rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
34262,SRR31595085,SRX26959911,SRS23429841,SRP549196,PRJNA1193812,Single cell transcriptome sequencing of zebrafish olfactory epithelium,PRJNA1193812,Other,We performed single cell sequencing in the olfactory epithelium of wild type zebrafish and zebrafish treated with alarm substances and compared them.,,,Alarm substances treatment Group,,CAS,,strain:AB strain|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:1 year old|dev stage:adult CAS group|collection date:2020 10 10|geo loc name:China: Wuhan|sex:male|tissue:Olfactory epithelium CAS group|BioSampleModel:Model organism or animal,,,,,,,,,Single cell transcriptome of the AB zebrafish olfactory epithelium post treatment with alarm substances,CAS OE,CAS OE,sequencing libraries were loaded on an Illumina NextSeq 550AR with paired end kits. Read 1 was used to distinguish different transcripts of different cells. Read 2 was used to determine the genetic information.,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,RANDOM,PAIRED,ILLUMINA,NextSeq 550,,SRP549196,,,CAS_S1_L001_R1_001.fastq.gz CAS_S1_L001_R2_001.fastq.gz,fastq fastq,54518124857.0,458135503.0,CAS S1 L001 R1 001.fastq.gz,0:28 1:91,A:15384916510;C:12274547586;G:14008767028;T:12837270924;N:12622809,28,91,,,15384916510,12274547586,14008767028,12837270924,12622809,SRX26959911,SRS23429841,SRA2027027,"Institute of Hydrobiology, Chinese Academy of Sciences|Chinese Academy of Sciences","Institute of Hydrobiology, Chinese Academy of Sciences",,,,,,,,,,,,T,B,sc-like readlen,illumina,nextseq,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,China,2024-12-04,Adult,Adult,Brain,Nervous System
34263,SRR31595086,SRX26959910,SRS23429840,SRP549196,PRJNA1193812,Single cell transcriptome sequencing of zebrafish olfactory epithelium,PRJNA1193812,Other,We performed single cell sequencing in the olfactory epithelium of wild type zebrafish and zebrafish treated with alarm substances and compared them.,,,Blank control group,,CTR,,strain:AB strain|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:1 year old|dev stage:adult CTR group|collection date:2020 10 10|geo loc name:China: Wuhan|sex:male|tissue:Olfactory epithelium CTR group|BioSampleModel:Model organism or animal,,,,,,,,,Single cell transcriptome of the AB strain zebrafish olfactory epithelium,CTR OE,CTR OE,sequencing libraries were loaded on an Illumina NextSeq 550AR with paired end kits. Read 1 was used to distinguish different transcripts of different cells. Read 2 was used to determine the genetic information.,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,RANDOM,PAIRED,ILLUMINA,NextSeq 550,,SRP549196,,,CTR_S1_L001_R1_001.fastq.gz CTR_S1_L001_R2_001.fastq.gz,fastq fastq,50773421790.0,426667410.0,CTR S1 L001 R1 001.fastq.gz,0:28 1:91,A:14105926130;C:11510784907;G:13135577448;T:12011516484;N:9616821,28,91,,,14105926130,11510784907,13135577448,12011516484,9616821,SRX26959910,SRS23429840,SRA2027027,"Institute of Hydrobiology, Chinese Academy of Sciences|Chinese Academy of Sciences","Institute of Hydrobiology, Chinese Academy of Sciences",,,,,,,,,,,,T,B,sc-like readlen,illumina,nextseq,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,China,2024-12-04,Adult,Adult,Brain,Nervous System