rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 28513,SRR31643557,SRX27006657,SRS23471106,SRP467901,PRJNA1026724,vertebrate lungs,PRJNA1026724,Other,We provide comprehensive datasets including RNA Seq and single cell RNA sequencing scRAN seq of multiple tissues for white spotted bamboo shark scRNA seq of multiple tissues of the African lungfish and Senegal bichir genome of the bearded dragon scRAN seq of African bullfrog lung and central bearded dragon lung and H3k27ac and H3k4me1 CUT&Tag sequencing data of chicken embryonic lungs from stage E9 to study the origin and evelution of vertebrate lungs.,,pubmed:39953253,,,zebrafish,,strain:Cyprinidae|age:adult|collection date:2021 09|geo loc name:China: Wuhan city Wuhan Province|sex:not collected|tissue:swim bladder|BioSampleModel:Model organism or animal,,,,,,,,,scRNA Seq of zebrafish :swim blader,zebrafish swimbladder,zebrafish swimbladder,sequencing for single cell gene expression,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP467901,,,Dr_Sb-3_S1_L003_R2_001.fastq.gz Dr_Sb-3_S1_L003_R1_001.fastq.gz Dr_Sb-2_S1_L001_R2_001.fastq.gz Dr_Sb-2_S1_L001_R1_001.fastq.gz Dr_Sb-1_S1_L001_R2_001.fastq.gz Dr_Sb-1_S1_L001_R1_001.fastq.gz,fastq fastq fastq fastq fastq fastq,,,Dr Sb 1 S1 L001 R1 001.fastq.gz,,,,,,,,,,,,SRX27006657,,SRA2029673,Northwestern Polytechnical University|School of Ecology and Environment,Northwestern Polytechnical University,,,,,,,,,,,,,,,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,China,2024-12-08,Adult,Adult,Swim Bladder,Swim Bladder 33615,SRR30272850,SRX25733949,SRS22373737,SRP526812,PRJNA1148907,Single cell RNA sequencing to uncover tissue specific transcriptomic changes induced by perfluorooctanesulfonic acid PFOS in larval zebrafish Danio rerio,PRJNA1148907,Other,The aim is to to apply single cell RNA sequencing of zebrafish larvae to identify novel tissue specific mechanisms and processes following embryonic exposure to perfluorooctanesulfonic acid PFOS,,pubmed:39947082,,PFOS S2,Sample2,,strain:Tgins:GFP zebrafish on an AB wildtype background|age:72 hpf|dev stage:protruding mouth stage|collection date:2023 01 03|geo loc name:USA: Massachusetts|sex:NA|tissue:whole body cells|treatment:PFOS 16 uM|BioSampleModel:Model organism or animal,,,,,,,,,PFOS,PFOS,PFOS,PFOS S2 scRNAseq,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,NextSeq 500,,SRP526812,,,G194-S2-PFOS_S2_L001_R1_001.fastq.gz G194-S2-PFOS_S2_L001_R2_001.fastq.gz G194-S2-PFOS_S2_L002_R1_001.fastq.gz G194-S2-PFOS_S2_L002_R2_001.fastq.gz G194-S2-PFOS_S2_L003_R1_001.fastq.gz G194-S2-PFOS_S2_L003_R2_001.fastq.gz G194-S2-PFOS_S2_L004_R1_001.fastq.gz G194-S2-PFOS_S2_L004_R2_001.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq,21751958340.0,184338630.0,G194 S2 PFOS S2 L001 R1 001.fastq.gz,0:28 1:90,A:6239773453;C:4634671870;G:5196638658;T:5672561386;N:8312973,28,90,,,6239773453,4634671870,5196638658,5672561386,8312973,SRX25733949,SRS22373737,SRA1949185,University of Massachusetts Amherst|Environmental Health Sciences,University of Massachusetts Amherst,2,0.01021,0.92344,0.00451,0.22962,0.99328,0.79847,0.28896,0.51751,28,90,T,B,sc-like readlen,illumina,nextseq,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,United States,2024-08-16,Larval,Larval,Trunk,Surface Structure 33616,SRR30272851,SRX25733948,SRS22373736,SRP526812,PRJNA1148907,Single cell RNA sequencing to uncover tissue specific transcriptomic changes induced by perfluorooctanesulfonic acid PFOS in larval zebrafish Danio rerio,PRJNA1148907,Other,The aim is to to apply single cell RNA sequencing of zebrafish larvae to identify novel tissue specific mechanisms and processes following embryonic exposure to perfluorooctanesulfonic acid PFOS,,pubmed:39947082,,DMSO S1,Sample1,,strain:Tgins:GFP zebrafish on an AB wildtype background|age:72 hpf|dev stage:protruding mouth stage|collection date:2023 01 03|geo loc name:USA: Massachusetts|sex:NA|tissue:whole body cells|treatment:DMSO 0.01%|BioSampleModel:Model organism or animal,,,,,,,,,DMSO,DMSO,DMSO,DMSO S1 scRNAseq,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,NextSeq 500,,SRP526812,,,G194-S1-DMSO_S1_L001_R1_001.fastq.gz G194-S1-DMSO_S1_L001_R2_001.fastq.gz G194-S1-DMSO_S1_L002_R1_001.fastq.gz G194-S1-DMSO_S1_L002_R2_001.fastq.gz G194-S1-DMSO_S1_L003_R1_001.fastq.gz G194-S1-DMSO_S1_L003_R2_001.fastq.gz G194-S1-DMSO_S1_L004_R1_001.fastq.gz G194-S1-DMSO_S1_L004_R2_001.fastq.gz,fastq fastq fastq fastq fastq fastq fastq fastq,21636838838.0,183363041.0,G194 S1 DMSO S1 L001 R1 001.fastq.gz,0:28 1:90,A:6175214014;C:4647929260;G:5248646646;T:5556827078;N:8221840,28,90,,,6175214014,4647929260,5248646646,5556827078,8221840,SRX25733948,SRS22373736,SRA1949185,University of Massachusetts Amherst|Environmental Health Sciences,University of Massachusetts Amherst,2,0.01048,0.92488,0.00455,0.20966,0.99358,0.81464,0.28056,0.57876,28,90,T,B,sc-like readlen,illumina,nextseq,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,United States,2024-08-16,Larval,Larval,Trunk,Surface Structure 58873,SRR11509894,SRX8082006,SRS6450124,SRP255712,PRJNA623798,Single cell lineage tracing on endogenous scarring sites scLOESS,PRJNA623798,Other,Lineage recording of zebrafish embryogenesis reveals early cell fate commitment,,,1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. 3 independent replicates in total.,Target specific Amplification of Single Cell cDNA Library,SCC,,strain:AB line|age:7dpf|dev stage:larvae|sex:not applicable|tissue:Whole organism|collection date:2018 07 26|BioSampleModel:Model organism or animal,,,,,,,,,Single cell cDNA library Amplicon of zebrafish larva replicate 3,SCC replicate3,SCC replicate3,1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. PCR replicate 3.,,,AMPLICON,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP255712,,,SCC-replicate3_R1.fq.gz SCC-replicate3_R2.fq.gz,fastq fastq,14811756300.0,49372521.0,SCC replicate3 R1.fq.gz,0:150 1:150,A:3255250699;C:3018244265;G:3088919277;T:5446140655;N:3201404,150,150,,,3255250699,3018244265,3088919277,5446140655,3201404,SRX8082006,SRS6450124,SRA1063780,Sun Yat- sen University|Life Sicence School,Sun Yat- sen University,2,0.01015,0.97122,0.00049,0.00158,0.99841,0.97569,0.54867,0.48858,150,150,T,B,mate1 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,China,2020-04-10,Larval,Larval,Whole Organism,All anatomical structures 58874,SRR11509895,SRX8082005,SRS6450124,SRP255712,PRJNA623798,Single cell lineage tracing on endogenous scarring sites scLOESS,PRJNA623798,Other,Lineage recording of zebrafish embryogenesis reveals early cell fate commitment,,,1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. 3 independent replicates in total.,Target specific Amplification of Single Cell cDNA Library,SCC,,strain:AB line|age:7dpf|dev stage:larvae|sex:not applicable|tissue:Whole organism|collection date:2018 07 26|BioSampleModel:Model organism or animal,,,,,,,,,Single cell cDNA library Amplicon of zebrafish larva replicate 2,SCC replicate2,SCC replicate2,1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. PCR replicate 2.,,,AMPLICON,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP255712,,,SCC-replicate2_R2.fq.gz SCC-replicate2_R1.fq.gz,fastq fastq,19858547700.0,66195159.0,SCC replicate2 R1.fq.gz,0:150 1:150,A:4363166112;C:4066433314;G:4155737160;T:7269480395;N:3730719,150,150,,,4363166112,4066433314,4155737160,7269480395,3730719,SRX8082005,SRS6450124,SRA1063780,Sun Yat- sen University|Life Sicence School,Sun Yat- sen University,2,0.025,0.97152,0.00079,0.00143,0.99746,0.97668,0.74358,0.46727,150,150,T,B,mate1 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,China,2020-04-09,Larval,Larval,Whole Organism,All anatomical structures 58875,SRR11509896,SRX8082004,SRS6450124,SRP255712,PRJNA623798,Single cell lineage tracing on endogenous scarring sites scLOESS,PRJNA623798,Other,Lineage recording of zebrafish embryogenesis reveals early cell fate commitment,,,1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. 3 independent replicates in total.,Target specific Amplification of Single Cell cDNA Library,SCC,,strain:AB line|age:7dpf|dev stage:larvae|sex:not applicable|tissue:Whole organism|collection date:2018 07 26|BioSampleModel:Model organism or animal,,,,,,,,,Single cell cDNA library Amplicon of zebrafish larva replicate 1,SCC replicate1,SCC replicate1,1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. PCR replicate 1.,,,AMPLICON,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP255712,,,SCC-replicate1_R1.fq.gz SCC-replicate1_R2.fq.gz,fastq fastq,18191440200.0,60638134.0,SCC replicate1 R1.fq.gz,0:150 1:150,A:3994446536;C:3726446852;G:3814798796;T:6652431833;N:3316183,150,150,,,3994446536,3726446852,3814798796,6652431833,3316183,SRX8082004,SRS6450124,SRA1063780,Sun Yat- sen University|Life Sicence School,Sun Yat- sen University,2,0.03094,0.97334,0.00045,0.00127,0.99774,0.97824,0.80981,0.45378,150,150,T,B,mate1 technical by mapping diff,illumina,hiseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,China,2020-04-09,Larval,Larval,Whole Organism,All anatomical structures 61523,SRR12858253,SRX9325184,SRS7549492,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Day,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Day|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Day,3Day 2 S6,3Day 2 S6,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Day_2_S6_L004_R1_001.fastq.gz 3Day_2_S6_L004_R2_001.fastq.gz,fastq fastq,76033651818.0,251767059.0,3Day 2 S6 L004 R1 001.fastq.gz,0:151 1:151,A:35535267340;C:11863415027;G:11773502422;T:16858157612;N:3309417,151,151,,,35535267340,11863415027,11773502422,16858157612,3309417,SRX9325184,SRS7549492,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.86148,0.0,0.22304,1.0,0.7582,,0.53846,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61524,SRR12858254,SRX9325183,SRS7549492,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Day,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Day|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Day,3Day 1 S5,3Day 1 S5,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Day_1_S5_L004_R1_001.fastq.gz 3Day_1_S5_L004_R2_001.fastq.gz,fastq fastq,59092751626.0,195671363.0,3Day 1 S5 L004 R1 001.fastq.gz,0:151 1:151,A:27630588655;C:9241106126;G:9168471456;T:13050007147;N:2578242,151,151,,,27630588655,9241106126,9168471456,13050007147,2578242,SRX9325183,SRS7549492,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.86271,0.0,0.22343,1.0,0.76023,,0.54977,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61525,SRR12858255,SRX9325182,SRS7549493,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Hour,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Hour|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Hours,3Hour 4 S12,3Hour 4 S12,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Hour_4_S12_L004_R1_001.fastq.gz 3Hour_4_S12_L004_R2_001.fastq.gz,fastq fastq,72128136780.0,238834890.0,3Hour 4 S12 L004 R1 001.fastq.gz,0:151 1:151,A:33932689920;C:11046769968;G:10941298685;T:16204223580;N:3154627,151,151,,,33932689920,11046769968,10941298685,16204223580,3154627,SRX9325182,SRS7549493,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.84197,0.0,0.22466,1.0,0.78441,,0.56868,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61526,SRR12858256,SRX9325181,SRS7549493,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Hour,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Hour|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Hours,3Hour 3 S11,3Hour 3 S11,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Hour_3_S11_L004_R1_001.fastq.gz 3Hour_3_S11_L004_R2_001.fastq.gz,fastq fastq,80705527190.0,267236845.0,3Hour 3 S11 L004 R1 001.fastq.gz,0:151 1:151,A:37985436560;C:12358793423;G:12237346212;T:18120396893;N:3554102,151,151,,,37985436560,12358793423,12237346212,18120396893,3554102,SRX9325181,SRS7549493,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.84472,0.0,0.22522,1.0,0.78293,,0.57384,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61527,SRR12858257,SRX9325180,SRS7549493,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Hour,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Hour|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Hours,3Hour 2 S10,3Hour 2 S10,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Hour_2_S10_L004_R1_001.fastq.gz 3Hour_2_S10_L004_R2_001.fastq.gz,fastq fastq,76448858632.0,253141916.0,3Hour 2 S10 L004 R1 001.fastq.gz,0:151 1:151,A:35936389130;C:11685225790;G:11595239085;T:17228685305;N:3319322,151,151,,,35936389130,11685225790,11595239085,17228685305,3319322,SRX9325180,SRS7549493,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.84222,0.0,0.22514,1.0,0.78309,,0.56453,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61528,SRR12858258,SRX9325179,SRS7549493,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Hour,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Hour|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Hours,3Hour 1 S9,3Hour 1 S9,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Hour_1_S9_L004_R1_001.fastq.gz 3Hour_1_S9_L004_R2_001.fastq.gz,fastq fastq,74702264584.0,247358492.0,3Hour 1 S9 L004 R1 001.fastq.gz,0:151 1:151,A:35096290154;C:11422923493;G:11335995120;T:16843790763;N:3265054,151,151,,,35096290154,11422923493,11335995120,16843790763,3265054,SRX9325179,SRS7549493,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.84313,0.0,0.2256,1.0,0.78514,,0.57158,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61529,SRR12858259,SRX9325178,SRS7549491,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish intranasal PBS,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal PBS|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal PBS,Control 4 S4,Control 4 S4,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,Control_4_S4_L004_R1_001.fastq.gz Control_4_S4_L004_R2_001.fastq.gz,fastq fastq,63748002502.0,211086101.0,Control 4 S4 L004 R1 001.fastq.gz,0:151 1:151,A:29580785771;C:10210575747;G:10201571462;T:13752296624;N:2772898,151,151,,,29580785771,10210575747,10201571462,13752296624,2772898,SRX9325178,SRS7549491,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.87565,0.0,0.22003,1.0,0.76808,,0.5449,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61530,SRR12858260,SRX9325177,SRS7549491,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish intranasal PBS,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal PBS|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal PBS,Control 3 S3,Control 3 S3,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,Control_3_S3_L004_R1_001.fastq.gz Control_3_S3_L004_R2_001.fastq.gz,fastq fastq,59006583476.0,195386038.0,Control 3 S3 L004 R1 001.fastq.gz,0:151 1:151,A:27374753929;C:9460015806;G:9444431483;T:12724779257;N:2603001,151,151,,,27374753929,9460015806,9444431483,12724779257,2603001,SRX9325177,SRS7549491,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.87809,0.0,0.22265,1.0,0.77141,,0.54249,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61531,SRR12858261,SRX9325176,SRS7549492,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Day,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Day|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Day,3Day 2 S8,3Day 2 S8,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Day_4_S8_L004_R1_001.fastq.gz 3Day_4_S8_L004_R2_001.fastq.gz,fastq fastq,84540262488.0,279934644.0,3Day 4 S8 L004 R1 001.fastq.gz,0:151 1:151,A:39522904023;C:13210312500;G:13112786947;T:18690553925;N:3705093,151,151,,,39522904023,13210312500,13112786947,18690553925,3705093,SRX9325176,SRS7549492,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.86134,0.0,0.22228,1.0,0.75741,,0.53967,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61532,SRR12858262,SRX9325175,SRS7549492,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish Intranasal rSpike 3Day,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal 100ng r Spike 3Day|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal r Spike 3Day,3Day 3 S7,3Day 3 S7,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,3Day_3_S7_L004_R1_001.fastq.gz 3Day_3_S7_L004_R2_001.fastq.gz,fastq fastq,72504765812.0,240082006.0,3Day 3 S7 L004 R1 001.fastq.gz,0:151 1:151,A:33922644753;C:11322044063;G:11218554755;T:16038363159;N:3159082,151,151,,,33922644753,11322044063,11218554755,16038363159,3159082,SRX9325175,SRS7549492,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.86092,0.0,0.22194,1.0,0.75941,,0.54693,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61533,SRR12858263,SRX9325174,SRS7549491,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish intranasal PBS,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal PBS|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal PBS,Control 2 S2,Control 2 S2,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,Control_2_S2_L004_R1_001.fastq.gz Control_2_S2_L004_R2_001.fastq.gz,fastq fastq,64254998894.0,212764897.0,Control 2 S2 L004 R1 001.fastq.gz,0:151 1:151,A:29800534511;C:10295273086;G:10286925663;T:13869445548;N:2820086,151,151,,,29800534511,10295273086,10286925663,13869445548,2820086,SRX9325174,SRS7549491,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.87826,0.0,0.22134,1.0,0.77195,,0.54341,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System 61534,SRR12858264,SRX9325173,SRS7549491,SRP287979,PRJNA668529,Single Cell Olfactory Organ of Zebrafish exposed to r Spike from SARS CoV 2,PRJNA668529,Other,Captured fresh cells with 10x genomic chromium then sequenced with illumina NovaSeq,,,,,Zebrafish intranasal PBS,,strain:AB|age:3 Months|sex:female and male|tissue:Olfactory Rosette|treatment:Intranasal PBS|BioSampleModel:Model organism or animal,,,,,,,,,Single cell zebrafish olfactory organ: intranasal PBS,Control 1 S1,Control 1 S1,Followed Chromium Next GEM Single Cell 3 Reagent Kits v3.1,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP287979,,,Control_1_S1_L004_R1_001.fastq.gz Control_1_S1_L004_R2_001.fastq.gz,fastq fastq,69676036606.0,230715353.0,Control 1 S1 L004 R1 001.fastq.gz,0:151 1:151,A:32349942335;C:11154687198;G:11132501059;T:15035845934;N:3060080,151,151,,,32349942335,11154687198,11132501059,15035845934,3060080,SRX9325173,SRS7549491,SRA1141422,University of New Mexico|Biology,University of New Mexico,2,0.0,0.87698,0.0,0.2194,1.0,0.7685,,0.53763,151,151,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,random_priming,unknown,sc,single_cell_droplet,10x,,Mexico,2020-10-21,Adult,Adult,Brain,Nervous System