|sex:not determined|tissue:kidney intestine gills and spleen|BioSampleModel:Model organism or animal,,,,,,,,,CG2 normalized RNA seq pooled kidney intestine gills and spleen,CG2 Normalized,CG2,A single adult CG2 zebrafish was euthanized and the kidney intestine gills and spleen were dissected and combined for RNA extraction Trizol Life Technologies. RNA was prepared for sequencing with the TruSeq RNA kit Illumina and sequenced 2 x 100 bp paired end reads on a single lane of a HiSeq2000 Illumina.In an effort to detect rare transcripts a normalization procedure also was employed. Normalized cDNA was achieved with the MINT Universal cDNA synthesis and TRIMMER DIRECT cDNA normalization kits Evrogen which was then prepared for sequencing with the TruSeq DNA kit Illumina. Average insert size of 200 bps.,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina HiSeq 2000,2000Application ReadForward11Application ReadReverse101,SRP057116,,,130508_I1089_FCC1VKUACXX_L1_NCSU-GSL-0099_2.fq.gz 130508_I1089_FCC1VKUACXX_L1_NCSU-GSL-0099_1.fq.gz,fastq fastq,32265477800.0,161327389.0,CG2 Normalized,0:100 1:100,A:9100821450;C:6628233467;G:7212252211;T:9279872090;N:44298582,100,100,,,9100821450,6628233467,7212252211,9279872090,44298582,SRX994290,SRS907736,SRA258497,North Carolina State University,North Carolina State University,2,0.83842,0.78503,0.19412,0.17922,0.69704,0.71959,0.48624,0.4789,100,100,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,trueseq,bulk,unknown,unknown,,United States,2015-04-18,Adult,Adult,Multi-tissue,Multi-system 41035,SRR3581677,SRX1797273,SRS1465195,SRP075626,PRJNA322629,Mycobacterial infection of adult zebrafish,PRJNA322629,Other,RNA seq based profiling of Mycobacterium marinum granulomas from adult zebrafish and matched macrophage samples.,,,,Fluorescence activated cell sorted macrophages4,iRed4,,breed:*AB|dev stage:Adult|sex:pooled male and female|tissue:Fluorescence activated cell sorted macrophages from kidney|BioSampleModel:Model organism or animal,,,,,,,,,iRed4,iRed4,iRed4,1,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,SINGLE,ILLUMINA,Illumina HiSeq 2500,,SRP075626,,,iRed4.fastq.gz,fastq,2577391029.0,50537079.0,iRed4.fastq.gz,0:51,A:740368299;C:555561208;G:558570747;T:722870515;N:20260,51,,,,740368299,555561208,558570747,722870515,20260,SRX1797273,SRS1465195,SRA429040,Duke University|Molecular Genetics & Microbiology,Duke University,1,0.87886,,0.09748,,0.75676,,0.49364,,51,,B,,usable mapping rate,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,United States,2016-05-25,Adult,Adult,Multi-tissue,Multi-system 41036,SRR3581675,SRX1797272,SRS1465194,SRP075626,PRJNA322629,Mycobacterial infection of adult zebrafish,PRJNA322629,Other,RNA seq based profiling of Mycobacterium marinum granulomas from adult zebrafish and matched macrophage samples.,,,,Fluorescence activated cell sorted macrophages3,iRed3,,breed:*AB|dev stage:Adult|sex:pooled male and female|tissue:Fluorescence activated cell sorted macrophages from kidney|BioSampleModel:Model organism or animal,,,,,,,,,iRed3,iRed3,iRed3,1,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,SINGLE,ILLUMINA,Illumina HiSeq 2500,,SRP075626,,,iRed3.fastq.gz,fastq,2300094339.0,45099889.0,iRed3.fastq.gz,0:51,A:664396273;C:491535578;G:495836023;T:648307877;N:18588,51,,,,664396273,491535578,495836023,648307877,18588,SRX1797272,SRS1465194,SRA429039,Duke University|Molecular Genetics & Microbiology,Duke University,1,0.88281,,0.15449,,0.75507,,0.47198,,51,,B,,usable mapping rate,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,United States,2017-06-24,Adult,Adult,Multi-tissue,Multi-system 41037,SRR3581674,SRX1797271,SRS1465193,SRP075626,PRJNA322629,Mycobacterial infection of adult zebrafish,PRJNA322629,Other,RNA seq based profiling of Mycobacterium marinum granulomas from adult zebrafish and matched macrophage samples.,,,,Fluorescence activated cell sorted macrophages2,iRed2,,breed:*AB|dev stage:Adult|sex:pooled male and female|tissue:Fluorescence activated cell sorted macrophages from kidney|BioSampleModel:Model organism or animal,,,,,,,,,iRed2,iRed2,iRed2,1,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,SINGLE,ILLUMINA,Illumina HiSeq 2500,,SRP075626,,,iRed2.fastq.gz,fastq,1652550807.0,32402957.0,iRed2.fastq.gz,0:51,A:528348867;C:306088006;G:305625547;T:512475625;N:12762,51,,,,528348867,306088006,305625547,512475625,12762,SRX1797271,SRS1465193,SRA429038,Duke University|Molecular Genetics & Microbiology,Duke University,1,0.83699,,0.16858,,0.76688,,0.49036,,51,,B,,usable mapping rate,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,United States,2016-05-25,Adult,Adult,Multi-tissue,Multi-system 44993,SRR6450489,SRX3541479,SRS2819522,SRP128591,PRJNA427078,zebrafish Genome sequencing,PRJNA427078,Whole Genome Sequencing,Genome re sequencing and transcriptome sequencing,,,,Zebrafish transcriptome,Zebrafish trans,,ecotype:lab|age:6 month|sex:missing|tissue:skin muscle|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish:adult,WHZEBqrvEAAFRABPEI,WHZEBqrvEAAFRABPEI,skin muscle,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,HiSeq X Ten,,SRP128591,,,161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAFRABPEI-113_2.fq.gz 161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAFRABPEI-113_1.fq.gz,fastq fastq,3600021250.0,14400085.0,161208 I188 FCCA319ANXX L8 WHZEBqrvEAAFRABPEI 113 2.fq.gz,0:125 1:125,A:934930854;C:868403521;G:876791881;T:918413816;N:1481178,125,125,,,934930854,868403521,876791881,918413816,1481178,SRX3541479,SRS2819522,SRA645021,BGI,BGI,2,0.9521,0.95139,0.03254,0.03384,0.78072,0.782,0.51124,0.50752,125,125,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2018-01-08,Adult,Adult,Multi-tissue,Multi-system 44994,SRR6450490,SRX3541478,SRS2819522,SRP128591,PRJNA427078,zebrafish Genome sequencing,PRJNA427078,Whole Genome Sequencing,Genome re sequencing and transcriptome sequencing,,,,Zebrafish transcriptome,Zebrafish trans,,ecotype:lab|age:6 month|sex:missing|tissue:skin muscle|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish:adult,WHZEBqrvEAAERAAPEI,WHZEBqrvEAAERAAPEI,skin muscle,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,HiSeq X Ten,,SRP128591,,,161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAERAAPEI-112_1.fq.gz 161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAERAAPEI-112_2.fq.gz,fastq fastq,3746428750.0,14985715.0,161208 I188 FCCA319ANXX L8 WHZEBqrvEAAERAAPEI 112 2.fq.gz,0:125 1:125,A:943900815;C:931886385;G:943833449;T:925283757;N:1524344,125,125,,,943900815,931886385,943833449,925283757,1524344,SRX3541478,SRS2819522,SRA645021,BGI,BGI,2,0.95425,0.95353,0.06014,0.06092,0.77871,0.78092,0.55488,0.55289,125,125,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2019-11-26,Adult,Adult,Multi-tissue,Multi-system 44995,SRR6450499,SRX3541469,SRS2819522,SRP128591,PRJNA427078,zebrafish Genome sequencing,PRJNA427078,Whole Genome Sequencing,Genome re sequencing and transcriptome sequencing,,,,Zebrafish transcriptome,Zebrafish trans,,ecotype:lab|age:6 month|sex:missing|tissue:skin muscle|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish:adult,WHZEBqrvEAAGRABPEI,WHZEBqrvEAAGRABPEI,skin muscle,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,HiSeq X Ten,,SRP128591,,,161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAGRABPEI-127_1.fq.gz 161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAGRABPEI-127_2.fq.gz,fastq fastq,3692839750.0,14771359.0,161208 I188 FCCA319ANXX L8 WHZEBqrvEAAGRABPEI 127 2.fq.gz,0:125 1:125,A:954324405;C:894321874;G:903805870;T:938852024;N:1535577,125,125,,,954324405,894321874,903805870,938852024,1535577,SRX3541469,SRS2819522,SRA645021,BGI,BGI,2,0.95186,0.9505,0.03508,0.03577,0.77321,0.77607,0.51196,0.50758,125,125,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2019-11-26,Adult,Adult,Multi-tissue,Multi-system 44996,SRR6450500,SRX3541468,SRS2819522,SRP128591,PRJNA427078,zebrafish Genome sequencing,PRJNA427078,Whole Genome Sequencing,Genome re sequencing and transcriptome sequencing,,,,Zebrafish transcriptome,Zebrafish trans,,ecotype:lab|age:6 month|sex:missing|tissue:skin muscle|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish:adult,WHZEBqrvEAADRABPEI,WHZEBqrvEAADRABPEI,skin muscle,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,HiSeq X Ten,,SRP128591,,,161208_I188_FCCA319ANXX_L8_WHZEBqrvEAADRABPEI-110_1.fq.gz 161208_I188_FCCA319ANXX_L8_WHZEBqrvEAADRABPEI-110_2.fq.gz,fastq fastq,3765918500.0,15063674.0,161208 I188 FCCA319ANXX L8 WHZEBqrvEAADRABPEI 110 1.fq.gz,0:125 1:125,A:978737405;C:906962900;G:914851569;T:963799416;N:1567210,125,125,,,978737405,906962900,914851569,963799416,1567210,SRX3541468,SRS2819522,SRA645021,BGI,BGI,2,0.94834,0.9475,0.03675,0.03738,0.76211,0.76506,0.5095,0.50295,125,125,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2019-11-26,Adult,Adult,Multi-tissue,Multi-system 44997,SRR6450501,SRX3541467,SRS2819522,SRP128591,PRJNA427078,zebrafish Genome sequencing,PRJNA427078,Whole Genome Sequencing,Genome re sequencing and transcriptome sequencing,,,,Zebrafish transcriptome,Zebrafish trans,,ecotype:lab|age:6 month|sex:missing|tissue:skin muscle|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish:adult,WHZEBqrvEAACRAAPEI,WHZEBqrvEAACRAAPEI,skin muscle,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,HiSeq X Ten,,SRP128591,,,161208_I188_FCCA319ANXX_L8_WHZEBqrvEAACRAAPEI-109_1.fq.gz 161208_I188_FCCA319ANXX_L8_WHZEBqrvEAACRAAPEI-109_2.fq.gz,fastq fastq,3262728000.0,13050912.0,161208 I188 FCCA319ANXX L8 WHZEBqrvEAACRAAPEI 109 2.fq.gz,0:125 1:125,A:841105717;C:792680416;G:803830714;T:823771562;N:1339591,125,125,,,841105717,792680416,803830714,823771562,1339591,SRX3541467,SRS2819522,SRA645021,BGI,BGI,2,0.95367,0.95244,0.02953,0.0301,0.7839,0.78516,0.47404,0.52072,125,125,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2019-11-26,Adult,Adult,Multi-tissue,Multi-system 44998,SRR6450502,SRX3541466,SRS2819522,SRP128591,PRJNA427078,zebrafish Genome sequencing,PRJNA427078,Whole Genome Sequencing,Genome re sequencing and transcriptome sequencing,,,,Zebrafish transcriptome,Zebrafish trans,,ecotype:lab|age:6 month|sex:missing|tissue:skin muscle|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish:adult,WHZEBqrvEAAHRABPEI,WHZEBqrvEAAHRABPEI,skin muscle,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,HiSeq X Ten,,SRP128591,,,161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAHRABPEI-128_1.fq.gz 161208_I188_FCCA319ANXX_L8_WHZEBqrvEAAHRABPEI-128_2.fq.gz,fastq fastq,3710501500.0,14842006.0,161208 I188 FCCA319ANXX L8 WHZEBqrvEAAHRABPEI 128 1.fq.gz,0:125 1:125,A:955350214;C:902731408;G:912565284;T:938345980;N:1508614,125,125,,,955350214,902731408,912565284,938345980,1508614,SRX3541466,SRS2819522,SRA645021,BGI,BGI,2,0.95634,0.9563,0.03159,0.03301,0.77293,0.77579,0.50883,0.50743,125,125,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2019-11-26,Adult,Adult,Multi-tissue,Multi-system 61657,SRR12926111,SRX9390273,SRS7609571,SRP289515,PRJNA672972,Transcriptome sequencing of CG1 zebrafish immune related tissues,PRJNA672972,Other,CG1 is a homozygous diploid line of zebrafish. Due to the clonal nature of this line minimal genetic variation among individuals is expected. In anticipation of a draft genome for the CG1 line of zebrafish the research community may find value in transcriptome data from the same genetic background. Kidney intestine gills and spleen from six adult CG1 zebrafish were dissected and RNA from each tissue type was extracted Trizol Life Technologies. Equal amounts of RNA were pooled together prior to NGS library prep.,,,,,Danio rerio CG1,,strain:CG1|dev stage:adult|sex:not collected|tissue:kidney spleen liver intestine and gills|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of CG1 Danio rerio: immune related tissues,NO059,NO059,Equal amounts of RNA extracted from kidney spleen intestine liver and gills of six zebrafish were pooled prior to library prep and paired read sequencing via a NovaSeq 6000.,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP289515,,,NS059_1.fq.gz NS059_2.fq.gz,fastq fastq,6206095500.0,20686985.0,NS059 1.fq.gz,0:150 1:150,A:1672977157;C:1431352025;G:1440567087;T:1661082893;N:116338,150,150,,,1672977157,1431352025,1440567087,1661082893,116338,SRX9390273,SRS7609571,SRA1149693,NCSU - CVM|Molecular Biomedical Sciences,NCSU - CVM,2,0.94252,0.94204,0.05254,0.05253,0.71762,0.71798,0.4755,0.47719,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,United States,2020-10-28,Adult,Adult,Multi-tissue,Multi-system 71759,SRR22044636,SRX18025773,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LNABP1,LNABP1,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LNABP1_1.fq.gz LNABP1_2.fq.gz,fastq fastq,12016900500.0,40056335.0,LNABP1 1.fq.gz,0:150 1:150,A:3230586776;C:2758508058;G:2797890857;T:3229786930;N:127879,150,150,,,3230586776,2758508058,2797890857,3229786930,127879,SRX18025773,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93429,0.9338,0.07102,0.07148,0.63355,0.63467,0.50502,0.51316,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71760,SRR22044637,SRX18025772,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LBP3,LBP3,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LBP3_1.fq.gz LBP3_2.fq.gz,fastq fastq,8243387700.0,27477959.0,LBP3 1.fq.gz,0:150 1:150,A:2197118454;C:1909927418;G:1934279862;T:2201972651;N:89315,150,150,,,2197118454,1909927418,1934279862,2201972651,89315,SRX18025772,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93543,0.93389,0.06486,0.06435,0.63844,0.63987,0.50139,0.49293,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71761,SRR22044638,SRX18025771,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LBP2,LBP2,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LBP2_1.fq.gz LBP2_2.fq.gz,fastq fastq,8210523900.0,27368413.0,LBP2 1.fq.gz,0:150 1:150,A:2204629386;C:1888046225;G:1909444037;T:2208316615;N:87637,150,150,,,2204629386,1888046225,1909444037,2208316615,87637,SRX18025771,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93155,0.93022,0.07674,0.07531,0.63222,0.6328,0.49422,0.49497,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71762,SRR22044639,SRX18025770,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LBP1,LBP1,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LBP1_1.fq.gz LBP1_2.fq.gz,fastq fastq,7190742000.0,23969140.0,LBP1 1.fq.gz,0:150 1:150,A:1922277549;C:1660533463;G:1679084065;T:1928769372;N:77551,150,150,,,1922277549,1660533463,1679084065,1928769372,77551,SRX18025770,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93438,0.93373,0.0674,0.06696,0.63303,0.63447,0.51132,0.51933,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71763,SRR22044640,SRX18025769,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LNA3,LNA3,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LNA3_1.fq.gz LNA3_2.fq.gz,fastq fastq,6214134900.0,20713783.0,LNA3 1.fq.gz,0:150 1:150,A:1664379440;C:1432496856;G:1449365723;T:1667826164;N:66717,150,150,,,1664379440,1432496856,1449365723,1667826164,66717,SRX18025769,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93449,0.93456,0.06827,0.0686,0.64037,0.64051,0.50111,0.49828,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71764,SRR22044641,SRX18025768,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LNA2,LNA2,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LNA2_1.fq.gz LNA2_2.fq.gz,fastq fastq,5436146100.0,18120487.0,LNA2 1.fq.gz,0:150 1:150,A:1452236257;C:1256359137;G:1270471479;T:1457021041;N:58186,150,150,,,1452236257,1256359137,1270471479,1457021041,58186,SRX18025768,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93892,0.93841,0.0672,0.06699,0.63897,0.64058,0.49623,0.49695,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71765,SRR22044642,SRX18025767,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LNA1,LNA1,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LNA1_1.fq.gz LNA1_2.fq.gz,fastq fastq,6667178100.0,22223927.0,LNA1 1.fq.gz,0:150 1:150,A:1780173549;C:1541404149;G:1560012317;T:1785516098;N:71987,150,150,,,1780173549,1541404149,1560012317,1785516098,71987,SRX18025767,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93468,0.93487,0.06897,0.06923,0.6328,0.63433,0.49835,0.50031,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71766,SRR22044643,SRX18025766,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,CT3,CT3,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,CT3_1.fq.gz CT3_2.fq.gz,fastq fastq,6464687100.0,21548957.0,CT3 1.fq.gz,0:150 1:150,A:1732427603;C:1491879595;G:1510633612;T:1729676068;N:70222,150,150,,,1732427603,1491879595,1510633612,1729676068,70222,SRX18025766,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93765,0.93728,0.05696,0.05676,0.65291,0.65423,0.48863,0.49046,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71767,SRR22044644,SRX18025765,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LNABP3,LNABP3,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LNABP3_1.fq.gz LNABP3_2.fq.gz,fastq fastq,7227946200.0,24093154.0,LNABP3 1.fq.gz,0:150 1:150,A:1939462184;C:1664015969;G:1684259233;T:1940131564;N:77250,150,150,,,1939462184,1664015969,1684259233,1940131564,77250,SRX18025765,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93363,0.93253,0.06747,0.06714,0.63674,0.63865,0.50269,0.50196,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71768,SRR22044645,SRX18025764,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,LNABP2,LNABP2,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,LNABP2_1.fq.gz LNABP2_2.fq.gz,fastq fastq,7428538800.0,24761796.0,LNABP2 1.fq.gz,0:150 1:150,A:2003254929;C:1700799586;G:1720403805;T:2003999751;N:80729,150,150,,,2003254929,1700799586,1720403805,2003999751,80729,SRX18025764,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93248,0.93113,0.07748,0.0767,0.63118,0.63254,0.509,0.5088,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71769,SRR22044646,SRX18025763,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,CT2,CT2,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,CT2_1.fq.gz CT2_2.fq.gz,fastq fastq,5436781200.0,18122604.0,CT2 1.fq.gz,0:150 1:150,A:1464037954;C:1245564079;G:1262849214;T:1464271681;N:58272,150,150,,,1464037954,1245564079,1262849214,1464271681,58272,SRX18025763,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93567,0.93474,0.0708,0.0702,0.63816,0.63936,0.49822,0.49699,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system 71770,SRR22044647,SRX18025762,SRS15406475,SRP404552,PRJNA893346,Danio rerio Genome sequencing and assembly,PRJNA893346,Other,Toxicity of naphthenic acid and benzo[a]pyrene to zebrafish at environmental concentrations,,,,,Zebrafish,,breed:wild type|age:3 month 4 month|dev stage:Adult fish|sex:male|tissue:liverbrain|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,CT1,CT1,Transcriptome of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP404552,,,CT1_1.fq.gz CT1_2.fq.gz,fastq fastq,7102526400.0,23675088.0,CT1 1.fq.gz,0:150 1:150,A:1907103678;C:1631321039;G:1652190270;T:1911834503;N:76910,150,150,,,1907103678,1631321039,1652190270,1911834503,76910,SRX18025762,SRS15406475,SRA1527576,Shandong Normal University|Shandong Normal University,Shandong Normal University,2,0.93033,0.92974,0.07468,0.07439,0.62726,0.62842,0.50195,0.50219,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-10-26,Adult,Adult,Multi-tissue,Multi-system