rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 32362,SRR29157958,SRX24679082,SRS21413713,SRP509709,PRJNA1115529,Danio rerio Raw sequence reads of gonadal tissue,PRJNA1115529,Whole Genome Sequencing,Evaluation of gene expression changes in zebrafish gonads following a full life cycle exposure to the non steroidal anti inflammatory drug naproxen NPX in order to evaluate the main pathways affected,,,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on zebrafish ovary,Model organism or animal sample from Danio rerio,Ovary NPX,,strain:AB|age:4 month|dev stage:Adult|collection date:2021 03|geo loc name:Portugal: Matosinhos|sex:female|tissue:Ovary|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish ovary RNA seq from NPX,Ovary NPX,Ovary NPX,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on parental zebrafish ovary,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP509709,,,H4_2.fq.gz H4_1.fq.gz H3_2.fq.gz H3_1.fq.gz H2_2.fq.gz H2_1.fq.gz H1_2.fq.gz H1_1.fq.gz,fastq fastq fastq fastq fastq fastq fastq fastq,37288126200.0,124293754.0,H1 1.fq.gz,0:150 1:150,A:9870906480;C:8895442858;G:8761667172;T:9759826428;N:283262,150,150,,,9870906480,8895442858,8761667172,9759826428,283262,SRX24679082,SRS21413713,SRA1876810,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research|EDEC - Endocrine Disruptors and Emergent Contamina,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research,2,0.93451,0.93482,0.01992,0.01985,0.75966,0.75943,0.45469,0.4556,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Portugal,2024-05-24,Adult,Adult,Gonad,Reproductive System 32363,SRR29157959,SRX24679081,SRS21413712,SRP509709,PRJNA1115529,Danio rerio Raw sequence reads of gonadal tissue,PRJNA1115529,Whole Genome Sequencing,Evaluation of gene expression changes in zebrafish gonads following a full life cycle exposure to the non steroidal anti inflammatory drug naproxen NPX in order to evaluate the main pathways affected,,,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on zebrafish ovary,Model organism or animal sample from Danio rerio,Ovary Ctrl,,strain:AB|age:4 month|dev stage:Adult|collection date:2021 03|geo loc name:Portugal: Matosinhos|sex:female|tissue:Ovary|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish ovary RNA seq from Control,Ovary CTRL,Ovary CTRL,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on parental zebrafish ovary,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP509709,,,D4_2.fq.gz D4_1.fq.gz D3_2.fq.gz D3_1.fq.gz D2_2.fq.gz D2_1.fq.gz D1_2.fq.gz D1_1.fq.gz,fastq fastq fastq fastq fastq fastq fastq fastq,48240351600.0,160801172.0,D1 1.fq.gz,0:150 1:150,A:12507813252;C:11711256340;G:11706267844;T:12313668932;N:1345232,150,150,,,12507813252,11711256340,11706267844,12313668932,1345232,SRX24679081,SRS21413712,SRA1876810,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research|EDEC - Endocrine Disruptors and Emergent Contamina,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research,2,0.93217,0.93303,0.01595,0.01634,0.75948,0.75998,0.46158,0.46061,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Portugal,2024-05-24,Adult,Adult,Gonad,Reproductive System 32364,SRR29157960,SRX24679080,SRS21413711,SRP509709,PRJNA1115529,Danio rerio Raw sequence reads of gonadal tissue,PRJNA1115529,Whole Genome Sequencing,Evaluation of gene expression changes in zebrafish gonads following a full life cycle exposure to the non steroidal anti inflammatory drug naproxen NPX in order to evaluate the main pathways affected,,,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on zebrafish testis,Model organism or animal sample from Danio rerio,Testis NPX,,strain:AB|age:4 month|dev stage:Adult|collection date:2021 03|geo loc name:Portugal: Matosinhos|sex:male|tissue:Testis|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish testis RNA seq from NPX,Testis NPX,Testis NPX,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on parental zebrafish testis,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP509709,,,G4_2.fq.gz G4_1.fq.gz G3_2.fq.gz G3_1.fq.gz G2_2.fq.gz G2_1.fq.gz G1_2.fq.gz G1_1.fq.gz,fastq fastq fastq fastq fastq fastq fastq fastq,48293186700.0,160977289.0,G1 1.fq.gz,0:150 1:150,A:12737664564;C:11515099418;G:11506913376;T:12532403181;N:1106161,150,150,,,12737664564,11515099418,11506913376,12532403181,1106161,SRX24679080,SRS21413711,SRA1876810,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research|EDEC - Endocrine Disruptors and Emergent Contamina,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research,2,0.93531,0.93628,0.04883,0.04847,0.66707,0.66728,0.47213,0.47226,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Portugal,2024-05-24,Adult,Adult,Gonad,Reproductive System 32365,SRR29157961,SRX24679079,SRS21413710,SRP509709,PRJNA1115529,Danio rerio Raw sequence reads of gonadal tissue,PRJNA1115529,Whole Genome Sequencing,Evaluation of gene expression changes in zebrafish gonads following a full life cycle exposure to the non steroidal anti inflammatory drug naproxen NPX in order to evaluate the main pathways affected,,,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on parental zebrafish testis,Model organism or animal sample from Danio rerio,Testis CTRL,,strain:AB|age:4 month|dev stage:Adult|collection date:2021 03|geo loc name:Portugal: Matosinhos|sex:male|tissue:Testis|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish testis RNA seq from Control,Testis CTRL,Testis CTRL,The current study assessed the long term effects of environmentally relevant concentrations of NPX ng/L to low g/L on parental zebrafish testis,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP509709,,,C4_2.fq.gz C4_1.fq.gz C3_2.fq.gz C3_1.fq.gz C2_2.fq.gz C2_1.fq.gz C1_2.fq.gz C1_1.fq.gz,fastq fastq fastq fastq fastq fastq fastq fastq,47457731100.0,158192437.0,C1 1.fq.gz,0:150 1:150,A:12817545225;C:10993554835;G:10941137146;T:12704995076;N:498818,150,150,,,12817545225,10993554835,10941137146,12704995076,498818,SRX24679079,SRS21413710,SRA1876810,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research|EDEC - Endocrine Disruptors and Emergent Contamina,CIIMAR - Interdisciplinary Centre of Marine and Environmental Research,2,0.93023,0.9282,0.0889,0.08851,0.63106,0.63098,0.4869,0.48618,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Portugal,2024-05-24,Adult,Adult,Gonad,Reproductive System 59491,SRR11922998,SRX8468717,SRS6769371,SRP265917,PRJNA637248,Transcriptome of preovulatory follicles in zebrafish,PRJNA637248,Other,In our previous study we successfully established an ideal model anovulatory nuclear progesterone receptor npr mutant zebrafish. In order to deciphering the molecular mechanism of ovulation we profiled the transcriptome of preovulatory follicles from npr mutant and wild type zebrafish using RNA sequencing RNA seq.,,,,wild type maturation zebrafish 3,WM3,,strain:ABstrain|age:90 dpf stage:adult|sex:female|tissue:follicles|biological replicate:biological replicate 3|BioSampleModel:Model organism or animal,,,,,,,,,WM3,WM3,WM3,follicles from wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP265917,,loader:latf load,WM3_1.fq.gz WM3_2.fq.gz,fastq fastq,5164813350.0,21335821.0,WM3 1.fq.gz,0:121.04 1:121.04,A:1342860052;C:1253209510;G:1217435391;T:1351036532;N:271865,121,121,,,1342860052,1253209510,1217435391,1351036532,271865,SRX8468717,SRS6769371,,,Guangdong Provincial People's Hospital,2,0.95699,0.95499,0.02053,0.02124,0.7699,0.77339,0.47535,0.47234,100,100,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-06-04,Adult,Adult,Gonad,Reproductive System 59492,SRR11922999,SRX8468716,SRS6769370,SRP265917,PRJNA637248,Transcriptome of preovulatory follicles in zebrafish,PRJNA637248,Other,In our previous study we successfully established an ideal model anovulatory nuclear progesterone receptor npr mutant zebrafish. In order to deciphering the molecular mechanism of ovulation we profiled the transcriptome of preovulatory follicles from npr mutant and wild type zebrafish using RNA sequencing RNA seq.,,,,wild type maturation zebrafish 2,WM2,,strain:ABstrain|age:90 dpf stage:adult|sex:female|tissue:follicles|biological replicate:biological replicate 2|BioSampleModel:Model organism or animal,,,,,,,,,WM2,WM2,WM2,follicles from wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP265917,,loader:latf load,WM2_2.fq.gz WM2_1.fq.gz,fastq fastq,5038968000.0,20965060.0,WM2 1.fq.gz,0:120.18 1:120.18,A:1330786068;C:1205415239;G:1168349899;T:1334149863;N:266931,120,120,,,1330786068,1205415239,1168349899,1334149863,266931,SRX8468716,SRS6769370,,,Guangdong Provincial People's Hospital,2,0.96517,0.9637,0.02825,0.029,0.78281,0.78827,0.49178,0.5001,100,100,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-06-04,Adult,Adult,Gonad,Reproductive System 59493,SRR11923000,SRX8468715,SRS6769369,SRP265917,PRJNA637248,Transcriptome of preovulatory follicles in zebrafish,PRJNA637248,Other,In our previous study we successfully established an ideal model anovulatory nuclear progesterone receptor npr mutant zebrafish. In order to deciphering the molecular mechanism of ovulation we profiled the transcriptome of preovulatory follicles from npr mutant and wild type zebrafish using RNA sequencing RNA seq.,,,,wild type maturation zebrafish 1,WM1,,strain:ABstrain|age:90 dpf stage:adult|sex:female|tissue:follicles|biological replicate:biological replicate 1|BioSampleModel:Model organism or animal,,,,,,,,,WM1,WM1,WM1,follicles from wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP265917,,loader:latf load,WM1_1.fq.gz WM1_2.fq.gz,fastq fastq,5339065900.0,22561824.0,WM1 1.fq.gz,0:118.32 1:118.32,A:1399978581;C:1284355952;G:1246401251;T:1408044640;N:285476,118,118,,,1399978581,1284355952,1246401251,1408044640,285476,SRX8468715,SRS6769369,,,Guangdong Provincial People's Hospital,2,0.95701,0.95537,0.02571,0.02687,0.75842,0.76508,0.48251,0.47803,100,100,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-06-04,Adult,Adult,Gonad,Reproductive System 59494,SRR11923001,SRX8468714,SRS6769368,SRP265917,PRJNA637248,Transcriptome of preovulatory follicles in zebrafish,PRJNA637248,Other,In our previous study we successfully established an ideal model anovulatory nuclear progesterone receptor npr mutant zebrafish. In order to deciphering the molecular mechanism of ovulation we profiled the transcriptome of preovulatory follicles from npr mutant and wild type zebrafish using RNA sequencing RNA seq.,,,,npr mutant maturation zebrafish 3,PM3,,strain:AB strain|age:90 dpf stage:adult|sex:female|tissue:follicles|biological replicate:biological replicate 3|BioSampleModel:Model organism or animal,,,,,,,,,PM3,PM3,PM3,follicles from npr mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP265917,,loader:latf load,PM3_1.fq.gz PM3_2.fq.gz,fastq fastq,5183601600.0,21567702.0,PM3 1.fq.gz,0:120.17 1:120.17,A:1353527028;C:1252588420;G:1215683962;T:1361527086;N:275104,120,120,,,1353527028,1252588420,1215683962,1361527086,275104,SRX8468714,SRS6769368,,,Guangdong Provincial People's Hospital,2,0.95455,0.95236,0.02612,0.02697,0.7527,0.75692,0.47131,0.47079,100,100,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-06-04,Adult,Adult,Gonad,Reproductive System 59495,SRR11923002,SRX8468713,SRS6769367,SRP265917,PRJNA637248,Transcriptome of preovulatory follicles in zebrafish,PRJNA637248,Other,In our previous study we successfully established an ideal model anovulatory nuclear progesterone receptor npr mutant zebrafish. In order to deciphering the molecular mechanism of ovulation we profiled the transcriptome of preovulatory follicles from npr mutant and wild type zebrafish using RNA sequencing RNA seq.,,,,npr mutant maturation zebrafish 2,PM2,,strain:AB strain|age:90 dpf stage:adult|sex:female|tissue:follicles|biological replicate:biological replicate 2|BioSampleModel:Model organism or animal,,,,,,,,,PM2,PM2,PM2,follicles from npr mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP265917,,loader:latf load,PM2_1.fq.gz PM2_2.fq.gz,fastq fastq,5153649800.0,21236251.0,PM2 1.fq.gz,0:121.34 1:121.34,A:1350474539;C:1242376005;G:1205362278;T:1355166672;N:270306,121,121,,,1350474539,1242376005,1205362278,1355166672,270306,SRX8468713,SRS6769367,,,Guangdong Provincial People's Hospital,2,0.95919,0.95777,0.02508,0.02567,0.76556,0.77009,0.48104,0.4828,100,100,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-06-04,Adult,Adult,Gonad,Reproductive System 59496,SRR11923003,SRX8468712,SRS6769366,SRP265917,PRJNA637248,Transcriptome of preovulatory follicles in zebrafish,PRJNA637248,Other,In our previous study we successfully established an ideal model anovulatory nuclear progesterone receptor npr mutant zebrafish. In order to deciphering the molecular mechanism of ovulation we profiled the transcriptome of preovulatory follicles from npr mutant and wild type zebrafish using RNA sequencing RNA seq.,,,,npr mutant maturation zebrafish 1,PM1,,strain:AB strain|age:90 dpf stage:adult|sex:female|tissue:follicles|biological replicate:biological replicate 1|BioSampleModel:Model organism or animal,,,,,,,,,PM1,PM1,PM1,follicles from npr mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP265917,,loader:latf load,PM1_2.fq.gz PM1_1.fq.gz,fastq fastq,5391889650.0,22984853.0,PM1 1.fq.gz,0:117.29 1:117.29,A:1407914273;C:1304953558;G:1264851959;T:1413882474;N:287386,117,117,,,1407914273,1304953558,1264851959,1413882474,287386,SRX8468712,SRS6769366,,,Guangdong Provincial People's Hospital,2,0.95868,0.95745,0.0259,0.02746,0.76002,0.76745,0.47978,0.48306,100,100,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-06-04,Adult,Adult,Gonad,Reproductive System 64249,SRR14373546,SRX10725858,SRS8815710,SRP318063,PRJNA726592,GH overexpression on gonadal microRNAome profile in zebrafish males,PRJNA726592,Other,Evaluate computationally the kinetic parameters as well as to identify and quantify the set of miRNAs of the spermatozoa from gh transgenic gh+ and non transgenic NT zebrafish that may be correlated with low spermatic quality.,,,,gh transgenic 6,GH3,,strain:F0104|age:15 month|dev stage:adult|sex:male|tissue:gonadal|biological replicate:6|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of Danio rerio: adult male gonad,GH3,GH3,NEBNext Small RNA Library Prep Set,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,Illumina MiSeq,,SRP318063,,,PoolUFPEL-GH6.fastq,fastq,20104659.0,394209.0,PoolUFPEL GH6.fastq,0:51 1:0,A:4462767;C:4536250;G:6471518;T:4633666;N:458,51,0,,,4462767,4536250,6471518,4633666,458,SRX10725858,SRS8815710,SRA1226279,Universidade Federal de Pelotas|CDTec,Universidade Federal de Pelotas,1,0.80185,,0.21091,,0.91547,,0.57044,,51,,B,,usable mapping rate,illumina,miseq,unknown,random_priming,nebnext,bulk,unknown,unknown,,Brazil,2021-04-30,Adult,Adult,Gonad,Reproductive System 64250,SRR14373547,SRX10725857,SRS8815709,SRP318063,PRJNA726592,GH overexpression on gonadal microRNAome profile in zebrafish males,PRJNA726592,Other,Evaluate computationally the kinetic parameters as well as to identify and quantify the set of miRNAs of the spermatozoa from gh transgenic gh+ and non transgenic NT zebrafish that may be correlated with low spermatic quality.,,,,gh transgenic 4,GH2,,strain:F0104|age:15 month|dev stage:adult|sex:male|tissue:gonadal|biological replicate:5|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of Danio rerio: adult male gonad,GH2,GH2,NEBNext Small RNA Library Prep Set,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,Illumina MiSeq,,SRP318063,,,PoolUFPEL-GH4.fastq,fastq,136130934.0,2669234.0,PoolUFPEL GH4.fastq,0:51 1:0,A:31505752;C:32606264;G:41632000;T:30383900;N:3018,51,0,,,31505752,32606264,41632000,30383900,3018,SRX10725857,SRS8815709,SRA1226279,Universidade Federal de Pelotas|CDTec,Universidade Federal de Pelotas,1,0.78619,,0.26843,,0.87834,,0.48728,,51,,B,,usable mapping rate,illumina,miseq,unknown,random_priming,nebnext,bulk,unknown,unknown,,Brazil,2021-04-30,Adult,Adult,Gonad,Reproductive System 64251,SRR14373548,SRX10725856,SRS8815708,SRP318063,PRJNA726592,GH overexpression on gonadal microRNAome profile in zebrafish males,PRJNA726592,Other,Evaluate computationally the kinetic parameters as well as to identify and quantify the set of miRNAs of the spermatozoa from gh transgenic gh+ and non transgenic NT zebrafish that may be correlated with low spermatic quality.,,,,gh transgenic 3,GH1,,strain:F0104|age:15 month|dev stage:adult|sex:male|tissue:gonadal|biological replicate:4|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of Danio rerio: adult male gonad,GH1,GH1,NEBNext Small RNA Library Prep Set,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,Illumina MiSeq,,SRP318063,,,PoolUFPEL-GH3.fastq,fastq,364152699.0,7140249.0,PoolUFPEL GH3.fastq,0:51 1:0,A:79211373;C:83789471;G:117772711;T:83370974;N:8170,51,0,,,79211373,83789471,117772711,83370974,8170,SRX10725856,SRS8815708,SRA1226279,Universidade Federal de Pelotas|CDTec,Universidade Federal de Pelotas,1,0.80843,,0.18707,,0.92066,,0.59133,,51,,B,,usable mapping rate,illumina,miseq,unknown,random_priming,nebnext,bulk,unknown,unknown,,Brazil,2021-04-30,Adult,Adult,Gonad,Reproductive System 64252,SRR14373549,SRX10725855,SRS8815707,SRP318063,PRJNA726592,GH overexpression on gonadal microRNAome profile in zebrafish males,PRJNA726592,Other,Evaluate computationally the kinetic parameters as well as to identify and quantify the set of miRNAs of the spermatozoa from gh transgenic gh+ and non transgenic NT zebrafish that may be correlated with low spermatic quality.,,,,Non transgenic 5,NT3,,strain:F0104|age:15 month|dev stage:adult|sex:male|tissue:gonadal|biological replicate:3|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of Danio rerio: adult male gonad,NT3,NT3,NEBNext Small RNA Library Prep Set,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,Illumina MiSeq,,SRP318063,,,PoolUFPEL-NT5.fastq,fastq,234366114.0,4595414.0,PoolUFPEL NT5.fastq,0:51 1:0,A:58011123;C:51898677;G:69581397;T:54869614;N:5303,51,0,,,58011123,51898677,69581397,54869614,5303,SRX10725855,SRS8815707,SRA1226279,Universidade Federal de Pelotas|CDTec,Universidade Federal de Pelotas,1,0.83352,,0.35958,,0.85928,,0.50004,,51,,B,,usable mapping rate,illumina,miseq,unknown,random_priming,nebnext,bulk,unknown,unknown,,Brazil,2021-04-30,Adult,Adult,Gonad,Reproductive System 64253,SRR14373550,SRX10725854,SRS8815706,SRP318063,PRJNA726592,GH overexpression on gonadal microRNAome profile in zebrafish males,PRJNA726592,Other,Evaluate computationally the kinetic parameters as well as to identify and quantify the set of miRNAs of the spermatozoa from gh transgenic gh+ and non transgenic NT zebrafish that may be correlated with low spermatic quality.,,,,Non transgenic 3,NT2,,strain:F0104|age:15 month|dev stage:adult|sex:male|tissue:gonadal|biological replicate:2|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of Danio rerio: adult male gonad,NT2,NT2,NEBNext Small RNA Library Prep Set,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,Illumina MiSeq,,SRP318063,,,PoolUFPEL-NT3.fastq,fastq,147963750.0,2901250.0,PoolUFPEL NT3.fastq,0:51 1:0,A:37528568;C:33498521;G:41979920;T:34953411;N:3330,51,0,,,37528568,33498521,41979920,34953411,3330,SRX10725854,SRS8815706,SRA1226279,Universidade Federal de Pelotas|CDTec,Universidade Federal de Pelotas,1,0.75277,,0.34872,,0.86596,,0.53154,,51,,B,,usable mapping rate,illumina,miseq,unknown,random_priming,nebnext,bulk,unknown,unknown,,Brazil,2021-04-30,Adult,Adult,Gonad,Reproductive System 64254,SRR14373551,SRX10725853,SRS8815705,SRP318063,PRJNA726592,GH overexpression on gonadal microRNAome profile in zebrafish males,PRJNA726592,Other,Evaluate computationally the kinetic parameters as well as to identify and quantify the set of miRNAs of the spermatozoa from gh transgenic gh+ and non transgenic NT zebrafish that may be correlated with low spermatic quality.,,,,Non transgenic 1,NT1,,strain:F0104|age:15 month|dev stage:adult|sex:male|tissue:gonadal|biological replicate:1|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of Danio rerio: adult male gonad,NT1,NT1,NEBNext Small RNA Library Prep Set,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,Illumina MiSeq,,SRP318063,,,PoolUFPEL-NT1.fastq,fastq,218363538.0,4281638.0,PoolUFPEL NT1.fastq,0:51 1:0,A:53115431;C:47639482;G:65248144;T:52355651;N:4830,51,0,,,53115431,47639482,65248144,52355651,4830,SRX10725853,SRS8815705,SRA1226279,Universidade Federal de Pelotas|CDTec,Universidade Federal de Pelotas,1,0.83996,,0.3606,,0.87728,,0.50828,,51,,B,,usable mapping rate,illumina,miseq,unknown,random_priming,nebnext,bulk,unknown,unknown,,Brazil,2021-04-30,Adult,Adult,Gonad,Reproductive System 66123,SRR15927834,SRX12217978,SRS10194180,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate1,,0.1MPa Ovary 1,,strain:12|dev stage:adult|sex:female|tissue:Ovary|treatment:control|BioSampleModel:Model organism or animal,,,,,,,,,0.1MPa Ovary 1,0.1MPa Ovary 1,0.1MPa Ovary 1,control,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,0.1MPa_Ovary_1_1.fq.gz 0.1MPa_Ovary_1_2.fq.gz,fastq fastq,10862543700.0,36208479.0,0.1MPa Ovary 1 1.fq.gz,0:150 1:150,A:2894240495;C:2560777273;G:2531715512;T:2875585409;N:225011,150,150,,,2894240495,2560777273,2531715512,2875585409,225011,SRX12217978,SRS10194180,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94988,0.94986,0.02351,0.02382,0.73561,0.73612,0.46584,0.47019,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66132,SRR15927798,SRX12217969,SRS10194172,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate4,,9MPa Ovary 4,,strain:45|dev stage:adult|sex:female|tissue:Ovary|treatment:9MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,9MPa Ovary 4,9MPa Ovary 4,9MPa Ovary 4,9MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,9MPa_Ovary_4_1.fq.gz 9MPa_Ovary_4_2.fq.gz,fastq fastq,6603618300.0,22012061.0,9MPa Ovary 4 1.fq.gz,0:150 1:150,A:1779320284;C:1537001315;G:1528659678;T:1758598616;N:38407,150,150,,,1779320284,1537001315,1528659678,1758598616,38407,SRX12217969,SRS10194172,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94012,0.93893,0.02784,0.02771,0.75049,0.75053,0.484,0.48443,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66133,SRR15927799,SRX12217968,SRS10194171,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate3,,9MPa Ovary 3,,strain:44|dev stage:adult|sex:female|tissue:Ovary|treatment:9MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,9MPa Ovary 3,9MPa Ovary 3,9MPa Ovary 3,9MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,9MPa_Ovary_3_1.fq.gz 9MPa_Ovary_3_2.fq.gz,fastq fastq,6180447600.0,20601492.0,9MPa Ovary 3 1.fq.gz,0:150 1:150,A:1627126589;C:1470012698;G:1465305974;T:1617975959;N:26380,150,150,,,1627126589,1470012698,1465305974,1617975959,26380,SRX12217968,SRS10194171,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94824,0.9472,0.02796,0.02788,0.73385,0.73415,0.47694,0.47771,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66134,SRR15927800,SRX12217967,SRS10194170,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate2,,9MPa Ovary 2,,strain:43|dev stage:adult|sex:female|tissue:Ovary|treatment:9MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,9MPa Ovary 2,9MPa Ovary 2,9MPa Ovary 2,9MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,9MPa_Ovary_2_1.fq.gz 9MPa_Ovary_2_2.fq.gz,fastq fastq,6476028000.0,21586760.0,9MPa Ovary 2 1.fq.gz,0:150 1:150,A:1700446568;C:1545340159;G:1538537789;T:1691673274;N:30210,150,150,,,1700446568,1545340159,1538537789,1691673274,30210,SRX12217967,SRS10194170,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94327,0.94123,0.02374,0.02362,0.73864,0.73959,0.48447,0.48229,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66135,SRR15927801,SRX12217966,SRS10194169,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate1,,9MPa Ovary 1,,strain:42|dev stage:adult|sex:female|tissue:Ovary|treatment:9MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,9MPa Ovary 1,9MPa Ovary 1,9MPa Ovary 1,9MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,9MPa_Ovary_1_1.fq.gz 9MPa_Ovary_1_2.fq.gz,fastq fastq,6663274500.0,22210915.0,9MPa Ovary 1 1.fq.gz,0:150 1:150,A:1775158617;C:1569628006;G:1560659846;T:1757795586;N:32445,150,150,,,1775158617,1569628006,1560659846,1757795586,32445,SRX12217966,SRS10194169,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94612,0.94504,0.02641,0.02643,0.74201,0.74268,0.48669,0.48583,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66149,SRR15927815,SRX12217952,SRS10194155,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate4,,5MPa Ovary 4,,strain:30|dev stage:adult|sex:female|tissue:Ovary|treatment:5MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,5MPa Ovary 4,5MPa Ovary 4,5MPa Ovary 4,5MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,5MPa_Ovary_4_1.fq.gz 5MPa_Ovary_4_2.fq.gz,fastq fastq,6309642000.0,21032140.0,5MPa Ovary 4 1.fq.gz,0:150 1:150,A:1656235570;C:1505169076;G:1498911945;T:1649295121;N:30288,150,150,,,1656235570,1505169076,1498911945,1649295121,30288,SRX12217952,SRS10194155,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94431,0.94311,0.02621,0.02568,0.73034,0.73074,0.48008,0.47526,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66150,SRR15927816,SRX12217951,SRS10194154,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate3,,5MPa Ovary 3,,strain:29|dev stage:adult|sex:female|tissue:Ovary|treatment:5MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,5MPa Ovary 3,5MPa Ovary 3,5MPa Ovary 3,5MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,5MPa_Ovary_3_1.fq.gz 5MPa_Ovary_3_2.fq.gz,fastq fastq,6453043800.0,21510146.0,5MPa Ovary 3 1.fq.gz,0:150 1:150,A:1727465382;C:1511929423;G:1503545573;T:1710073006;N:30416,150,150,,,1727465382,1511929423,1503545573,1710073006,30416,SRX12217951,SRS10194154,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94329,0.94219,0.02613,0.02608,0.74921,0.75024,0.48417,0.48323,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66151,SRR15927817,SRX12217950,SRS10194152,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate2,,5MPa Ovary 2,,strain:28|dev stage:adult|sex:female|tissue:Ovary|treatment:5MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,5MPa Ovary 2,5MPa Ovary 2,5MPa Ovary 2,5MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,5MPa_Ovary_2_1.fq.gz 5MPa_Ovary_2_2.fq.gz,fastq fastq,6538194000.0,21793980.0,5MPa Ovary 2 1.fq.gz,0:150 1:150,A:1722214303;C:1557609494;G:1549380059;T:1708960043;N:30101,150,150,,,1722214303,1557609494,1549380059,1708960043,30101,SRX12217950,SRS10194152,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.93911,0.93965,0.02225,0.02225,0.74631,0.74726,0.48604,0.48641,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66152,SRR15927818,SRX12217949,SRS10194151,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate1,,5MPa Ovary 1,,strain:27|dev stage:adult|sex:female|tissue:Ovary|treatment:5MPa4h|BioSampleModel:Model organism or animal,,,,,,,,,5MPa Ovary 1,5MPa Ovary 1,5MPa Ovary 1,5MPa4h,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,5MPa_Ovary_1_1.fq.gz 5MPa_Ovary_1_2.fq.gz,fastq fastq,6462261600.0,21540872.0,5MPa Ovary 1 1.fq.gz,0:150 1:150,A:1694181375;C:1543750310;G:1539478533;T:1684821344;N:30038,150,150,,,1694181375,1543750310,1539478533,1684821344,30038,SRX12217949,SRS10194151,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94437,0.94308,0.02641,0.02654,0.73099,0.73249,0.4791,0.48649,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66165,SRR15927831,SRX12217936,SRS10194138,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate4,,0.1MPa Ovary 4,,strain:15|dev stage:adult|sex:female|tissue:Ovary|treatment:control|BioSampleModel:Model organism or animal,,,,,,,,,0.1MPa Ovary 4,0.1MPa Ovary 4,0.1MPa Ovary 4,control,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,0.1MPa_Ovary_4_1.fq.gz 0.1MPa_Ovary_4_2.fq.gz,fastq fastq,15343948800.0,51146496.0,0.1MPa Ovary 4 1.fq.gz,0:150 1:150,A:4004450655;C:3680157109;G:3680155153;T:3979133999;N:51884,150,150,,,4004450655,3680157109,3680155153,3979133999,51884,SRX12217936,SRS10194138,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.93796,0.937,0.02026,0.0202,0.74556,0.74586,0.4783,0.47884,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66166,SRR15927832,SRX12217935,SRS10194153,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate3,,0.1MPa Ovary 3,,strain:14|dev stage:adult|sex:female|tissue:Ovary|treatment:control|BioSampleModel:Model organism or animal,,,,,,,,,0.1MPa Ovary 3,0.1MPa Ovary 3,0.1MPa Ovary 3,control,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,0.1MPa_Ovary_3_1.fq.gz 0.1MPa_Ovary_3_2.fq.gz,fastq fastq,16560024300.0,55200081.0,0.1MPa Ovary 3 1.fq.gz,0:150 1:150,A:4283944324;C:4008319049;G:4000417288;T:4267138730;N:204909,150,150,,,4283944324,4008319049,4000417288,4267138730,204909,SRX12217935,SRS10194153,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.94132,0.94088,0.01873,0.0187,0.74117,0.74109,0.47368,0.47603,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 66167,SRR15927833,SRX12217934,SRS10194137,SRP337553,PRJNA764015,Short Term High Hydrostatic Pressure Responses at Gene Expression Level in Zebrafish,PRJNA764015,Other,the RNA seq data of four tissues of zebrafish treated by high hydrostatic pressure,,,replicate2,,0.1MPa Ovary 2,,strain:13|dev stage:adult|sex:female|tissue:Ovary|treatment:control|BioSampleModel:Model organism or animal,,,,,,,,,0.1MPa Ovary 2,0.1MPa Ovary 2,0.1MPa Ovary 2,control,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP337553,,,0.1MPa_Ovary_2_1.fq.gz 0.1MPa_Ovary_2_2.fq.gz,fastq fastq,10538992800.0,35129976.0,0.1MPa Ovary 2 1.fq.gz,0:150 1:150,A:2744680055;C:2535542414;G:2530570279;T:2727905123;N:294929,150,150,,,2744680055,2535542414,2530570279,2727905123,294929,SRX12217934,SRS10194137,SRA1295954,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,2,0.9332,0.93313,0.02252,0.02272,0.73841,0.73852,0.46992,0.4767,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-09-17,Adult,Adult,Gonad,Reproductive System 76734,SRR25361306,SRX21100653,SRS18369835,SRP450509,PRJNA996758,Transcriptome analysis of Zebrafish testis,PRJNA996758,Other,In summary this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.,,,,,Zebrafish 3N 3,,strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 6|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of triploid zebrafish: mature testis 3,S06,S06,small RNA Sample Pre Kit,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,HiSeq X Ten,,SRP450509,,,Zebrafish-3N-3.fq,fastq,377566667.0,15350070.0,Zebrafish 3N 3.fq,0:24.60,A:96137966;C:76631652;G:87723617;T:117047567;N:25865,24,,,,96137966,76631652,87723617,117047567,25865,SRX21100653,SRS18369835,SRA1676237,Hunan Normal University|College of Life Sciences,Hunan Normal University,1,0.73654,,0.40118,,0.8564,,0.55134,,20,,B,,usable mapping rate,illumina,hiseq_era,full_length,random_priming,unknown,bulk,unknown,unknown,,China,2023-07-20,Adult,Adult,Gonad,Reproductive System 76735,SRR25361307,SRX21100652,SRS18369834,SRP450509,PRJNA996758,Transcriptome analysis of Zebrafish testis,PRJNA996758,Other,In summary this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.,,,,,Zebrafish 3N 2,,strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 5|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of triploid zebrafish: mature testis 2,S05,S05,small RNA Sample Pre Kit,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,HiSeq X Ten,,SRP450509,,,Zebrafish-3N-2.fq,fastq,380484856.0,15447197.0,Zebrafish 3N 2.fq,0:24.63,A:97242128;C:77738745;G:86938175;T:118539773;N:26035,24,,,,97242128,77738745,86938175,118539773,26035,SRX21100652,SRS18369834,SRA1676237,Hunan Normal University|College of Life Sciences,Hunan Normal University,1,0.75732,,0.36733,,0.86003,,0.56474,,30,,B,,usable mapping rate,illumina,hiseq_era,full_length,random_priming,unknown,bulk,unknown,unknown,,China,2023-07-20,Adult,Adult,Gonad,Reproductive System 76736,SRR25361308,SRX21100651,SRS18369833,SRP450509,PRJNA996758,Transcriptome analysis of Zebrafish testis,PRJNA996758,Other,In summary this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.,,,,,Zebrafish 3N 1,,strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 4|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of triploid zebrafish: mature testis 1,S04,S04,small RNA Sample Pre Kit,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,HiSeq X Ten,,SRP450509,,,Zebrafish-3N-1.fq,fastq,268097774.0,10780393.0,Zebrafish 3N 1.fq,0:24.87,A:68574209;C:53994512;G:62001426;T:83509528;N:18099,24,,,,68574209,53994512,62001426,83509528,18099,SRX21100651,SRS18369833,SRA1676237,Hunan Normal University|College of Life Sciences,Hunan Normal University,1,0.76185,,0.39184,,0.86038,,0.55005,,27,,B,,usable mapping rate,illumina,hiseq_era,full_length,random_priming,unknown,bulk,unknown,unknown,,China,2023-07-20,Adult,Adult,Gonad,Reproductive System 76737,SRR25361309,SRX21100650,SRS18369832,SRP450509,PRJNA996758,Transcriptome analysis of Zebrafish testis,PRJNA996758,Other,In summary this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.,,,,,Zebrafish 2N 3,,strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 3|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of diploid zebrafish: mature testis 3,S03,S03,small RNA Sample Pre Kit,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,HiSeq X Ten,,SRP450509,,,Zebrafish-2N-3.fq,fastq,534146242.0,21237464.0,Zebrafish 2N 3.fq,0:25.15,A:134813196;C:109988603;G:122363487;T:166967106;N:13850,25,,,,134813196,109988603,122363487,166967106,13850,SRX21100650,SRS18369832,SRA1676237,Hunan Normal University|College of Life Sciences,Hunan Normal University,1,0.78557,,0.41489,,0.84682,,0.52155,,26,,B,,usable mapping rate,illumina,hiseq_era,full_length,random_priming,unknown,bulk,unknown,unknown,,China,2023-07-20,Adult,Adult,Gonad,Reproductive System 76738,SRR25361310,SRX21100649,SRS18369831,SRP450509,PRJNA996758,Transcriptome analysis of Zebrafish testis,PRJNA996758,Other,In summary this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.,,,,,Zebrafish 2N 2,,strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 2|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of diploid zebrafish: mature testis 2,S02,S02,small RNA Sample Pre Kit,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,HiSeq X Ten,,SRP450509,,,Zebrafish-2N-2.fq,fastq,356097642.0,14145771.0,Zebrafish 2N 2.fq,0:25.17,A:90441485;C:73979402;G:81604410;T:110063163;N:9182,25,,,,90441485,73979402,81604410,110063163,9182,SRX21100649,SRS18369831,SRA1676237,Hunan Normal University|College of Life Sciences,Hunan Normal University,1,0.75286,,0.42266,,0.8561,,0.55388,,25,,B,,usable mapping rate,illumina,hiseq_era,full_length,random_priming,unknown,bulk,unknown,unknown,,China,2023-07-20,Adult,Adult,Gonad,Reproductive System 76739,SRR25361311,SRX21100648,SRS18369830,SRP450509,PRJNA996758,Transcriptome analysis of Zebrafish testis,PRJNA996758,Other,In summary this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.,,,,,Zebrafish 2N 1,,strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 1|BioSampleModel:Model organism or animal,,,,,,,,,miRNA Seq of diploid zebrafish: mature testis 1,S01,S01,small RNA Sample Pre Kit,,,miRNA-Seq,TRANSCRIPTOMIC,PCR,SINGLE,ILLUMINA,HiSeq X Ten,,SRP450509,,,Zebrafish-2N-1.fq,fastq,304073792.0,11993451.0,Zebrafish 2N 1.fq,0:25.35,A:78785751;C:62508430;G:69338558;T:93420600;N:20453,25,,,,78785751,62508430,69338558,93420600,20453,SRX21100648,SRS18369830,SRA1676237,Hunan Normal University|College of Life Sciences,Hunan Normal University,1,0.77026,,0.38872,,0.86032,,0.58206,,23,,B,,usable mapping rate,illumina,hiseq_era,full_length,random_priming,unknown,bulk,unknown,unknown,,China,2023-07-20,Adult,Adult,Gonad,Reproductive System