rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 42968,SRR5892584,SRX3058354,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF DMSO 3,40,40,solvent control for MF treatments replication 3,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-DMSO-3.gz,fastq,125472592.0,1204687.0,MF DMSO 3.gz,0:104.15,A:29674919;C:33269421;G:33090427;T:29437825;N:0,104,,,,29674919,33269421,33090427,29437825,0,SRX3058354,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96782,,0.00028,,0.97096,,0.44758,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42969,SRR5892585,SRX3058353,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF DMSO 2,39,39,solvent control for MF treatments replication 2,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-DMSO-2.gz,fastq,99884913.0,971141.0,MF DMSO 2.gz,0:102.85,A:23598949;C:26322425;G:26544412;T:23419127;N:0,102,,,,23598949,26322425,26544412,23419127,0,SRX3058353,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97296,,0.00027,,0.97092,,0.46658,,95,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42970,SRR5892586,SRX3058352,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchD 2,71,71,embryo post 8 32hpf solvent control exposurereplication 2 in forth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch4-2.gz,fastq,121679118.0,1146532.0,DMSO batchD 2.gz,0:106.13,A:28957172;C:31903260;G:31955173;T:28863513;N:0,106,,,,28957172,31903260,31955173,28863513,0,SRX3058352,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.94833,,0.0003,,0.97019,,0.46856,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42971,SRR5892587,SRX3058351,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchE 1,73,73,embryo post 8 32hpf solvent control exposurereplication 1 in fifth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch5-1.gz,fastq,123397953.0,1167071.0,DMSO batchE 1.gz,0:105.73,A:28979230;C:32683758;G:32531951;T:29203014;N:0,105,,,,28979230,32683758,32531951,29203014,0,SRX3058351,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95859,,0.00022,,0.97072,,0.45965,,53,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42972,SRR5892588,SRX3058350,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF REF2,32,32,embryo post 8 32hpf 2 REF MFexposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-REF2.gz,fastq,118386968.0,1138153.0,MF REF2.gz,0:104.02,A:27897906;C:31473696;G:31180817;T:27834549;N:0,104,,,,27897906,31473696,31180817,27834549,0,SRX3058350,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97077,,0.00031,,0.97078,,0.4628,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42973,SRR5892589,SRX3058349,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF REF10,31,31,embryo post 8 32hpf 10 REF MF exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-REF10.gz,fastq,102454725.0,1000173.0,MF REF10.gz,0:102.44,A:24358570;C:27069059;G:26881004;T:24146092;N:0,102,,,,24358570,27069059,26881004,24146092,0,SRX3058349,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97646,,0.00032,,0.97096,,0.44494,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42974,SRR5892590,SRX3058348,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF REF0.08,34,34,embryo post 8 32hpf 0.08 REF MF exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-REF0.08.gz,fastq,120057844.0,1117682.0,MF REF0.08.gz,0:107.42,A:28224691;C:31792991;G:31542256;T:28497906;N:0,107,,,,28224691,31792991,31542256,28497906,0,SRX3058348,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95452,,0.0002,,0.97114,,0.45435,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42975,SRR5892591,SRX3058347,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF REF0.4,33,33,embryo post 8 32hpf 0.4 REF MF exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-REF0.4.gz,fastq,180105044.0,1745166.0,MF REF0.4.gz,0:103.20,A:42458831;C:47872884;G:47284824;T:42488505;N:0,103,,,,42458831,47872884,47284824,42488505,0,SRX3058347,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97346,,0.0003,,0.97076,,0.4492,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42976,SRR5892592,SRX3058346,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF REF0.0032,36,36,embryo post 8 32hpf 0.0032 REF MF exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-REF0.0032.gz,fastq,118651783.0,1150496.0,MF REF0.0032.gz,0:103.13,A:28100611;C:31226792;G:31323929;T:28000451;N:0,103,,,,28100611,31226792,31323929,28000451,0,SRX3058346,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97372,,0.00029,,0.97076,,0.44374,,209,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42977,SRR5892593,SRX3058345,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF REF0.016,35,35,embryo post 8 32hpf 0.016 REF MF exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-REF0.016.gz,fastq,120264407.0,1144665.0,MF REF0.016.gz,0:105.07,A:28327111;C:31914661;G:31543876;T:28478759;N:0,105,,,,28327111,31914661,31543876,28478759,0,SRX3058345,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96809,,0.00037,,0.97021,,0.476,,95,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42978,SRR5892594,SRX3058344,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF DMSO 1,38,38,solvent control for MF treatments replication 1,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-DMSO-1.gz,fastq,112685903.0,1086206.0,MF DMSO 1.gz,0:103.74,A:26477784;C:30135462;G:29566470;T:26506187;N:0,103,,,,26477784,30135462,29566470,26506187,0,SRX3058344,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96856,,0.00033,,0.97053,,0.47169,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42979,SRR5892595,SRX3058343,SRS2404188,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,MF,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:MF REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,MF REF0.00064,37,37,embryo post 8 32hpf 0.00064 REF MF exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,MF-REF0.00064.gz,fastq,138041498.0,1329985.0,MF REF0.00064.gz,0:103.79,A:32831449;C:36507596;G:36517879;T:32184574;N:0,103,,,,32831449,36507596,36517879,32184574,0,SRX3058343,SRS2404188,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.9711,,0.00032,,0.97037,,0.45908,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42980,SRR5892596,SRX3058342,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA DMSO 3,14,14,solvent control for BPA treatments replication 3,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-DMSO-3.gz,fastq,128677198.0,1267014.0,BPA batchA DMSO 3.gz,0:101.56,A:30121409;C:34158183;G:33947254;T:30450352;N:0,101,,,,30121409,34158183,33947254,30450352,0,SRX3058342,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.9747,,0.00038,,0.96997,,0.45436,,39,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42981,SRR5892597,SRX3058341,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA DMSO 2,13,13,solvent control for BPA treatments replication 2,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-DMSO-2.gz,fastq,139753534.0,1344733.0,BPA batchA DMSO 2.gz,0:103.93,A:32634342;C:37124460;G:36974717;T:33020015;N:0,103,,,,32634342,37124460,36974717,33020015,0,SRX3058341,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96389,,0.0003,,0.97061,,0.4625,,130,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42982,SRR5892598,SRX3058340,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA DMSO 1,12,12,solvent control for BPA treatments replication 1,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-DMSO-1.gz,fastq,87146396.0,838028.0,BPA batchA DMSO 1.gz,0:103.99,A:20425737;C:23194839;G:22979017;T:20546803;N:0,103,,,,20425737,23194839,22979017,20546803,0,SRX3058340,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96674,,0.00031,,0.97023,,0.45374,,293,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42983,SRR5892599,SRX3058339,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 0.00001米收,11,11,embryo post 8 32hpf 0.00001米收 BPA exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-0.00001.gz,fastq,181136622.0,1697148.0,BPA batchA 0.00001.gz,0:106.73,A:42674421;C:48091657;G:47628809;T:42741735;N:0,106,,,,42674421,48091657,47628809,42741735,0,SRX3058339,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.94555,,0.00034,,0.96995,,0.46606,,127,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42984,SRR5892600,SRX3058338,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchB DMSO 1,18,18,solvent control for BPA treatments replication 1 of second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch2-DMSO-1.gz,fastq,190360408.0,1826565.0,BPA batchB DMSO 1.gz,0:104.22,A:45053834;C:50530050;G:49994950;T:44781574;N:0,104,,,,45053834,50530050,49994950,44781574,0,SRX3058338,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95851,,0.0005,,0.97064,,0.48533,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42985,SRR5892601,SRX3058337,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchB 10米收 3,17,17,embryo post 8 32hpf 10米收 BPA exposure replication 3 of second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch2-10-3.gz,fastq,129958171.0,1234884.0,BPA batchB 10 3.gz,0:105.24,A:30593687;C:34649249;G:33959196;T:30756039;N:0,105,,,,30593687,34649249,33959196,30756039,0,SRX3058337,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95837,,0.00038,,0.97021,,0.43259,,90,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42986,SRR5892602,SRX3058336,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchB 10米收 2,16,16,embryo post 8 32hpf 10米收 BPA exposure replication 2 of second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch2-10-2.gz,fastq,111526287.0,1065508.0,BPA batchB 10 2.gz,,,,,,,,,,,,SRX3058336,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95874,,0.00036,,0.97088,,0.47485,,91,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42987,SRR5892603,SRX3058335,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchB 10米收 1,15,15,embryo post 8 32hpf 10米收 BPA exposure replication 1 of second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch2-10-1.gz,fastq,148236004.0,1405950.0,BPA batchB 10 1.gz,0:105.43,A:34932381;C:39440691;G:38952209;T:34910723;N:0,105,,,,34932381,39440691,38952209,34910723,0,SRX3058335,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.94847,,0.00039,,0.97104,,0.44543,,147,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42988,SRR5892604,SRX3058334,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW DMSO 1,58,58,solvent control for RW treatments replication 1,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-DMSO-1.gz,fastq,90296522.0,881436.0,RW DMSO 1.gz,0:102.44,A:21245787;C:24001505;G:23627578;T:21421652;N:0,102,,,,21245787,24001505,23627578,21421652,0,SRX3058334,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97259,,0.00038,,0.97059,,0.46653,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42989,SRR5892605,SRX3058333,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW REF0.00064,57,57,embryo post 8 32hpf 0.00064 REF RW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-REF0.00064.gz,fastq,119148594.0,1136559.0,RW REF0.00064.gz,0:104.83,A:28408032;C:31308813;G:31437438;T:27994311;N:0,104,,,,28408032,31308813,31437438,27994311,0,SRX3058333,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96623,,0.00038,,0.97041,,0.46244,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42990,SRR5892606,SRX3058332,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchB DMSO 3,20,20,solvent control for BPA treatments replication 3 of second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch2-DMSO-3.gz,fastq,132185040.0,1292999.0,BPA batchB DMSO 3.gz,0:102.23,A:31141243;C:35151786;G:34801554;T:31090457;N:0,102,,,,31141243,35151786,34801554,31090457,0,SRX3058332,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96648,,0.00044,,0.9712,,0.46006,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42991,SRR5892607,SRX3058331,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchB DMSO 2,19,19,solvent control for BPA treatments replication 2 of second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch2-DMSO-2.gz,fastq,198715047.0,1945773.0,BPA batchB DMSO 2.gz,0:102.13,A:46860862;C:52753060;G:52418957;T:46682168;N:0,102,,,,46860862,52753060,52418957,46682168,0,SRX3058331,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96434,,0.00054,,0.97102,,0.48108,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42992,SRR5892608,SRX3058330,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW REF0.08,54,54,embryo post 8 32hpf 0.08 REF RW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-REF0.08.gz,fastq,127136654.0,1214911.0,RW REF0.08.gz,0:104.65,A:30233425;C:33478062;G:33472258;T:29952909;N:0,104,,,,30233425,33478062,33472258,29952909,0,SRX3058330,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96691,,0.0003,,0.97055,,0.46819,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42993,SRR5892609,SRX3058329,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW REF0.4,53,53,embryo post 8 32hpf 0.4 REF RW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-REF0.4.gz,fastq,129289322.0,1244319.0,RW REF0.4.gz,0:103.90,A:30777918;C:34167997;G:33984655;T:30358752;N:0,103,,,,30777918,34167997,33984655,30358752,0,SRX3058329,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97109,,0.00047,,0.97068,,0.45379,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42994,SRR5892610,SRX3058328,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW REF2,52,52,embryo post 8 32hpf 2 REF RW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-REF2.gz,fastq,135626205.0,1336064.0,RW REF2.gz,0:101.51,A:31940807;C:35945322;G:35661876;T:32078200;N:0,101,,,,31940807,35945322,35661876,32078200,0,SRX3058328,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97398,,0.00037,,0.971,,0.44795,,101,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42995,SRR5892611,SRX3058327,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW REF10,51,51,embryo post 8 32hpf 10 REF RW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-REF10.gz,fastq,114472762.0,1101957.0,RW REF10.gz,0:103.88,A:27165344;C:30313463;G:29951959;T:27041996;N:0,103,,,,27165344,30313463,29951959,27041996,0,SRX3058327,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96908,,0.0003,,0.9709,,0.47528,,94,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42996,SRR5892612,SRX3058326,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW REF0.0032,56,56,embryo post 8 32hpf 0.0032 REF RW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-REF0.0032.gz,fastq,132020159.0,1278212.0,RW REF0.0032.gz,0:103.29,A:31188115;C:34954540;G:34762155;T:31115349;N:0,103,,,,31188115,34954540,34762155,31115349,0,SRX3058326,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96987,,0.00023,,0.97128,,0.4595,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42997,SRR5892613,SRX3058325,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchE 3,75,75,embryo post 8 32hpf solvent control exposurereplication 3 in fifth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch5-3.gz,fastq,134422048.0,1283130.0,DMSO batchE 3.gz,0:104.76,A:32023899;C:35569650;G:34994035;T:31834464;N:0,104,,,,32023899,35569650,34994035,31834464,0,SRX3058325,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96792,,0.00025,,0.97023,,0.47309,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42998,SRR5892614,SRX3058324,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW REF0.016,55,55,embryo post 8 32hpf 0.016 REF RW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-REF0.016.gz,fastq,89401238.0,882005.0,RW REF0.016.gz,0:101.36,A:21088292;C:23716541;G:23507120;T:21089285;N:0,101,,,,21088292,23716541,23507120,21089285,0,SRX3058324,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97867,,0.00029,,0.97149,,0.45787,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 42999,SRR5892615,SRX3058323,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 10米收 2,2,2,embryo post 8 32hpf 10米收 BPA exposure replication 2,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-10-2.gz,fastq,80529137.0,762390.0,BPA batchA 10 2.gz,0:105.63,A:18846226;C:21468380;G:21127663;T:19086868;N:0,105,,,,18846226,21468380,21127663,19086868,0,SRX3058323,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96077,,0.00029,,0.97017,,0.46214,,127,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43000,SRR5892811,SRX3058322,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 10米收 1,1,1,embryo post 8 32hpf 10米收 BPA exposure replication 1,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-10-1.gz,fastq,73829118.0,703769.0,BPA batchA 10 1,0:104.91,A:17327831;C:19655363;G:19439000;T:17406924;N:0,104,,,,17327831,19655363,19439000,17406924,0,SRX3058322,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95952,,0.00034,,0.97005,,0.44908,,107,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43001,SRR5892616,SRX3058321,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 1米收,4,4,embryo post 8 32hpf 1米收 BPA exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-1.gz,fastq,78363051.0,736886.0,BPA batchA 1.gz,0:106.34,A:18388411;C:20802214;G:20646949;T:18525477;N:0,106,,,,18388411,20802214,20646949,18525477,0,SRX3058321,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95116,,0.00033,,0.9707,,0.4582,,62,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43002,SRR5892617,SRX3058320,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 10米收 3,3,3,embryo post 8 32hpf 10米收 BPA exposure replication 3,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-10-3.gz,fastq,80165508.0,756264.0,BPA batchA 10 3.gz,0:106.00,A:18721565;C:21425571;G:21071998;T:18946374;N:0,106,,,,18721565,21425571,21071998,18946374,0,SRX3058320,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95754,,0.0004,,0.97011,,0.43712,,84,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43003,SRR5892618,SRX3058319,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 0.1米收 2,6,6,embryo post 8 32hpf 0.1米收 BPA exposure replication 2,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-0.1-2.gz,fastq,179856447.0,1717239.0,BPA batchA 0.1 2.gz,0:104.74,A:42432781;C:47571274;G:47195620;T:42656772;N:0,104,,,,42432781,47571274,47195620,42656772,0,SRX3058319,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95824,,0.00044,,0.97053,,0.49329,,180,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43004,SRR5892619,SRX3058318,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 0.1米收 1,5,5,embryo post 8 32hpf 0.1米收 BPA exposure replication 1,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-0.1-1.gz,fastq,61360908.0,585502.0,BPA batchA 0.1 1.gz,0:104.80,A:14340320;C:16321670;G:16194989;T:14503929;N:0,104,,,,14340320,16321670,16194989,14503929,0,SRX3058318,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96519,,0.0002,,0.97074,,0.48732,,45,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43005,SRR5892620,SRX3058317,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 0.01米收,8,8,embryo post 8 32hpf 0.01米收 BPA exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-0.01.gz,fastq,65748354.0,627138.0,BPA batchA 0.01.gz,0:104.84,A:15364594;C:17538856;G:17342236;T:15502668;N:0,104,,,,15364594,17538856,17342236,15502668,0,SRX3058317,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.9598,,0.00022,,0.97112,,0.44717,,138,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43006,SRR5892621,SRX3058316,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 0.1米收 3,7,7,embryo post 8 32hpf 0.1米收 BPA exposure replication 3,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-0.1-3.gz,fastq,266147560.0,2552789.0,BPA batchA 0.1 3.gz,0:104.26,A:62870702;C:70586109;G:69904862;T:62785887;N:0,104,,,,62870702,70586109,69904862,62785887,0,SRX3058316,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96039,,0.00038,,0.97096,,0.45805,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43007,SRR5892622,SRX3058315,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchC 3,69,69,embryo post 8 32hpf solvent control exposurereplication 3 in third batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch3-3.gz,fastq,229568543.0,2215642.0,DMSO batchC 3.gz,0:103.61,A:54491696;C:60494539;G:60307399;T:54274909;N:0,103,,,,54491696,60494539,60307399,54274909,0,SRX3058315,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96381,,0.00039,,0.96909,,0.46232,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43008,SRR5892623,SRX3058314,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 0.001米收,9,9,embryo post 8 32hpf 0.001米收 BPA exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-0.001.gz,fastq,107342639.0,1011191.0,BPA batchA 0.001.gz,0:106.15,A:25243607;C:28560404;G:28259900;T:25278728;N:0,106,,,,25243607,28560404,28259900,25278728,0,SRX3058314,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95157,,0.00018,,0.97015,,0.47508,,97,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43009,SRR5892624,SRX3058313,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchF 1,76,76,embryo post 8 32hpf solvent control exposurereplication 1 in sixth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch6-1.gz,fastq,122524364.0,1140373.0,DMSO batchF 1.gz,0:107.44,A:29037400;C:32463628;G:32002009;T:29021327;N:0,107,,,,29037400,32463628,32002009,29021327,0,SRX3058313,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.93726,,0.00028,,0.96958,,0.45888,,94,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43010,SRR5892625,SRX3058312,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchD 1,70,70,embryo post 8 32hpf solvent control exposurereplication 1 in forth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch4-1.gz,fastq,74926719.0,693447.0,DMSO batchD 1.gz,0:108.05,A:17822945;C:19685470;G:19609716;T:17808588;N:0,108,,,,17822945,19685470,19609716,17808588,0,SRX3058312,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.93205,,0.00032,,0.97027,,0.46463,,90,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43011,SRR5892626,SRX3058311,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 DMSO 2,29,29,solvent control for Eff2 treatments replication 2,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-DMSO-2.gz,fastq,130173677.0,1276939.0,Eff2 DMSO 2.gz,0:101.94,A:30800656;C:34461237;G:34302175;T:30609609;N:0,101,,,,30800656,34461237,34302175,30609609,0,SRX3058311,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97312,,0.00044,,0.97102,,0.46785,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43012,SRR5892627,SRX3058310,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 DMSO 3,30,30,solvent control for Eff2 treatments replication 3,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-DMSO-3.gz,fastq,98823789.0,964906.0,Eff2 DMSO 3.gz,0:102.42,A:23307320;C:26100823;G:25991325;T:23424321;N:0,102,,,,23307320,26100823,25991325,23424321,0,SRX3058310,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97592,,0.00057,,0.96976,,0.47719,,219,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43013,SRR5892628,SRX3058309,SRS2404190,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,BPA,,breed:TU|isolation source:lab|collection date:2017 01 13|geo loc name:China|tissue:embryos|age:32hpf|identified by:BPA 10 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,BPA batchA 0.0001米收,10,10,embryo post 8 32hpf 0.0001米收 BPA exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,BPA-batch1-0.0001.gz,fastq,268069933.0,2570083.0,BPA batchA 0.0001.gz,0:104.30,A:62964064;C:71208232;G:70632425;T:63265212;N:0,104,,,,62964064,71208232,70632425,63265212,0,SRX3058309,SRS2404190,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95821,,0.00028,,0.97019,,0.45389,,55,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43014,SRR5892629,SRX3058308,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 REF0.4,23,23,embryo post 8 32hpf 0.4 REF Eff2 exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-REF0.4.gz,fastq,116602334.0,1111951.0,Eff2 REF0.4.gz,0:104.86,A:27578342;C:31122143;G:30463869;T:27437980;N:0,104,,,,27578342,31122143,30463869,27437980,0,SRX3058308,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96298,,0.00032,,0.97086,,0.47066,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43015,SRR5892630,SRX3058307,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 REF0.08,24,24,embryo post 8 32hpf 0.08 REF Eff2 exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-REF0.08.gz,fastq,117257335.0,1135362.0,Eff2 REF0.08.gz,0:103.28,A:27762486;C:30779147;G:30926101;T:27789601;N:0,103,,,,27762486,30779147,30926101,27789601,0,SRX3058307,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96727,,0.0003,,0.97015,,0.46445,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43016,SRR5892631,SRX3058306,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 REF10,21,21,embryo post 8 32hpf 10 REF Eff2 exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-REF10.gz,fastq,115465293.0,1111343.0,Eff2 REF10.gz,0:103.90,A:27473288;C:30244659;G:30506693;T:27240653;N:0,103,,,,27473288,30244659,30506693,27240653,0,SRX3058306,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96992,,0.00039,,0.97051,,0.47976,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43017,SRR5892632,SRX3058305,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 REF2,22,22,embryo post 8 32hpf 2 REF Eff2 exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-REF2.gz,fastq,120868058.0,1162567.0,Eff2 REF2.gz,0:103.97,A:28696636;C:32093659;G:31820629;T:28257134;N:0,103,,,,28696636,32093659,31820629,28257134,0,SRX3058305,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97014,,0.00042,,0.97094,,0.47389,,182,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43018,SRR5892633,SRX3058304,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 REF0.00064,27,27,embryo post 8 32hpf 0.00064 REF Eff2 exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-REF0.00064.gz,fastq,139928274.0,1343610.0,Eff2 REF0.00064.gz,0:104.14,A:32900996;C:37559352;G:36386686;T:33081240;N:0,104,,,,32900996,37559352,36386686,33081240,0,SRX3058304,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96704,,0.00034,,0.97068,,0.46896,,90,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43019,SRR5892634,SRX3058303,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 DMSO 1,28,28,solvent control for Eff2 treatments replication 1,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-DMSO-1.gz,fastq,60761073.0,595809.0,Eff2 DMSO 1.gz,0:101.98,A:14285866;C:16118046;G:15995502;T:14361659;N:0,101,,,,14285866,16118046,15995502,14361659,0,SRX3058303,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.9804,,0.00049,,0.97053,,0.45304,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43020,SRR5892635,SRX3058302,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 REF0.016,25,25,embryo post 8 32hpf 0.016 REF Eff2 exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-REF0.016.gz,fastq,150218876.0,1519616.0,Eff2 REF0.016.gz,0:98.85,A:35329654;C:39989538;G:39635993;T:35263691;N:0,98,,,,35329654,39989538,39635993,35263691,0,SRX3058302,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.978,,0.00073,,0.97116,,0.45246,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43021,SRR5892636,SRX3058301,SRS2404192,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,Eff2,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:Eff2 REF DMSO 2|BioSampleModel:Invertebrate,,,,,,,,,Eff2 REF0.0032,26,26,embryo post 8 32hpf 0.0032 REF Eff2 exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,Eff2-REF0.0032.gz,fastq,76364045.0,783876.0,Eff2 REF0.0032.gz,0:97.42,A:17887126;C:20254122;G:20251726;T:17971071;N:0,97,,,,17887126,20254122,20251726,17971071,0,SRX3058301,SRS2404192,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.98075,,0.00035,,0.97153,,0.42567,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43022,SRR5892637,SRX3058300,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW DMSO 2,49,49,solvent control for DW treatments replication 2,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-DMSO-2.gz,fastq,98823789.0,964906.0,DW DMSO 2.gz,0:102.42,A:23307320;C:26100823;G:25991325;T:23424321;N:0,102,,,,23307320,26100823,25991325,23424321,0,SRX3058300,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97592,,0.00058,,0.96974,,0.47715,,219,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43023,SRR5892638,SRX3058299,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW DMSO 3,50,50,solvent control for DW treatments replication 3,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-DMSO-3.gz,fastq,98229102.0,950445.0,DW DMSO 3.gz,0:103.35,A:23324283;C:25872498;G:25849563;T:23182758;N:0,103,,,,23324283,25872498,25849563,23182758,0,SRX3058299,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.969,,0.00029,,0.97019,,0.46904,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43024,SRR5892639,SRX3058298,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchB 2,65,65,embryo post 8 32hpf solvent control exposurereplication 2 in second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch2-2.gz,fastq,181332852.0,1769396.0,DMSO batchB 2.gz,0:102.48,A:43111149;C:47723124;G:47703716;T:42794863;N:0,102,,,,43111149,47723124,47703716,42794863,0,SRX3058298,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96034,,0.00047,,0.96974,,0.45533,,196,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43025,SRR5892640,SRX3058297,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchB 3,66,66,embryo post 8 32hpf solvent control exposurereplication 3 in second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch2-3.gz,fastq,250009982.0,2396988.0,DMSO batchB 3.gz,0:104.30,A:59211578;C:66112203;G:65641188;T:59045013;N:0,104,,,,59211578,66112203,65641188,59045013,0,SRX3058297,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95818,,0.00057,,0.96881,,0.45554,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43026,SRR5892641,SRX3058296,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchA 3,63,63,embryo post 8 32hpf solvent control exposurereplication 3 in first batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch1-3.gz,fastq,51761082.0,487084.0,DMSO batchA 3.gz,0:106.27,A:12262267;C:13621715;G:13587764;T:12289336;N:0,106,,,,12262267,13621715,13587764,12289336,0,SRX3058296,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95092,,0.0003,,0.97017,,0.46558,,100,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43027,SRR5892642,SRX3058295,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchB 1,64,64,embryo post 8 32hpf solvent control exposurereplication 1 in second batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch2-1.gz,fastq,137529705.0,1318658.0,DMSO batchB 1.gz,0:104.30,A:32525823;C:36223433;G:36304519;T:32475930;N:0,104,,,,32525823,36223433,36304519,32475930,0,SRX3058295,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95767,,0.00051,,0.96978,,0.45671,,107,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43028,SRR5892643,SRX3058294,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchA 1,61,61,embryo post 8 32hpf solvent control exposurereplication 1 in first batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch1-1.gz,fastq,54970926.0,518074.0,DMSO batchA 1.gz,0:106.11,A:13057581;C:14507897;G:14456016;T:12949432;N:0,106,,,,13057581,14507897,14456016,12949432,0,SRX3058294,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.94528,,0.00049,,0.96932,,0.46753,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43029,SRR5892644,SRX3058293,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchA 2,62,62,embryo post 8 32hpf solvent control exposurereplication 2 in first batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch1-2.gz,fastq,255347833.0,2401083.0,DMSO batchA 2.gz,0:106.35,A:61082865;C:67174427;G:66429786;T:60660755;N:0,106,,,,61082865,67174427,66429786,60660755,0,SRX3058293,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.93642,,0.0006,,0.96907,,0.4557,,100,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43030,SRR5892645,SRX3058292,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW REF10,41,41,embryo post 8 32hpf 10 REF DW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-REF10.gz,fastq,85962034.0,853378.0,DW REF10.gz,0:100.73,A:20224728;C:22751213;G:22796892;T:20189201;N:0,100,,,,20224728,22751213,22796892,20189201,0,SRX3058292,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97882,,0.00028,,0.97139,,0.45221,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43031,SRR5892646,SRX3058291,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW REF2,42,42,embryo post 8 32hpf 2 REF DW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-REF2.gz,fastq,123528031.0,1205821.0,DW REF2.gz,0:102.44,A:29195124;C:32436853;G:32741612;T:29154442;N:0,102,,,,29195124,32436853,32741612,29154442,0,SRX3058291,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97597,,0.00026,,0.97122,,0.42951,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43032,SRR5892647,SRX3058290,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW REF0.4,43,43,embryo post 8 32hpf 0.4 REF DW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-REF0.4.gz,fastq,80805211.0,808689.0,DW REF0.4.gz,0:99.92,A:19124436;C:21362077;G:21221521;T:19097177;N:0,99,,,,19124436,21362077,21221521,19097177,0,SRX3058290,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.98077,,0.00032,,0.97155,,0.45004,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43033,SRR5892648,SRX3058289,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW REF0.08,44,44,embryo post 8 32hpf 0.08 REF DW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-REF0.08.gz,fastq,156227049.0,1483136.0,DW REF0.08.gz,0:105.34,A:37000695;C:41020030;G:41437003;T:36769321;N:0,105,,,,37000695,41020030,41437003,36769321,0,SRX3058289,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96659,,0.00039,,0.97021,,0.46998,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43034,SRR5892649,SRX3058288,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW REF0.016,45,45,embryo post 8 32hpf 0.016 REF DW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-REF0.016.gz,fastq,105525902.0,1024760.0,DW REF0.016.gz,0:102.98,A:25009705;C:27915527;G:27638170;T:24962500;N:0,102,,,,25009705,27915527,27638170,24962500,0,SRX3058288,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96884,,0.00033,,0.97064,,0.44689,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43035,SRR5892650,SRX3058287,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW REF0.0032,46,46,embryo post 8 32hpf 0.0032 REF DW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-REF0.0032.gz,fastq,91320121.0,896375.0,DW REF0.0032.gz,0:101.88,A:21749749;C:24046891;G:24076896;T:21446585;N:0,101,,,,21749749,24046891,24076896,21446585,0,SRX3058287,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97536,,0.00041,,0.97055,,0.45883,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43036,SRR5892651,SRX3058286,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW REF0.00064,47,47,embryo post 8 32hpf 0.00064 REF DW exposure,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-REF0.00064.gz,fastq,79860974.0,769951.0,DW REF0.00064.gz,0:103.72,A:18763494;C:21304233;G:20873577;T:18919670;N:0,103,,,,18763494,21304233,20873577,18919670,0,SRX3058286,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97247,,0.00027,,0.97061,,0.47429,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43037,SRR5892652,SRX3058285,SRS2404193,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:DW REF DMSO 3|BioSampleModel:Invertebrate,,,,,,,,,DW DMSO 1,48,48,solvent control for DW treatments replication 1,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DW-DMSO-1.gz,fastq,111066881.0,1069114.0,DW DMSO 1.gz,0:103.89,A:26048176;C:29494944;G:29306560;T:26217201;N:0,103,,,,26048176,29494944,29306560,26217201,0,SRX3058285,SRS2404193,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.9685,,0.00024,,0.97023,,0.45888,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43038,SRR5892653,SRX3058284,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW DMSO 3,60,60,solvent control for RW treatments replication 3,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-DMSO-3.gz,fastq,79645000.0,756954.0,RW DMSO 3.gz,0:105.22,A:18824017;C:21139617;G:20908469;T:18772897;N:0,105,,,,18824017,21139617,20908469,18772897,0,SRX3058284,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96764,,0.00028,,0.9708,,0.46913,,31,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43039,SRR5892654,SRX3058283,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchC 1,67,67,embryo post 8 32hpf solvent control exposurereplication 1 in third batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch3-1.gz,fastq,148237805.0,1464542.0,DMSO batchC 1.gz,0:101.22,A:34729919;C:39397602;G:39251519;T:34858765;N:0,101,,,,34729919,39397602,39251519,34858765,0,SRX3058283,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97193,,0.00055,,0.97084,,0.44877,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43040,SRR5892655,SRX3058282,SRS2404191,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,RW,,breed:TU|isolation source:lab|collection date:2017 01 27|geo loc name:China|tissue:embryos|age:32hpf|identified by:RW REF10|BioSampleModel:Invertebrate,,,,,,,,,RW DMSO 2,59,59,solvent control for RW treatments replication 2,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,RW-DMSO-2.gz,fastq,88506918.0,858326.0,RW DMSO 2.gz,0:103.12,A:20894323;C:23386921;G:23376653;T:20849021;N:0,103,,,,20894323,23386921,23376653,20849021,0,SRX3058282,SRS2404191,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97107,,0.00042,,0.97017,,0.45197,,82,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43041,SRR5892656,SRX3058281,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchC 2,68,68,embryo post 8 32hpf solvent control exposurereplication 2 in third batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch3-2.gz,fastq,120223045.0,1183014.0,DMSO batchC 2.gz,0:101.62,A:28439501;C:31776286;G:31624483;T:28382775;N:0,101,,,,28439501,31776286,31624483,28382775,0,SRX3058281,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.97113,,0.00052,,0.96842,,0.44542,,77,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43042,SRR5892657,SRX3058280,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchE 2,74,74,embryo post 8 32hpf solvent control exposurereplication 2 in fifth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch5-2.gz,fastq,216569450.0,2036565.0,DMSO batchE 2.gz,0:106.34,A:51035409;C:56995676;G:56813634;T:51724731;N:0,106,,,,51035409,56995676,56813634,51724731,0,SRX3058280,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.94948,,0.0003,,0.96796,,0.45419,,90,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43043,SRR5892658,SRX3058279,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchF 2,77,77,embryo post 8 32hpf solvent control exposurereplication 2 in sixth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch6-2.gz,fastq,60571052.0,576600.0,DMSO batchF 2.gz,0:105.05,A:14291716;C:16022096;G:15996802;T:14260438;N:0,105,,,,14291716,16022096,15996802,14260438,0,SRX3058279,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96382,,0.00025,,0.97066,,0.47343,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43044,SRR5892659,SRX3058278,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchF 3,78,78,embryo post 8 32hpf solvent control exposurereplication 3 in sixth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch6-3.gz,fastq,62914420.0,598585.0,DMSO batchF 3.gz,0:105.11,A:14828390;C:16725889;G:16466687;T:14893454;N:0,105,,,,14828390,16725889,16466687,14893454,0,SRX3058278,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96741,,0.00059,,0.96688,,0.46367,,89,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 43045,SRR5892660,SRX3058277,SRS2404189,SRP114766,PRJNA396480,Danio rerio Raw sequence reads,PRJNA396480,Other,A Reduced Zebrafish Transcriptome Method to Assess Environmental Toxicants Using Embryo Test,,,,,DMSO,,breed:TU|isolation source:lab|collection date:2016 11 07|geo loc name:China|tissue:embryos|age:32hpf|identified by:DMSO 1 batchA|BioSampleModel:Invertebrate,,,,,,,,,DMSO batchD 3,72,72,embryo post 8 32hpf solvent control exposurereplication 3 in forth batch,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP114766,,,DMSO-batch4-3.gz,fastq,108350894.0,993395.0,DMSO batchD 3.gz,0:109.07,A:25455150;C:28656068;G:28399753;T:25839923;N:0,109,,,,25455150,28656068,28399753,25839923,0,SRX3058277,SRS2404189,SRA595054,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.93055,,0.00029,,0.97041,,0.44294,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2017-08-03,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 48726,SRR7789580,SRX4644423,SRS3742493,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 12hpf 3 S18,,strain:5D|isolate:108|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 12hpf 3 S18,TDCIPP 12hpf 3 S18,TDCIPP 12hpf 3 S18,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-12hpf-3_S18_L001_R2_001.fastq.gz TDCIPP-12hpf-3_S18_L001_R1_001.fastq.gz,fastq fastq,103340472.0,472844.0,TDCIPP 12hpf 3 S18 L001 R1 001.fastq.gz,0:109.23 1:109.32,A:26737838;C:24795090;G:24934613;T:26529096;N:343835,109,109,,,26737838,24795090,24934613,26529096,343835,SRX4644423,SRS3742493,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95154,0.95221,0.00019,0.00019,0.99922,0.99924,0.41074,0.41244,121,121,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48727,SRR7789581,SRX4644422,SRS3742492,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 12hpf 2 S17,,strain:5D|isolate:107|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 12hpf 2 S17,TDCIPP 12hpf 2 S17,TDCIPP 12hpf 2 S17,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-12hpf-2_S17_L001_R1_001.fastq.gz TDCIPP-12hpf-2_S17_L001_R2_001.fastq.gz,fastq fastq,127382315.0,575073.0,TDCIPP 12hpf 2 S17 L001 R1 001.fastq.gz,0:110.70 1:110.81,A:32604644;C:30882861;G:31076792;T:32385804;N:432214,110,110,,,32604644,30882861,31076792,32385804,432214,SRX4644422,SRS3742492,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.94383,0.94386,0.00021,0.00022,0.99926,0.99926,0.41023,0.38711,151,151,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48728,SRR7789582,SRX4644421,SRS3742490,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 12hpf 1 S16,,strain:5D|isolate:106|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 12hpf 1 S16,TDCIPP 12hpf 1 S16,TDCIPP 12hpf 1 S16,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-12hpf-1_S16_L001_R1_001.fastq.gz TDCIPP-12hpf-1_S16_L001_R2_001.fastq.gz,fastq fastq,106771425.0,482515.0,TDCIPP 12hpf 1 S16 L001 R1 001.fastq.gz,0:110.59 1:110.69,A:27853264;C:25384933;G:25518809;T:27629968;N:384451,110,110,,,27853264,25384933,25518809,27629968,384451,SRX4644421,SRS3742490,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95913,0.95873,0.00021,0.00025,0.99928,0.99928,0.4122,0.39928,79,79,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48729,SRR7789583,SRX4644420,SRS3742491,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 12hpf 3 S9x,,strain:5D|isolate:105|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 12hpf 3 S9x,DMSO 12hpf 3 S9x,DMSO 12hpf 3 S9x,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-12hpf-3_S9x_L001_R2_001.fastq.gz DMSO-12hpf-3_S9x_L001_R1_001.fastq.gz,fastq fastq,106526213.0,483892.0,DMSO 12hpf 3 S9x L001 R2 001.fastq.gz,0:110.00 1:110.14,A:27523846;C:25609135;G:25786277;T:27228622;N:378333,110,110,,,27523846,25609135,25786277,27228622,378333,SRX4644420,SRS3742491,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95736,0.95668,0.00013,0.00011,0.99924,0.99926,0.45348,0.45617,77,77,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48730,SRR7789584,SRX4644419,SRS3742489,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 12hpf 2 S8,,strain:5D|isolate:104|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 12hpf 2 S8,DMSO 12hpf 2 S8,DMSO 12hpf 2 S8,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-12hpf-2_S8_L001_R1_001.fastq.gz DMSO-12hpf-2_S8_L001_R2_001.fastq.gz,fastq fastq,126754105.0,599652.0,DMSO 12hpf 2 S8 L001 R1 001.fastq.gz,0:105.62 1:105.76,A:32875248;C:30352965;G:30543115;T:32575671;N:407106,105,105,,,32875248,30352965,30543115,32575671,407106,SRX4644419,SRS3742489,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.9631,0.96229,0.00019,0.00019,0.99928,0.99928,0.45939,0.44598,92,92,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48731,SRR7789585,SRX4644418,SRS3742488,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 12hpf 1 S7,,strain:5D|isolate:103|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 12hpf 1 S7,DMSO 12hpf 1 S7,DMSO 12hpf 1 S7,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-12hpf-1_S7_L001_R2_001.fastq.gz DMSO-12hpf-1_S7_L001_R1_001.fastq.gz,fastq fastq,133973234.0,626692.0,DMSO 12hpf 1 S7 L001 R1 001.fastq.gz,0:106.86 1:106.92,A:34741794;C:32048895;G:32233963;T:34368689;N:579893,106,106,,,34741794,32048895,32233963,34368689,579893,SRX4644418,SRS3742488,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.961,0.9606,0.0002,0.00021,0.99928,0.99928,0.47357,0.45763,74,74,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48732,SRR7789586,SRX4644417,SRS3742487,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 6hpf 5 S15,,strain:5D|isolate:102|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 6hpf 5 S15,TDCIPP 6hpf 5 S15,TDCIPP 6hpf 5 S15,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-6hpf-5_S15_L001_R1_001.fastq.gz TDCIPP-6hpf-5_S15_L001_R2_001.fastq.gz,fastq fastq,103436592.0,515633.0,TDCIPP 6hpf 5 S15 L001 R2 001.fastq.gz,0:100.23 1:100.37,A:26213221;C:25393681;G:25395332;T:25877353;N:557005,100,100,,,26213221,25393681,25395332,25877353,557005,SRX4644417,SRS3742487,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.9545,0.9544,0.00043,0.0004,0.99898,0.99904,0.33908,0.3596,64,151,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48733,SRR7789587,SRX4644416,SRS3742486,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 6hpf 3 S14,,strain:5D|isolate:101|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 6hpf 3 S14,TDCIPP 6hpf 3 S14,TDCIPP 6hpf 3 S14,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-6hpf-3_S14_L001_R1_001.fastq.gz TDCIPP-6hpf-3_S14_L001_R2_001.fastq.gz,fastq fastq,99767681.0,500238.0,TDCIPP 6hpf 3 S14 L001 R2 001.fastq.gz,0:99.64 1:99.80,A:25255312;C:24464400;G:24481390;T:25002218;N:564361,99,99,,,25255312,24464400,24481390,25002218,564361,SRX4644416,SRS3742486,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96117,0.96052,0.00028,0.00028,0.99924,0.99922,0.35418,0.35375,148,149,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48752,SRR7789606,SRX4644397,SRS3742467,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 6hpf 5 S6,,strain:5D|isolate:99|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 6hpf 5 S6,DMSO 6hpf 5 S6,DMSO 6hpf 5 S6,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-6hpf-5_S6_L001_R1_001.fastq.gz DMSO-6hpf-5_S6_L001_R2_001.fastq.gz,fastq fastq,107736291.0,525615.0,DMSO 6hpf 5 S6 L001 R2 001.fastq.gz,0:102.38 1:102.59,A:27251903;C:26520518;G:26567935;T:26878661;N:517274,102,102,,,27251903,26520518,26567935,26878661,517274,SRX4644397,SRS3742467,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96019,0.95982,0.00045,0.00043,0.99918,0.99916,0.37174,0.3343,151,148,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48753,SRR7789607,SRX4644396,SRS3742466,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 6hpf 1 S13,,strain:5D|isolate:100|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 6hpf 1 S13,TDCIPP 6hpf 1 S13,TDCIPP 6hpf 1 S13,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-6hpf-1_S13_L001_R2_001.fastq.gz TDCIPP-6hpf-1_S13_L001_R1_001.fastq.gz,fastq fastq,91271391.0,448917.0,TDCIPP 6hpf 1 S13 L001 R2 001.fastq.gz,0:101.61 1:101.71,A:23269221;C:22266290;G:22291849;T:22983659;N:460372,101,101,,,23269221,22266290,22291849,22983659,460372,SRX4644396,SRS3742466,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96069,0.96135,0.0005,0.00051,0.99916,0.99916,0.34621,0.3774,76,76,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48754,SRR7789608,SRX4644395,SRS3742465,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 2 S1,,strain:5D|isolate:91|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 2 S1,DMSO 3hpf 2 S1,DMSO 3hpf 2 S1,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-2_S1_L001_R1_001.fastq.gz DMSO-3hpf-2_S1_L001_R2_001.fastq.gz,fastq fastq,143035914.0,673342.0,DMSO 3hpf 2 S1 L001 R2 001.fastq.gz,0:106.19 1:106.24,A:37104542;C:34199194;G:34286529;T:36802368;N:643281,106,106,,,37104542,34199194,34286529,36802368,643281,SRX4644395,SRS3742465,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.97329,0.97288,0.00018,0.00017,0.99931,0.99931,0.41042,0.4514,39,39,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48755,SRR7789609,SRX4644394,SRS3742464,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 3 S2,,strain:5D|isolate:92|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 3 S2,DMSO 3hpf 3 S2,DMSO 3hpf 3 S2,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-3_S2_L001_R2_001.fastq.gz DMSO-3hpf-3_S2_L001_R1_001.fastq.gz,fastq fastq,121995763.0,560778.0,DMSO 3hpf 3 S2 L001 R2 001.fastq.gz,0:108.73 1:108.82,A:31569811;C:29316325;G:29402755;T:31346545;N:360327,108,108,,,31569811,29316325,29402755,31346545,360327,SRX4644394,SRS3742464,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96945,0.96871,0.00029,0.00031,0.99924,0.99924,0.3498,0.37356,134,134,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48756,SRR7789610,SRX4644393,SRS3742463,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 4 S3,,strain:5D|isolate:93|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 4 S3,DMSO 3hpf 4 S3,DMSO 3hpf 4 S3,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-4_S3_L001_R1_001.fastq.gz DMSO-3hpf-4_S3_L001_R2_001.fastq.gz,fastq fastq,131169421.0,625415.0,DMSO 3hpf 4 S3 L001 R2 001.fastq.gz,0:104.81 1:104.92,A:33973430;C:31403379;G:31490054;T:33651313;N:651245,104,104,,,33973430,31403379,31490054,33651313,651245,SRX4644393,SRS3742463,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98214,0.98232,0.00039,0.00042,0.99931,0.99928,0.43853,0.43838,94,94,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48757,SRR7789611,SRX4644392,SRS3742462,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 1 S10,,strain:5D|isolate:94|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 1 S10,TDCIPP 3hpf 1 S10,TDCIPP 3hpf 1 S10,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-1_S10_L001_R2_001.fastq.gz TDCIPP-3hpf-1_S10_L001_R1_001.fastq.gz,fastq fastq,142472001.0,675614.0,TDCIPP 3hpf 1 S10 L001 R2 001.fastq.gz,0:105.40 1:105.48,A:37237954;C:33780885;G:33866153;T:36894511;N:692498,105,105,,,37237954,33780885,33866153,36894511,692498,SRX4644392,SRS3742462,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98448,0.98456,3e-05,5e-05,0.99928,0.99926,0.44535,0.45235,89,89,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48758,SRR7789612,SRX4644391,SRS3742461,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 2 S11,,strain:5D|isolate:95|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 2 S11,TDCIPP 3hpf 2 S11,TDCIPP 3hpf 2 S11,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-2_S11_L001_R1_001.fastq.gz TDCIPP-3hpf-2_S11_L001_R2_001.fastq.gz,fastq fastq,135473127.0,649900.0,TDCIPP 3hpf 2 S11 L001 R2 001.fastq.gz,0:104.20 1:104.25,A:35005838;C:32424512;G:32538931;T:34827379;N:676467,104,104,,,35005838,32424512,32538931,34827379,676467,SRX4644391,SRS3742461,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98266,0.98245,0.0,0.0,0.99933,0.99933,0.49436,0.49577,59,59,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48759,SRR7789613,SRX4644390,SRS3742460,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 4 S12,,strain:5D|isolate:96|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 4 S12,TDCIPP 3hpf 4 S12,TDCIPP 3hpf 4 S12,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-4_S12_L001_R1_001.fastq.gz TDCIPP-3hpf-4_S12_L001_R2_001.fastq.gz,fastq fastq,126387362.0,600422.0,TDCIPP 3hpf 4 S12 L001 R1 001.fastq.gz,0:105.21 1:105.28,A:32731869;C:30187130;G:30351165;T:32470755;N:646443,105,105,,,32731869,30187130,30351165,32470755,646443,SRX4644390,SRS3742460,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.97915,0.97875,0.00012,0.00011,0.99933,0.99933,0.44431,0.44577,117,117,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48760,SRR7789614,SRX4644389,SRS3742459,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 6hpf 1 S4,,strain:5D|isolate:97|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 6hpf 1 S4,DMSO 6hpf 1 S4,DMSO 6hpf 1 S4,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-6hpf-1_S4_L001_R2_001.fastq.gz DMSO-6hpf-1_S4_L001_R1_001.fastq.gz,fastq fastq,95806388.0,464892.0,DMSO 6hpf 1 S4 L001 R2 001.fastq.gz,0:103.02 1:103.07,A:24562000;C:23294432;G:23307788;T:24218011;N:424157,103,103,,,24562000,23294432,23307788,24218011,424157,SRX4644389,SRS3742459,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95656,0.95712,0.0004,0.00039,0.99918,0.99916,0.34071,0.34145,94,151,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48761,SRR7789615,SRX4644388,SRS3742458,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 6hpf 3 S5,,strain:5D|isolate:98|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 6hpf 3 S5,DMSO 6hpf 3 S5,DMSO 6hpf 3 S5,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-6hpf-3_S5_L001_R1_001.fastq.gz DMSO-6hpf-3_S5_L001_R2_001.fastq.gz,fastq fastq,105210098.0,508250.0,DMSO 6hpf 3 S5 L001 R1 001.fastq.gz,0:103.44 1:103.57,A:26828273;C:25677269;G:25721655;T:26524232;N:458669,103,103,,,26828273,25677269,25721655,26524232,458669,SRX4644388,SRS3742458,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95583,0.95513,0.00047,0.00045,0.99916,0.99918,0.30844,0.29023,42,42,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 49617,SRR8002796,SRX4833752,SRS3900655,SRP165143,PRJNA495439,Danio rerio strain:TU Genome sequencing,PRJNA495439,Whole Genome Sequencing,To assessment mixture effects of zenrafish two mixtures and their twelve components were tested by reduced zebrfish transcriptome approach.,,,,,40# 7,,breed:TU|dev stage:32hpf|sex:pooled male and female|tissue:embryo|identified by:BPF 7|BioSampleModel:Model organism or animal,,,,,,,,,BbF 7,74,74,embryo post 8 32hpf post BbF exposure 0.0000007M,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP165143,,,40#-7.fastq.gz,fastq,67688833.0,605806.0,40# 7.fastq.gz,0:111.73,A:16049163;C:17757038;G:17836872;T:16045760;N:0,111,,,,16049163,17757038,17836872,16045760,0,SRX4833752,SRS3900655,SRA792561,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.92975,,0.0002,,0.97098,,0.4822,,174,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2018-10-11,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 49618,SRR8002797,SRX4833751,SRS3900654,SRP165143,PRJNA495439,Danio rerio strain:TU Genome sequencing,PRJNA495439,Whole Genome Sequencing,To assessment mixture effects of zenrafish two mixtures and their twelve components were tested by reduced zebrfish transcriptome approach.,,,,,40# 6,,breed:TU|dev stage:32hpf|sex:pooled male and female|tissue:embryo|identified by:BPF 6|BioSampleModel:Model organism or animal,,,,,,,,,BbF 6,73,73,embryo post 8 32hpf post BbF exposure 0.000007M,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP165143,,,40#-6.fastq.gz,fastq,121243678.0,1111061.0,40# 6.fastq.gz,0:109.12,A:28691499;C:32061221;G:31744743;T:28746215;N:0,109,,,,28691499,32061221,31744743,28746215,0,SRX4833751,SRS3900654,SRA792561,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.95605,,0.00018,,0.97049,,0.47484,,99,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2019-11-10,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 49619,SRR8002798,SRX4833750,SRS3900653,SRP165143,PRJNA495439,Danio rerio strain:TU Genome sequencing,PRJNA495439,Whole Genome Sequencing,To assessment mixture effects of zenrafish two mixtures and their twelve components were tested by reduced zebrfish transcriptome approach.,,,,,40# 5,,breed:TU|dev stage:32hpf|sex:pooled male and female|tissue:embryo|identified by:BPF 5|BioSampleModel:Model organism or animal,,,,,,,,,BbF 5,72,72,embryo post 8 32hpf post BbF exposure 0.00007M,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP165143,,,40#-5.fastq.gz,fastq,120375219.0,1104505.0,40# 5.fastq.gz,0:108.99,A:28370884;C:32019915;G:31648198;T:28336222;N:0,108,,,,28370884,32019915,31648198,28336222,0,SRX4833750,SRS3900653,SRA792561,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.96436,,0.00022,,0.97084,,0.47733,,98,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2019-11-10,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures 49620,SRR8002799,SRX4833749,SRS3900652,SRP165143,PRJNA495439,Danio rerio strain:TU Genome sequencing,PRJNA495439,Whole Genome Sequencing,To assessment mixture effects of zenrafish two mixtures and their twelve components were tested by reduced zebrfish transcriptome approach.,,,,,40# 4,,breed:TU|dev stage:32hpf|sex:pooled male and female|tissue:embryo|identified by:BPF 4|BioSampleModel:Model organism or animal,,,,,,,,,BbF 4,71,71,embryo post 8 32hpf post BbF exposure 0.0007M,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,ION_TORRENT,Ion Torrent Proton,,SRP165143,,,40#-4.fastq.gz,fastq,125415442.0,1144541.0,40# 4.fastq.gz,0:109.58,A:29503933;C:33394229;G:32896101;T:29621179;N:0,109,,,,29503933,33394229,32896101,29621179,0,SRX4833749,SRS3900652,SRA792561,Zebrafish embryo|School of the environment,Zebrafish embryo,1,0.9565,,0.00015,,0.97088,,0.48965,,95,,B,,usable mapping rate,ion_torrent,ion_torrent,unknown,random_priming,unknown,bulk,unknown,unknown,,Unknown,2019-11-10,Pharyngula,Embryo,Embryo Imprecise,All anatomical structures