rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
70846,SRR20822767,SRX16842343,SRS14446856,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 6,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 6|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 39,ZF 39,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP389580,,,ZF_Tu2_10_R1.fastq.gz ZF_Tu2_10_R2.fastq.gz ZF_Tu2_11_R1.fastq.gz ZF_Tu2_11_R2.fastq.gz ZF_Tu2_12_R1.fastq.gz ZF_Tu2_12_R2.fastq.gz ZF_Tu2_13_R1.fastq.gz ZF_Tu2_13_R2.fastq.gz ZF_Tu2_14_R1.fastq.gz ZF_Tu2_14_R2.fastq.gz ZF_Tu2_15_R1.fastq.gz ZF_Tu2_15_R2.fastq.gz ZF_Tu2_16_R1.fastq.gz ZF_Tu2_16_R2.fastq.gz ZF_Tu2_1_R1.fastq.gz ZF_Tu2_1_R2.fastq.gz ZF_Tu2_2_R1.fastq.gz ZF_Tu2_2_R2.fastq.gz ZF_Tu2_3_R1.fastq.gz ZF_Tu2_3_R2.fastq.gz ZF_Tu2_4_R1.fastq.gz ZF_Tu2_4_R2.fastq.gz ZF_Tu2_5_R1.fastq.gz ZF_Tu2_5_R2.fastq.gz ZF_Tu2_6_R1.fastq.gz ZF_Tu2_6_R2.fastq.gz ZF_Tu2_7_R1.fastq.gz ZF_Tu2_7_R2.fastq.gz ZF_Tu2_8_R1.fastq.gz ZF_Tu2_8_R2.fastq.gz ZF_Tu2_9_R1.fastq.gz ZF_Tu2_9_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,19600815900.0,39045450.0,ZF Tu2 10 R1.fastq.gz,0:251 1:251,A:5586816283;C:3957164453;G:4183919538;T:5872635753;N:279873,251,251,,,5586816283,3957164453,4183919538,5872635753,279873,SRX16842343,SRS14446856,SRA1468938,Max Planck Institut|Boehm,Max Planck Institut,2,0.23669,0.0002,0.00499,0.00015,0.98908,0.99993,0.27742,0.8,251,251,B,T,mate2 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70847,SRR20822058,SRX16841660,SRS14446856,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 6,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 6|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 37,ZF 37,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP389580,,,ZF_Tu2_10_R1.fastq.gz ZF_Tu2_10_R2.fastq.gz ZF_Tu2_11_R1.fastq.gz ZF_Tu2_11_R2.fastq.gz ZF_Tu2_12_R1.fastq.gz ZF_Tu2_12_R2.fastq.gz ZF_Tu2_13_R1.fastq.gz ZF_Tu2_13_R2.fastq.gz ZF_Tu2_14_R1.fastq.gz ZF_Tu2_14_R2.fastq.gz ZF_Tu2_15_R1.fastq.gz ZF_Tu2_15_R2.fastq.gz ZF_Tu2_16_R1.fastq.gz ZF_Tu2_16_R2.fastq.gz ZF_Tu2_1_R1.fastq.gz ZF_Tu2_1_R2.fastq.gz ZF_Tu2_2_R1.fastq.gz ZF_Tu2_2_R2.fastq.gz ZF_Tu2_3_R1.fastq.gz ZF_Tu2_3_R2.fastq.gz ZF_Tu2_4_R1.fastq.gz ZF_Tu2_4_R2.fastq.gz ZF_Tu2_5_R1.fastq.gz ZF_Tu2_5_R2.fastq.gz ZF_Tu2_6_R1.fastq.gz ZF_Tu2_6_R2.fastq.gz ZF_Tu2_7_R1.fastq.gz ZF_Tu2_7_R2.fastq.gz ZF_Tu2_8_R1.fastq.gz ZF_Tu2_8_R2.fastq.gz ZF_Tu2_9_R1.fastq.gz ZF_Tu2_9_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,28345644856.0,56465428.0,ZF Tu2 10 R1.fastq.gz,0:251 1:251,A:8023828983;C:5867289387;G:5956780834;T:8497336426;N:409226,251,251,,,8023828983,5867289387,5956780834,8497336426,409226,SRX16841660,SRS14446856,SRA1468916,Max Planck Institut|Boehm,Max Planck Institut,2,0.24302,0.00391,0.0049,0.0036,0.98766,0.99965,0.25169,0.2619,251,251,B,T,mate2 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70848,SRR20821267,SRX16840871,SRS14445862,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 5,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 5|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 5,ZF 15 5,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,ZF_5_01_R1.fastq.gz ZF_5_01_R2.fastq.gz ZF_5_02_R1.fastq.gz ZF_5_02_R2.fastq.gz ZF_5_03_R1.fastq.gz ZF_5_03_R2.fastq.gz ZF_5_04_R1.fastq.gz ZF_5_04_R2.fastq.gz ZF_5_05_R1.fastq.gz ZF_5_05_R2.fastq.gz ZF_5_06_R1.fastq.gz ZF_5_06_R2.fastq.gz ZF_5_07_R1.fastq.gz ZF_5_07_R2.fastq.gz ZF_5_08_R1.fastq.gz ZF_5_08_R2.fastq.gz ZF_5_09_R1.fastq.gz ZF_5_09_R2.fastq.gz ZF_5_10_R1.fastq.gz ZF_5_10_R2.fastq.gz ZF_5_11_R1.fastq.gz ZF_5_11_R2.fastq.gz ZF_5_12_R1.fastq.gz ZF_5_12_R2.fastq.gz ZF_5_13_R1.fastq.gz ZF_5_13_R2.fastq.gz ZF_5_14_R1.fastq.gz ZF_5_14_R2.fastq.gz ZF_5_15_R1.fastq.gz ZF_5_15_R2.fastq.gz ZF_5_16_R1.fastq.gz ZF_5_16_R2.fastq.gz ZF_5_17_R1.fastq.gz ZF_5_17_R2.fastq.gz ZF_5_18_R1.fastq.gz ZF_5_18_R2.fastq.gz ZF_5_19_R1.fastq.gz ZF_5_19_R2.fastq.gz ZF_5_20_R1.fastq.gz ZF_5_20_R2.fastq.gz ZF_5_21_R1.fastq.gz ZF_5_21_R2.fastq.gz ZF_5_22_R1.fastq.gz ZF_5_22_R2.fastq.gz ZF_5_23_R1.fastq.gz ZF_5_23_R2.fastq.gz ZF_5_24_R1.fastq.gz ZF_5_24_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,20320004000.0,40640008.0,ZF 5 01 R1.fastq.gz,0:250 1:250,A:5513136568;C:4158821282;G:4255839821;T:6389137086;N:3069243,250,250,,,5513136568,4158821282,4255839821,6389137086,3069243,SRX16840871,SRS14445862,SRA1468898,Max Planck Institut|Boehm,Max Planck Institut,2,0.48427,3e-05,0.0017,1e-05,0.99663,0.99997,0.55487,1.0,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70849,SRR20821266,SRX16840870,SRS14445861,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 4,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 4|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 4,ZF 15 4,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,ZF_4_01_R1.fastq.gz ZF_4_01_R2.fastq.gz ZF_4_02_R1.fastq.gz ZF_4_02_R2.fastq.gz ZF_4_03_R1.fastq.gz ZF_4_03_R2.fastq.gz ZF_4_04_R1.fastq.gz ZF_4_04_R2.fastq.gz ZF_4_05_R1.fastq.gz ZF_4_05_R2.fastq.gz ZF_4_06_R1.fastq.gz ZF_4_06_R2.fastq.gz ZF_4_07_R1.fastq.gz ZF_4_07_R2.fastq.gz ZF_4_08_R1.fastq.gz ZF_4_08_R2.fastq.gz ZF_4_09_R1.fastq.gz ZF_4_09_R2.fastq.gz ZF_4_10_R1.fastq.gz ZF_4_10_R2.fastq.gz ZF_4_11_R1.fastq.gz ZF_4_11_R2.fastq.gz ZF_4_12_R1.fastq.gz ZF_4_12_R2.fastq.gz ZF_4_13_R1.fastq.gz ZF_4_13_R2.fastq.gz ZF_4_14_R1.fastq.gz ZF_4_14_R2.fastq.gz ZF_4_15_R1.fastq.gz ZF_4_15_R2.fastq.gz ZF_4_16_R1.fastq.gz ZF_4_16_R2.fastq.gz ZF_4_17_R1.fastq.gz ZF_4_17_R2.fastq.gz ZF_4_18_R1.fastq.gz ZF_4_18_R2.fastq.gz ZF_4_19_R1.fastq.gz ZF_4_19_R2.fastq.gz ZF_4_20_R1.fastq.gz ZF_4_20_R2.fastq.gz ZF_4_21_R1.fastq.gz ZF_4_21_R2.fastq.gz ZF_4_22_R1.fastq.gz ZF_4_22_R2.fastq.gz ZF_4_23_R1.fastq.gz ZF_4_23_R2.fastq.gz ZF_4_24_R1.fastq.gz ZF_4_24_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,26480052500.0,52960105.0,ZF 4 01 R1.fastq.gz,0:250 1:250,A:7438425276;C:5364918772;G:5496497801;T:8176167902;N:4042749,250,250,,,7438425276,5364918772,5496497801,8176167902,4042749,SRX16840870,SRS14445861,SRA1468898,Max Planck Institut|Boehm,Max Planck Institut,2,0.21859,0.00094,0.00058,0.00078,0.99734,0.99989,0.24747,0.38095,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70850,SRR20821265,SRX16840869,SRS14445860,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 3,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 3|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 3,ZF 15 3,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,ZF_3_01_R1.fastq.gz ZF_3_04_R1.fastq.gz ZF_3_04_R2.fastq.gz ZF_3_05_R1.fastq.gz ZF_3_05_R2.fastq.gz ZF_3_06_R1.fastq.gz ZF_3_06_R2.fastq.gz ZF_3_07_R1.fastq.gz ZF_3_07_R2.fastq.gz ZF_3_08_R1.fastq.gz ZF_3_08_R2.fastq.gz ZF_3_09_R1.fastq.gz ZF_3_09_R2.fastq.gz ZF_3_10_R1.fastq.gz ZF_3_10_R2.fastq.gz ZF_3_11_R1.fastq.gz ZF_3_11_R2.fastq.gz ZF_3_12_R1.fastq.gz ZF_3_12_R2.fastq.gz ZF_3_13_R1.fastq.gz ZF_3_13_R2.fastq.gz ZF_3_14_R1.fastq.gz ZF_3_14_R2.fastq.gz ZF_3_15_R1.fastq.gz ZF_3_15_R2.fastq.gz ZF_3_16_R1.fastq.gz ZF_3_16_R2.fastq.gz ZF_3_17_R1.fastq.gz ZF_3_17_R2.fastq.gz ZF_3_18_R1.fastq.gz ZF_3_18_R2.fastq.gz ZF_3_19_R1.fastq.gz ZF_3_19_R2.fastq.gz ZF_3_03_R2.fastq.gz ZF_3_03_R1.fastq.gz ZF_3_02_R2.fastq.gz ZF_3_02_R1.fastq.gz ZF_3_01_R2.fastq.gz ZF_3_20_R1.fastq.gz ZF_3_20_R2.fastq.gz ZF_3_21_R1.fastq.gz ZF_3_21_R2.fastq.gz ZF_3_22_R1.fastq.gz ZF_3_22_R2.fastq.gz ZF_3_23_R1.fastq.gz ZF_3_23_R2.fastq.gz ZF_3_24_R1.fastq.gz ZF_3_24_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,29081958500.0,58163917.0,ZF 3 01 R1.fastq.gz,0:250 1:250,A:7805451909;C:6022172769;G:6087748826;T:9162169304;N:4415692,250,250,,,7805451909,6022172769,6087748826,9162169304,4415692,SRX16840869,SRS14445860,SRA1468898,Max Planck Institut|Boehm,Max Planck Institut,2,0.62325,0.00106,0.0032,0.00082,0.98957,0.99979,0.66228,0.16,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70851,SRR20821268,SRX16840868,SRS14446084,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 2,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 2|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 2,ZF 15 2,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,ZF_2_01_R1.fastq.gz ZF_2_01_R2.fastq.gz ZF_2_02_R1.fastq.gz ZF_2_02_R2.fastq.gz ZF_2_03_R1.fastq.gz ZF_2_03_R2.fastq.gz ZF_2_04_R1.fastq.gz ZF_2_04_R2.fastq.gz ZF_2_05_R1.fastq.gz ZF_2_05_R2.fastq.gz ZF_2_06_R1.fastq.gz ZF_2_06_R2.fastq.gz ZF_2_07_R1.fastq.gz ZF_2_07_R2.fastq.gz ZF_2_08_R1.fastq.gz ZF_2_08_R2.fastq.gz ZF_2_09_R1.fastq.gz ZF_2_09_R2.fastq.gz ZF_2_10_R1.fastq.gz ZF_2_10_R2.fastq.gz ZF_2_11_R1.fastq.gz ZF_2_11_R2.fastq.gz ZF_2_12_R1.fastq.gz ZF_2_12_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,11339660500.0,22679321.0,ZF 2 01 R1.fastq.gz,0:250 1:250,A:3182635402;C:2291052382;G:2349897358;T:3514348167;N:1727191,250,250,,,3182635402,2291052382,2349897358,3514348167,1727191,SRX16840868,SRS14446084,SRA1468898,Max Planck Institut|Boehm,Max Planck Institut,2,0.27918,0.0001,0.00045,9e-05,0.99701,1.0,0.09245,,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70852,SRR20821269,SRX16840867,SRS14416088,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 1,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 1,ZF 15 1,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,ZF_1_01_R1.fastq.gz ZF_1_01_R2.fastq.gz ZF_1_02_R1.fastq.gz ZF_1_02_R2.fastq.gz ZF_1_03_R1.fastq.gz ZF_1_03_R2.fastq.gz ZF_1_04_R1.fastq.gz ZF_1_04_R2.fastq.gz ZF_1_05_R1.fastq.gz ZF_1_05_R2.fastq.gz ZF_1_06_R1.fastq.gz ZF_1_06_R2.fastq.gz ZF_1_07_R1.fastq.gz ZF_1_07_R2.fastq.gz ZF_1_08_R1.fastq.gz ZF_1_08_R2.fastq.gz ZF_1_09_R1.fastq.gz ZF_1_09_R2.fastq.gz ZF_1_10_R1.fastq.gz ZF_1_10_R2.fastq.gz ZF_1_11_R1.fastq.gz ZF_1_11_R2.fastq.gz ZF_1_12_R1.fastq.gz ZF_1_12_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,11128555000.0,22257110.0,ZF 1 01 R1.fastq.gz,0:250 1:250,A:3130611303;C:2262908040;G:2314518134;T:3418822646;N:1694877,250,250,,,3130611303,2262908040,2314518134,3418822646,1694877,SRX16840867,SRS14416088,SRA1468898,Max Planck Institut|Boehm,Max Planck Institut,2,0.26276,0.0002,0.00063,0.00019,0.99669,1.0,0.16038,,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70853,SRR20821016,SRX16840621,SRS14445862,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 5,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 5|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 5,ZF 15 5,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,Fish_5_s1_R1.fastq.gz Fish_5_s1_R2.fastq.gz Fish_5_s2_R1.fastq.gz Fish_5_s2_R2.fastq.gz Fish_5_s3_R1.fastq.gz Fish_5_s3_R2.fastq.gz Fish_5_s4_R1.fastq.gz Fish_5_s4_R2.fastq.gz Fish_5_s5_R1.fastq.gz Fish_5_s5_R2.fastq.gz Fish_5_s6_R1.fastq.gz Fish_5_s6_R2.fastq.gz Fish_5_s7_R1.fastq.gz Fish_5_s7_R2.fastq.gz Fish_5_s8_R1.fastq.gz Fish_5_s8_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,12404050000.0,24808100.0,Fish 5 s1 R1.fastq.gz,0:250 1:250,A:3320455167;C:2599567608;G:2616971343;T:3833147517;N:33908365,250,250,,,3320455167,2599567608,2616971343,3833147517,33908365,SRX16840621,SRS14445862,SRA1468889,Max Planck Institut|Boehm,Max Planck Institut,2,0.46656,1e-05,0.00102,0.0,0.99715,1.0,0.67642,,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70854,SRR20821017,SRX16840620,SRS14445861,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 4,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 4|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 4,ZF 15 4,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,Fish_4_s1_R1.fastq.gz Fish_4_s1_R2.fastq.gz Fish_4_s2_R1.fastq.gz Fish_4_s2_R2.fastq.gz Fish_4_s3_R1.fastq.gz Fish_4_s3_R2.fastq.gz Fish_4_s4_R1.fastq.gz Fish_4_s4_R2.fastq.gz Fish_4_s5_R1.fastq.gz Fish_4_s5_R2.fastq.gz Fish_4_s6_R1.fastq.gz Fish_4_s6_R2.fastq.gz Fish_4_s7_R1.fastq.gz Fish_4_s7_R2.fastq.gz Fish_4_s8_R1.fastq.gz Fish_4_s8_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,14690229000.0,29380458.0,Fish 4 s1 R1.fastq.gz,0:250 1:250,A:4100988732;C:3028728956;G:3105063955;T:4415320433;N:40126924,250,250,,,4100988732,3028728956,3105063955,4415320433,40126924,SRX16840620,SRS14445861,SRA1468889,Max Planck Institut|Boehm,Max Planck Institut,2,0.20173,4e-05,9e-05,3e-05,0.99886,0.99997,0.02749,0.0,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70855,SRR20821018,SRX16840619,SRS14445860,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 3,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 3|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 3,ZF 15 3,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,Fish_3_s1_R1.fastq.gz Fish_3_s1_R2.fastq.gz Fish_3_s2_R1.fastq.gz Fish_3_s2_R2.fastq.gz Fish_3_s3_R1.fastq.gz Fish_3_s3_R2.fastq.gz Fish_3_s4_R1.fastq.gz Fish_3_s4_R2.fastq.gz Fish_3_s5_R1.fastq.gz Fish_3_s5_R2.fastq.gz Fish_3_s6_R1.fastq.gz Fish_3_s6_R2.fastq.gz Fish_3_s7_R1.fastq.gz Fish_3_s7_R2.fastq.gz Fish_3_s8_R1.fastq.gz Fish_3_s8_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,11142784000.0,22285568.0,Fish 3 s1 R1.fastq.gz,0:250 1:250,A:2958284498;C:2329155931;G:2358380909;T:3466617016;N:30345646,250,250,,,2958284498,2329155931,2358380909,3466617016,30345646,SRX16840619,SRS14445860,SRA1468889,Max Planck Institut|Boehm,Max Planck Institut,2,0.56406,2e-05,0.00159,1e-05,0.99868,1.0,0.67877,,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70856,SRR20821019,SRX16840618,SRS14416088,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 1,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 15 1,ZF 15 1,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP389580,,,Fish_1_s1_R1.fastq.gz Fish_1_s1_R2.fastq.gz Fish_1_s2_R1.fastq.gz Fish_1_s2_R2.fastq.gz Fish_1_s3_R1.fastq.gz Fish_1_s3_R2.fastq.gz Fish_1_s4_R1.fastq.gz Fish_1_s4_R2.fastq.gz Fish_1_s5_R1.fastq.gz Fish_1_s5_R2.fastq.gz Fish_1_s6_R1.fastq.gz Fish_1_s6_R2.fastq.gz Fish_1_s7_R1.fastq.gz Fish_1_s7_R2.fastq.gz Fish_1_s8_R1.fastq.gz Fish_1_s8_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,23425111500.0,46850223.0,Fish 1 s1 R1.fastq.gz,0:250 1:250,A:6539165809;C:4856848776;G:4965848496;T:6999397120;N:63851299,250,250,,,6539165809,4856848776,4965848496,6999397120,63851299,SRX16840618,SRS14416088,SRA1468889,Max Planck Institut|Boehm,Max Planck Institut,2,0.22816,3e-05,3e-05,2e-05,0.99931,1.0,0.01795,,250,250,B,T,mate2 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70857,SRR20774919,SRX16794795,SRS14416088,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 1,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 14,ZF 14,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389580,,,ZF_1_R1.fastq.gz ZF_1_R2.fastq.gz ZF_2_R1.fastq.gz ZF_2_R2.fastq.gz ZF_3_R1.fastq.gz ZF_3_R2.fastq.gz ZF_4_R1.fastq.gz ZF_4_R2.fastq.gz ZF_5_R1.fastq.gz ZF_5_R2.fastq.gz ZF_6_R1.fastq.gz ZF_6_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,2060446800.0,3434078.0,ZF 1 R1.fastq.gz,0:300 1:300,A:583057434;C:430231786;G:436041334;T:600779904;N:10336342,300,300,,,583057434,430231786,436041334,600779904,10336342,SRX16794795,SRS14416088,SRA1467929,Max Planck Institut|Boehm,Max Planck Institut,2,0.22937,0.00332,0.00094,0.00296,0.99853,0.99977,0.07993,0.34426,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-03,Adult,Adult,Trunk,Surface Structure
70858,SRR20770403,SRX16790285,SRS14416088,SRP389580,PRJNA865512,TCR alpha and beta repseq,PRJNA865512,Other,TCR Repertoire sequencing raw reads TCR alpha and beta for several species,,pubmed:37344590,,,ZF 1,,strain:Tuebingen|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:16 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,ZF 13,ZF 13,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389580,,,ZF_1_R1.fastq.gz ZF_1_R2.fastq.gz ZF_2_R1.fastq.gz ZF_2_R2.fastq.gz ZF_3_R1.fastq.gz ZF_3_R2.fastq.gz ZF_4_R1.fastq.gz ZF_4_R2.fastq.gz ZF_5_R1.fastq.gz ZF_5_R2.fastq.gz ZF_6_R1.fastq.gz ZF_6_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,404958600.0,674931.0,ZF 1 R1.fastq.gz,0:300 1:300,A:115477181;C:85168234;G:86149957;T:118163222;N:6,300,300,,,115477181,85168234,86149957,118163222,6,SRX16790285,SRS14416088,SRA1467850,Max Planck Institut|Boehm,Max Planck Institut,2,0.22832,0.00294,0.00097,0.00267,0.9987,0.99981,0.06408,0.06382,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-03,Adult,Adult,Trunk,Surface Structure
70865,SRR21025648,SRX17041895,SRS14626477,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Cb mutant ZF,ZF B1,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Cb mutant fish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCR Cbeta mutant zebrafish repertoire,ZF B1 39,ZF B1 39,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_B_1_R1.fastq.gz ZF_B_1_R2.fastq.gz,fastq fastq,542089800.0,903483.0,ZF B 1 R1.fastq.gz,0:300 1:300,A:135658810;C:102336162;G:99078828;T:137378936;N:67637064,300,300,,,135658810,102336162,99078828,137378936,67637064,SRX17041895,SRS14626477,SRA1474283,Max Planck Institut|Boehm,Max Planck Institut,2,0.12189,0.0,0.00343,0.0,0.99504,1.0,0.39007,,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70866,SRR21025649,SRX17041894,SRS14626476,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF A3,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Ca mutant fish 3|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF A3 39,ZF A3 39,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_A_3_R1.fastq.gz ZF_A_3_R2.fastq.gz,fastq fastq,308308200.0,513847.0,ZF A 3 R1.fastq.gz,0:300 1:300,A:78000370;C:58841499;G:57272527;T:75682806;N:38510998,300,300,,,78000370,58841499,57272527,75682806,38510998,SRX17041894,SRS14626476,SRA1474283,Max Planck Institut|Boehm,Max Planck Institut,2,0.12647,0.0,0.00605,0.0,0.99492,1.0,0.53455,,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70867,SRR21025650,SRX17041893,SRS14626475,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF A2,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Ca mutant fish 2|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF A2 39,ZF A2 39,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_A_2_R1.fastq.gz ZF_A_2_R2.fastq.gz,fastq fastq,478462200.0,797437.0,ZF A 2 R1.fastq.gz,0:300 1:300,A:121169167;C:89660025;G:88748678;T:119119069;N:59765261,300,300,,,121169167,89660025,88748678,119119069,59765261,SRX17041893,SRS14626475,SRA1474283,Max Planck Institut|Boehm,Max Planck Institut,2,0.14904,0.0,0.00506,0.0,0.995,1.0,0.41067,,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70868,SRR21025651,SRX17041892,SRS14626474,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF A1,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Ca mutant fish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF A1 39,ZF A1 39,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_A_1_R1.fastq.gz ZF_A_1_R2.fastq.gz,fastq fastq,678536400.0,1130894.0,ZF A 1 R1.fastq.gz,0:300 1:300,A:171085705;C:127441930;G:123964513;T:171506152;N:84538100,300,300,,,171085705,127441930,123964513,171506152,84538100,SRX17041892,SRS14626474,SRA1474283,Max Planck Institut|Boehm,Max Planck Institut,2,0.15972,0.0,0.00626,0.0,0.99358,1.0,0.41112,,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70869,SRR21025647,SRX17041891,SRS14626540,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF e7,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF e7 39,ZF e7 39,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP389887,,,ZF_E7_1_R1.fastq.gz ZF_E7_1_R2.fastq.gz ZF_E7_2_R1.fastq.gz ZF_E7_2_R2.fastq.gz ZF_E7_3_R1.fastq.gz ZF_E7_3_R2.fastq.gz ZF_E7_4_R1.fastq.gz ZF_E7_4_R2.fastq.gz ZF_E7_5_R1.fastq.gz ZF_E7_5_R2.fastq.gz ZF_E7_6_R1.fastq.gz ZF_E7_6_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,3743030974.0,7456237.0,ZF E7 1 R1.fastq.gz,0:251 1:251,A:1059538576;C:756862432;G:800743054;T:1125844134;N:42778,251,251,,,1059538576,756862432,800743054,1125844134,42778,SRX17041891,SRS14626540,SRA1474280,Max Planck Institut|Boehm,Max Planck Institut,2,0.17475,4e-05,0.00048,3e-05,0.99606,1.0,0.06216,,251,251,B,T,mate2 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70870,SRR21025625,SRX17041869,SRS14626540,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF e7,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF e7 37,ZF e7 37,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP389887,,,ZF_E7_1_R1.fastq.gz ZF_E7_1_R2.fastq.gz ZF_E7_2_R1.fastq.gz ZF_E7_2_R2.fastq.gz ZF_E7_3_R1.fastq.gz ZF_E7_3_R2.fastq.gz ZF_E7_4_R1.fastq.gz ZF_E7_4_R2.fastq.gz ZF_E7_5_R1.fastq.gz ZF_E7_5_R2.fastq.gz ZF_E7_6_R1.fastq.gz ZF_E7_6_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,6358841530.0,12667015.0,ZF E7 1 R1.fastq.gz,0:251 1:251,A:1780832978;C:1325459337;G:1324964858;T:1927430147;N:154210,251,251,,,1780832978,1325459337,1324964858,1927430147,154210,SRX17041869,SRS14626540,SRA1474264,Max Planck Institut|Boehm,Max Planck Institut,2,0.17062,0.00202,0.00036,0.00201,0.9961,1.0,0.45331,,251,251,B,T,mate2 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70871,SRR21025558,SRX17041805,SRS14626477,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Cb mutant ZF,ZF B1,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Cb mutant fish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCR Cbeta mutant zebrafish repertoire,ZF B1 37,ZF B1 37,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_B_1_R1.fastq.gz ZF_B_1_R2.fastq.gz,fastq fastq,690565200.0,1150942.0,ZF B 1 R1.fastq.gz,0:300 1:300,A:190561034;C:142350146;G:136690824;T:190637972;N:30325224,300,300,,,190561034,142350146,136690824,190637972,30325224,SRX17041805,SRS14626477,SRA1474258,Max Planck Institut|Boehm,Max Planck Institut,2,0.11811,9e-05,0.00424,4e-05,0.99472,0.99995,0.43275,0.5,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70872,SRR21025559,SRX17041804,SRS14626476,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF A3,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Ca mutant fish 3|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF A3 37,ZF A3 37,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_A_3_R1.fastq.gz ZF_A_3_R2.fastq.gz,fastq fastq,460708800.0,767848.0,ZF A 3 R1.fastq.gz,0:300 1:300,A:128444122;C:96066218;G:93502400;T:122577077;N:20118983,300,300,,,128444122,96066218,93502400,122577077,20118983,SRX17041804,SRS14626476,SRA1474258,Max Planck Institut|Boehm,Max Planck Institut,2,0.12334,8e-05,0.00785,5e-05,0.99486,0.99997,0.57556,1.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70873,SRR21025560,SRX17041803,SRS14626475,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF A2,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Ca mutant fish 2|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF A2 37,ZF A2 37,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_A_2_R1.fastq.gz ZF_A_2_R2.fastq.gz,fastq fastq,665948400.0,1109914.0,ZF A 2 R1.fastq.gz,0:300 1:300,A:185901193;C:135612243;G:135145305;T:180035490;N:29254169,300,300,,,185901193,135612243,135145305,180035490,29254169,SRX17041803,SRS14626475,SRA1474258,Max Planck Institut|Boehm,Max Planck Institut,2,0.14435,0.0,0.00709,0.0,0.99429,1.0,0.46577,,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70874,SRR21025561,SRX17041802,SRS14626474,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,Ca mutant ZF,ZF A1,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Ca mutant fish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCR Calpha mutant zebrafish repertoire,ZF A1 37,ZF A1 37,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,ZF_A_1_R1.fastq.gz ZF_A_1_R2.fastq.gz,fastq fastq,988403400.0,1647339.0,ZF A 1 R1.fastq.gz,0:300 1:300,A:274811390;C:202503190;G:195476681;T:272202966;N:43409173,300,300,,,274811390,202503190,195476681,272202966,43409173,SRX17041802,SRS14626474,SRA1474258,Max Planck Institut|Boehm,Max Planck Institut,2,0.15605,0.0001,0.0075,6e-05,0.99304,0.99997,0.44452,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-12,Adult,Adult,Trunk,Surface Structure
70875,SRR20823554,SRX16843129,SRS14446944,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 8,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 8|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 8,CF 25 8,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_8i_1_R1.fastq.gz CF_8i_1_R2.fastq.gz CF_8i_2_R1.fastq.gz CF_8i_2_R2.fastq.gz CF_8i_3_R1.fastq.gz CF_8i_3_R2.fastq.gz CF_8i_4_R1.fastq.gz CF_8i_4_R2.fastq.gz CF_8ii_1_R1.fastq.gz CF_8ii_1_R2.fastq.gz CF_8ii_2_R1.fastq.gz CF_8ii_2_R2.fastq.gz CF_8ii_3_R1.fastq.gz CF_8ii_3_R2.fastq.gz CF_8ii_4_R1.fastq.gz CF_8ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,353982600.0,589971.0,CF 8i 1 R1.fastq.gz,0:300 1:300,A:95337236;C:72187591;G:66351347;T:119978210;N:128216,300,300,,,95337236,72187591,66351347,119978210,128216,SRX16843129,SRS14446944,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.15841,0.00021,0.00079,0.00015,0.99961,0.99995,0.44832,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70876,SRR20823555,SRX16843128,SRS14446943,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 7,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 7|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 7,CF 25 7,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_7i_1_R1.fastq.gz CF_7i_1_R2.fastq.gz CF_7i_2_R1.fastq.gz CF_7i_2_R2.fastq.gz CF_7i_3_R1.fastq.gz CF_7i_3_R2.fastq.gz CF_7i_4_R1.fastq.gz CF_7i_4_R2.fastq.gz CF_7ii_1_R1.fastq.gz CF_7ii_1_R2.fastq.gz CF_7ii_2_R1.fastq.gz CF_7ii_2_R2.fastq.gz CF_7ii_3_R1.fastq.gz CF_7ii_3_R2.fastq.gz CF_7ii_4_R1.fastq.gz CF_7ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,1747909200.0,2913182.0,CF 7i 1 R1.fastq.gz,0:300 1:300,A:483225545;C:364529202;G:366375323;T:532231673;N:1547457,300,300,,,483225545,364529202,366375323,532231673,1547457,SRX16843128,SRS14446943,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.11826,4e-05,0.00019,3e-05,0.99939,1.0,0.0663,,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70877,SRR20823556,SRX16843127,SRS14446942,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 6,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 6|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 6,CF 25 6,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_6i_1_R1.fastq.gz CF_6i_1_R2.fastq.gz CF_6i_2_R1.fastq.gz CF_6i_2_R2.fastq.gz CF_6i_3_R1.fastq.gz CF_6i_3_R2.fastq.gz CF_6i_4_R1.fastq.gz CF_6i_4_R2.fastq.gz CF_6ii_1_R1.fastq.gz CF_6ii_1_R2.fastq.gz CF_6ii_2_R1.fastq.gz CF_6ii_2_R2.fastq.gz CF_6ii_3_R1.fastq.gz CF_6ii_3_R2.fastq.gz CF_6ii_4_R1.fastq.gz CF_6ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,2113688400.0,3522814.0,CF 6i 1 R1.fastq.gz,0:300 1:300,A:584272199;C:441403541;G:441691655;T:644543652;N:1777353,300,300,,,584272199,441403541,441691655,644543652,1777353,SRX16843127,SRS14446942,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.11642,4e-05,0.00012,1e-05,0.99955,0.99997,0.05908,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70878,SRR20823557,SRX16843126,SRS14446941,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 5,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 5|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 5,CF 25 5,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_5i_1_R1.fastq.gz CF_5i_1_R2.fastq.gz CF_5i_2_R1.fastq.gz CF_5i_2_R2.fastq.gz CF_5i_3_R1.fastq.gz CF_5i_3_R2.fastq.gz CF_5i_4_R1.fastq.gz CF_5i_4_R2.fastq.gz CF_5ii_1_R1.fastq.gz CF_5ii_1_R2.fastq.gz CF_5ii_2_R1.fastq.gz CF_5ii_2_R2.fastq.gz CF_5ii_3_R1.fastq.gz CF_5ii_3_R2.fastq.gz CF_5ii_4_R1.fastq.gz CF_5ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,1563231600.0,2605386.0,CF 5i 1 R1.fastq.gz,0:300 1:300,A:431285088;C:326876454;G:326380744;T:477247162;N:1442152,300,300,,,431285088,326876454,326380744,477247162,1442152,SRX16843126,SRS14446941,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.11826,4e-05,0.00024,2e-05,0.99928,0.99997,0.20833,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70879,SRR20823558,SRX16843125,SRS14446939,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 4,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 4|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 4,CF 25 4,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_4i_1_R1.fastq.gz CF_4i_1_R2.fastq.gz CF_4i_2_R1.fastq.gz CF_4i_2_R2.fastq.gz CF_4i_3_R1.fastq.gz CF_4i_3_R2.fastq.gz CF_4i_4_R1.fastq.gz CF_4i_4_R2.fastq.gz CF_4ii_1_R1.fastq.gz CF_4ii_1_R2.fastq.gz CF_4ii_2_R1.fastq.gz CF_4ii_2_R2.fastq.gz CF_4ii_3_R1.fastq.gz CF_4ii_3_R2.fastq.gz CF_4ii_4_R1.fastq.gz CF_4ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,2110654800.0,3517758.0,CF 4i 1 R1.fastq.gz,0:300 1:300,A:583907147;C:441977681;G:442168609;T:640843429;N:1757934,300,300,,,583907147,441977681,442168609,640843429,1757934,SRX16843125,SRS14446939,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.09992,3e-05,0.00029,2e-05,0.99922,1.0,0.06198,,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70880,SRR20823559,SRX16843124,SRS14446940,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 3,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 3|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 3,CF 25 3,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_3i_1_R1.fastq.gz CF_3i_1_R2.fastq.gz CF_3i_2_R1.fastq.gz CF_3i_2_R2.fastq.gz CF_3i_3_R1.fastq.gz CF_3i_3_R2.fastq.gz CF_3i_4_R1.fastq.gz CF_3i_4_R2.fastq.gz CF_3ii_1_R1.fastq.gz CF_3ii_1_R2.fastq.gz CF_3ii_2_R1.fastq.gz CF_3ii_2_R2.fastq.gz CF_3ii_3_R1.fastq.gz CF_3ii_3_R2.fastq.gz CF_3ii_4_R1.fastq.gz CF_3ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,1358656200.0,2264427.0,CF 3i 1 R1.fastq.gz,0:300 1:300,A:373530868;C:285820823;G:282903019;T:415201895;N:1199595,300,300,,,373530868,285820823,282903019,415201895,1199595,SRX16843124,SRS14446940,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.13469,7e-05,0.00024,4e-05,0.9992,0.99997,0.09944,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70881,SRR20823560,SRX16843123,SRS14446938,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 2,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 2|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 2,CF 25 2,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_1_2ii_5_R1.fastq.gz CF_1_2ii_5_R2.fastq.gz CF_1_2ii_6_R1.fastq.gz CF_1_2ii_6_R2.fastq.gz CF_1_2ii_7_R1.fastq.gz CF_1_2ii_7_R2.fastq.gz CF_1_2ii_8_R1.fastq.gz CF_1_2ii_8_R2.fastq.gz CF_2i_1_R1.fastq.gz CF_2i_1_R2.fastq.gz CF_2i_2_R1.fastq.gz CF_2i_2_R2.fastq.gz CF_2i_3_R1.fastq.gz CF_2i_3_R2.fastq.gz CF_2i_4_R1.fastq.gz CF_2i_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,1017871200.0,1696452.0,CF 1 2ii 5 R1.fastq.gz,0:300 1:300,A:281361148;C:213220413;G:212347028;T:310111745;N:830866,300,300,,,281361148,213220413,212347028,310111745,830866,SRX16843123,SRS14446938,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.13088,5e-05,0.00029,3e-05,0.99949,0.99997,0.11499,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70882,SRR20823561,SRX16843122,SRS14446937,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 1,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 25 1,CF 25 1,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_1_2ii_1_R1.fastq.gz CF_1_2ii_1_R2.fastq.gz CF_1_2ii_2_R1.fastq.gz CF_1_2ii_2_R2.fastq.gz CF_1_2ii_3_R1.fastq.gz CF_1_2ii_3_R2.fastq.gz CF_1_2ii_4_R1.fastq.gz CF_1_2ii_4_R2.fastq.gz CF_1i_1_R1.fastq.gz CF_1i_1_R2.fastq.gz CF_1i_2_R1.fastq.gz CF_1i_2_R2.fastq.gz CF_1i_3_R1.fastq.gz CF_1i_3_R2.fastq.gz CF_1i_4_R1.fastq.gz CF_1i_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,725888400.0,1209814.0,CF 1 2ii 1 R1.fastq.gz,0:300 1:300,A:200725177;C:151940953;G:151616803;T:220966635;N:638832,300,300,,,200725177,151940953,151616803,220966635,638832,SRX16843122,SRS14446937,SRA1468943,Max Planck Institut|Boehm,Max Planck Institut,2,0.12857,4e-05,0.0002,2e-05,0.99937,0.99995,0.05962,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70883,SRR20822140,SRX16841749,SRS14446944,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 8,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 8|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 8,CF 23 8,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_8i_1_R1.fastq.gz CF_8i_1_R2.fastq.gz CF_8i_2_R1.fastq.gz CF_8i_2_R2.fastq.gz CF_8i_3_R1.fastq.gz CF_8i_3_R2.fastq.gz CF_8i_4_R1.fastq.gz CF_8i_4_R2.fastq.gz CF_8ii_1_R1.fastq.gz CF_8ii_1_R2.fastq.gz CF_8ii_2_R1.fastq.gz CF_8ii_2_R2.fastq.gz CF_8ii_3_R1.fastq.gz CF_8ii_3_R2.fastq.gz CF_8ii_4_R1.fastq.gz CF_8ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,992400.0,1654.0,CF 8i 1 R1.fastq.gz,0:300 1:300,A:268792;C:212596;G:195943;T:315027;N:42,300,300,,,268792,212596,195943,315027,42,SRX16841749,SRS14446944,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.15462,0.04181,0.0,0.03858,0.99995,0.99997,0.62809,0.0,300,300,B,T,mate2 technical by mapping diff,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70884,SRR20822141,SRX16841748,SRS14446943,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 7,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 7|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 7,CF 23 7,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_7i_1_R1.fastq.gz CF_7i_1_R2.fastq.gz CF_7i_2_R1.fastq.gz CF_7i_2_R2.fastq.gz CF_7i_3_R1.fastq.gz CF_7i_3_R2.fastq.gz CF_7i_4_R1.fastq.gz CF_7i_4_R2.fastq.gz CF_7ii_1_R1.fastq.gz CF_7ii_1_R2.fastq.gz CF_7ii_2_R1.fastq.gz CF_7ii_2_R2.fastq.gz CF_7ii_3_R1.fastq.gz CF_7ii_3_R2.fastq.gz CF_7ii_4_R1.fastq.gz CF_7ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,90294000.0,150490.0,CF 7i 1 R1.fastq.gz,0:300 1:300,A:24528989;C:19392684;G:18743775;T:27623730;N:4822,300,300,,,24528989,19392684,18743775,27623730,4822,SRX16841748,SRS14446943,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.07466,2e-05,0.00014,1e-05,0.99979,1.0,0.07443,,300,300,T,T,mates < 9% mapping rate,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70885,SRR20822142,SRX16841747,SRS14446942,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 6,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 6|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 6,CF 23 6,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_6i_1_R1.fastq.gz CF_6i_1_R2.fastq.gz CF_6i_2_R1.fastq.gz CF_6i_2_R2.fastq.gz CF_6i_3_R1.fastq.gz CF_6i_3_R2.fastq.gz CF_6i_4_R1.fastq.gz CF_6i_4_R2.fastq.gz CF_6ii_1_R1.fastq.gz CF_6ii_1_R2.fastq.gz CF_6ii_2_R1.fastq.gz CF_6ii_2_R2.fastq.gz CF_6ii_3_R1.fastq.gz CF_6ii_3_R2.fastq.gz CF_6ii_4_R1.fastq.gz CF_6ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,88349400.0,147249.0,CF 6i 1 R1.fastq.gz,0:300 1:300,A:23979442;C:18990541;G:18286837;T:27088540;N:4040,300,300,,,23979442,18990541,18286837,27088540,4040,SRX16841747,SRS14446942,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.07,1e-05,0.00013,0.0,0.99967,1.0,0.08186,,300,300,T,T,mates < 9% mapping rate,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70886,SRR20822143,SRX16841746,SRS14446941,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 5,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 5|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 5,CF 23 5,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_5i_1_R1.fastq.gz CF_5i_1_R2.fastq.gz CF_5i_2_R1.fastq.gz CF_5i_2_R2.fastq.gz CF_5i_3_R1.fastq.gz CF_5i_3_R2.fastq.gz CF_5i_4_R1.fastq.gz CF_5i_4_R2.fastq.gz CF_5ii_1_R1.fastq.gz CF_5ii_1_R2.fastq.gz CF_5ii_2_R1.fastq.gz CF_5ii_2_R2.fastq.gz CF_5ii_3_R1.fastq.gz CF_5ii_3_R2.fastq.gz CF_5ii_4_R1.fastq.gz CF_5ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,64482600.0,107471.0,CF 5i 1 R1.fastq.gz,0:300 1:300,A:17454099;C:13879333;G:13325003;T:19821371;N:2794,300,300,,,17454099,13879333,13325003,19821371,2794,SRX16841746,SRS14446941,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.06999,4e-05,0.00066,3e-05,0.99971,1.0,0.34418,,300,300,T,T,mates < 9% mapping rate,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70887,SRR20822144,SRX16841745,SRS14446939,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 4,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 4|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 4,CF 23 4,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_4i_1_R1.fastq.gz CF_4i_1_R2.fastq.gz CF_4i_2_R1.fastq.gz CF_4i_2_R2.fastq.gz CF_4i_3_R1.fastq.gz CF_4i_3_R2.fastq.gz CF_4i_4_R1.fastq.gz CF_4i_4_R2.fastq.gz CF_4ii_1_R1.fastq.gz CF_4ii_1_R2.fastq.gz CF_4ii_2_R1.fastq.gz CF_4ii_2_R2.fastq.gz CF_4ii_3_R1.fastq.gz CF_4ii_3_R2.fastq.gz CF_4ii_4_R1.fastq.gz CF_4ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,89868600.0,149781.0,CF 4i 1 R1.fastq.gz,0:300 1:300,A:24387218;C:19355528;G:18593888;T:27527119;N:4847,300,300,,,24387218,19355528,18593888,27527119,4847,SRX16841745,SRS14446939,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.04754,1e-05,0.00033,0.0,0.99939,1.0,0.10674,,300,300,T,T,mates < 9% mapping rate,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70888,SRR20822145,SRX16841744,SRS14446940,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 3,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 3|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 3,CF 23 3,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_3i_1_R1.fastq.gz CF_3i_1_R2.fastq.gz CF_3i_2_R1.fastq.gz CF_3i_2_R2.fastq.gz CF_3i_3_R1.fastq.gz CF_3i_3_R2.fastq.gz CF_3i_4_R1.fastq.gz CF_3i_4_R2.fastq.gz CF_3ii_1_R1.fastq.gz CF_3ii_1_R2.fastq.gz CF_3ii_2_R1.fastq.gz CF_3ii_2_R2.fastq.gz CF_3ii_3_R1.fastq.gz CF_3ii_3_R2.fastq.gz CF_3ii_4_R1.fastq.gz CF_3ii_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,57636000.0,96060.0,CF 3i 1 R1.fastq.gz,0:300 1:300,A:15535821;C:12511228;G:11909225;T:17677153;N:2573,300,300,,,15535821,12511228,11909225,17677153,2573,SRX16841744,SRS14446940,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.08313,3e-05,0.00034,1e-05,0.99979,0.99997,0.14815,0.0,300,300,T,T,mates < 9% mapping rate,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70889,SRR20822146,SRX16841743,SRS14446938,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 2,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 2|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 2,CF 23 2,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_1_2ii_5_R1.fastq.gz CF_1_2ii_5_R2.fastq.gz CF_1_2ii_6_R1.fastq.gz CF_1_2ii_6_R2.fastq.gz CF_1_2ii_7_R1.fastq.gz CF_1_2ii_7_R2.fastq.gz CF_1_2ii_8_R1.fastq.gz CF_1_2ii_8_R2.fastq.gz CF_2i_1_R1.fastq.gz CF_2i_1_R2.fastq.gz CF_2i_2_R1.fastq.gz CF_2i_2_R2.fastq.gz CF_2i_3_R1.fastq.gz CF_2i_3_R2.fastq.gz CF_2i_4_R1.fastq.gz CF_2i_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,45198000.0,75330.0,CF 1 2ii 5 R1.fastq.gz,0:300 1:300,A:12248161;C:9753570;G:9327745;T:13866741;N:1783,300,300,,,12248161,9753570,9327745,13866741,1783,SRX16841743,SRS14446938,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.07225,0.0,0.00046,0.0,0.99981,1.0,0.19253,,300,300,T,T,mates < 9% mapping rate,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure
70890,SRR20822147,SRX16841742,SRS14446937,SRP389887,PRJNA865921,Zebrafish mutant TCR alpha and beta lines,PRJNA865921,Other,Cas9 generated TCR alpha or beta Zebrafish lines,,pubmed:37344590,,,CF 1,,strain:TLEK|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:6 month|dev stage:adult|sex:missing|tissue:whole body|replicate:Zebrafish 1|BioSampleModel:Model organism or animal,,,,,,,,,TCRab zebrafish repertoire,CF 23 1,CF 23 1,Repertoire amplification from cDNA  with C specific primers for TCRa and TCRb,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiSeq,,SRP389887,,,CF_1_2ii_1_R1.fastq.gz CF_1_2ii_1_R2.fastq.gz CF_1_2ii_2_R1.fastq.gz CF_1_2ii_2_R2.fastq.gz CF_1_2ii_3_R1.fastq.gz CF_1_2ii_3_R2.fastq.gz CF_1_2ii_4_R1.fastq.gz CF_1_2ii_4_R2.fastq.gz CF_1i_1_R1.fastq.gz CF_1i_1_R2.fastq.gz CF_1i_2_R1.fastq.gz CF_1i_2_R2.fastq.gz CF_1i_3_R1.fastq.gz CF_1i_3_R2.fastq.gz CF_1i_4_R1.fastq.gz CF_1i_4_R2.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq fastq,33274200.0,55457.0,CF 1 2ii 1 R1.fastq.gz,0:300 1:300,A:9021097;C:7171844;G:6860950;T:10218627;N:1682,300,300,,,9021097,7171844,6860950,10218627,1682,SRX16841742,SRS14446937,SRA1468924,Max Planck Institut|Boehm,Max Planck Institut,2,0.06705,3e-05,0.00012,2e-05,0.99987,1.0,0.11281,,300,300,T,T,mates < 9% mapping rate,illumina,miseq,unknown,random_priming,unknown,bulk,unknown,unknown,,Germany,2022-08-04,Adult,Adult,Trunk,Surface Structure