rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 24918,SRR25594442,SRX21322829,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,Z 2 1.fq,Z 2 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,Z-2_2.fq.gz Z-2_1.fq.gz,fastq fastq,5621492400.0,18738308.0,Z 2 1.fq.gz,0:150 1:150,A:1483421677;C:1306378425;G:1338052121;T:1493618330;N:21847,150,150,,,1483421677,1306378425,1338052121,1493618330,21847,SRX21322829,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94389,0.93819,0.03702,0.03621,0.71758,0.72423,0.43774,0.4558,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24919,SRR25594443,SRX21322828,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,Z 1 1.fq,Z 1 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,Z-1_2.fq.gz Z-1_1.fq.gz,fastq fastq,6301274700.0,21004249.0,Z 1 1.fq.gz,0:150 1:150,A:1671253253;C:1458678359;G:1491311308;T:1680006330;N:25450,150,150,,,1671253253,1458678359,1491311308,1680006330,25450,SRX21322828,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94339,0.93817,0.03831,0.03813,0.71752,0.72293,0.42611,0.43548,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24920,SRR25594444,SRX21322827,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,K 3 1.fq,K 3 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,K-3_2.fq.gz K-3_1.fq.gz,fastq fastq,5519682000.0,18398940.0,K 3 1.fq.gz,0:150 1:150,A:1469946965;C:1270791684;G:1304075220;T:1474846842;N:21289,150,150,,,1469946965,1270791684,1304075220,1474846842,21289,SRX21322827,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94356,0.93561,0.03986,0.03923,0.71877,0.72697,0.44771,0.44936,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24921,SRR25594445,SRX21322826,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,K 2 1.fq,K 2 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,K-2_1.fq.gz K-2_2.fq.gz,fastq fastq,5808261300.0,19360871.0,K 2 1.fq.gz,0:150 1:150,A:1538012312;C:1343217111;G:1375887577;T:1551118640;N:25660,150,150,,,1538012312,1343217111,1375887577,1551118640,25660,SRX21322826,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94469,0.94137,0.03929,0.03857,0.7175,0.71946,0.44395,0.44354,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24922,SRR25594446,SRX21322825,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,ZP 3 1.fq,ZP 3 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,ZP-3_1.fq.gz ZP-3_2.fq.gz,fastq fastq,5397938100.0,17993127.0,ZP 3 1.fq.gz,0:150 1:150,A:1438191584;C:1244532731;G:1271700792;T:1443491138;N:21855,150,150,,,1438191584,1244532731,1271700792,1443491138,21855,SRX21322825,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94839,0.94406,0.04345,0.04279,0.71719,0.72362,0.42772,0.4311,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24923,SRR25594447,SRX21322824,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,ZP 2 1.fq,ZP 2 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,ZP-2_1.fq.gz ZP-2_2.fq.gz,fastq fastq,6062424900.0,20208083.0,ZP 2 1.fq.gz,0:150 1:150,A:1612595576;C:1398589726;G:1427536119;T:1623678727;N:24752,150,150,,,1612595576,1398589726,1427536119,1623678727,24752,SRX21322824,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.95013,0.94657,0.04364,0.04342,0.71565,0.71908,0.44652,0.44832,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24924,SRR25594448,SRX21322823,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,ZP 1 1.fq,ZP 1 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,ZP-1_2.fq.gz ZP-1_1.fq.gz,fastq fastq,6487607100.0,21625357.0,ZP 1 1.fq.gz,0:150 1:150,A:1728514584;C:1494175744;G:1521726756;T:1743164500;N:25516,150,150,,,1728514584,1494175744,1521726756,1743164500,25516,SRX21322823,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94867,0.94432,0.04535,0.0449,0.71926,0.72348,0.43747,0.44661,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24925,SRR25594449,SRX21322822,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,Z 3 1.fq,Z 3 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,Z-3_1.fq.gz Z-3_2.fq.gz,fastq fastq,8111204700.0,27037349.0,Z 3 1.fq.gz,0:150 1:150,A:2143712842;C:1879826122;G:1918517283;T:2169119328;N:29125,150,150,,,2143712842,1879826122,1918517283,2169119328,29125,SRX21322822,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94485,0.94083,0.03886,0.03798,0.71362,0.71768,0.44066,0.44713,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 24926,SRR25594450,SRX21322821,SRS18569855,SRP454395,PRJNA1002816,Danio rerio Raw sequence reads,PRJNA1002816,Whole Genome Sequencing,Zebrafish Transcriptome,,,,,Zebrafish intestine,,strain:Not Applicable|isolate:Not Applicable|breed:Not Applicable|cultivar:Not Applicable|ecotype:Not Applicable|age:Not Applicable|dev stage:Not Applicable|collection date:Not Applicable|geo loc name:Not Applicable|sex:Not Applicable|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,Zebrafish Intestinal Transcriptome,K 1 1.fq,K 1 1.fq,Intestinal Transcriptome,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP454395,,,K-1_1.fq.gz K-1_2.fq.gz,fastq fastq,7164142200.0,23880474.0,K 1 1.fq.gz,0:150 1:150,A:1896647470;C:1661542391;G:1700422400;T:1905500150;N:29789,150,150,,,1896647470,1661542391,1700422400,1905500150,29789,SRX21322821,SRS18569855,SRA1689922,"Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences|fish","Yangtze River Fisheries Research Institute,Chinese Academy of Fishery Sciences",2,0.94635,0.94209,0.03738,0.03664,0.71961,0.72571,0.45014,0.44857,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-08-10,Undetermined,Undetermined,Gut,Digestive System 67005,SRR16972425,SRX13163301,SRS11094637,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,MU 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2021 01 21|collection date:2021 07 09|death date:2021 07 09|genotype:chs1 / |health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,MU 6M rep2,MU 6M rep2,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,,Daniorerio_6months_MU2-01T0003_good_1.fq.gz Daniorerio_6months_MU2-01T0003_good_2.fq.gz Daniorerio_6months_MU2_add-01T0003_good_1.fq.gz Daniorerio_6months_MU2_add-01T0003_good_2.fq.gz,fastq fastq fastq fastq,26247918860.0,88200239.0,Daniorerio 6months MU2 01T0003 good 1.fq.gz,0:148.80 1:148.80,A:6706581059;C:6362908903;G:6430710510;T:6747581679;N:136709,148,148,,,6706581059,6362908903,6430710510,6747581679,136709,SRX13163301,SRS11094637,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.94119,0.94122,0.05124,0.05059,0.75043,0.75065,0.52934,0.53052,140,140,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-18,Adult,Adult,Gut,Digestive System 67006,SRR16972426,SRX13163300,SRS11094638,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,WT 3M,,breed:TU|age:3 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2020 07 08|collection date:2020 10 15|death date:2020 10 15|genotype:wild type|health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,WT 3M rep2,WT 3M rep2,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_3months_WT2-T04_good_1.fq.gz Daniorerio_3months_WT2-T04_good_2.fq.gz,fastq fastq,8467967054.0,28305387.0,Daniorerio 3months WT2 T04 good 1.fq.gz,0:149.58 1:149.58,A:2259351363;C:1963646091;G:1984749237;T:2259951700;N:268663,149,149,,,2259351363,1963646091,1984749237,2259951700,268663,SRX13163300,SRS11094638,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.92857,0.9274,0.07369,0.07329,0.7344,0.73598,0.52047,0.53156,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 67007,SRR16972427,SRX13163299,SRS11094638,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,WT 3M,,breed:TU|age:3 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2020 07 08|collection date:2020 10 15|death date:2020 10 15|genotype:wild type|health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,WT 3M rep1,WT 3M rep1,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_3months_WT1-T03_good_1.fq.gz Daniorerio_3months_WT1-T03_good_2.fq.gz,fastq fastq,7212592596.0,24118086.0,Daniorerio 3months WT1 T03 good 1.fq.gz,0:149.53 1:149.53,A:1928347826;C:1670886595;G:1685298858;T:1927833118;N:226199,149,149,,,1928347826,1670886595,1685298858,1927833118,226199,SRX13163299,SRS11094638,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.92847,0.92926,0.07508,0.07526,0.7402,0.74115,0.53069,0.52994,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 67008,SRR16972428,SRX13163298,SRS11094637,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,MU 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2021 01 21|collection date:2021 07 09|death date:2021 07 09|genotype:chs1 / |health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,MU 6M rep1,MU 6M rep1,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,,Daniorerio_6months_MU1-01T0002_good_1.fq.gz Daniorerio_6months_MU1-01T0002_good_2.fq.gz Daniorerio_6months_MU1_add-01T0002_good_1.fq.gz Daniorerio_6months_MU1_add-01T0002_good_2.fq.gz,fastq fastq fastq fastq,25069949786.0,84048581.0,Daniorerio 6months MU1 01T0002 good 1.fq.gz,0:149.14 1:149.14,A:6557923073;C:5921477753;G:5998862929;T:6591554621;N:131410,149,149,,,6557923073,5921477753,5998862929,6591554621,131410,SRX13163298,SRS11094637,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.92686,0.92635,0.04539,0.04507,0.74024,0.74111,0.5104,0.51793,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-18,Adult,Adult,Gut,Digestive System 67009,SRR16972429,SRX13163297,SRS11094636,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,WT 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2021 01 21|collection date:2021 07 09|death date:2021 07 09|genotype:wild type|health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,WT 6M rep5,WT 6M rep5,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_6months_WT5-T11_good_1.fq.gz Daniorerio_6months_WT5-T11_good_2.fq.gz,fastq fastq,7033656400.0,23536846.0,Daniorerio 6months WT5 T11 good 1.fq.gz,0:149.42 1:149.42,A:1811251955;C:1673819413;G:1713312637;T:1835256740;N:15655,149,149,,,1811251955,1673819413,1713312637,1835256740,15655,SRX13163297,SRS11094636,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.93702,0.93617,0.05475,0.0541,0.74789,0.74752,0.54482,0.54579,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 67010,SRR16972430,SRX13163296,SRS11094636,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,WT 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2021 01 21|collection date:2021 07 09|death date:2021 07 09|genotype:wild type|health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,WT 6M rep4,WT 6M rep4,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_6months_WT4-T10_good_1.fq.gz Daniorerio_6months_WT4-T10_good_2.fq.gz,fastq fastq,7012965398.0,23448817.0,Daniorerio 6months WT4 T10 good 1.fq.gz,0:149.54 1:149.54,A:1853320249;C:1629815005;G:1669888653;T:1859925598;N:15893,149,149,,,1853320249,1629815005,1669888653,1859925598,15893,SRX13163296,SRS11094636,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.9271,0.92565,0.07612,0.07593,0.73466,0.73649,0.51338,0.51974,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 67011,SRR16972431,SRX13163295,SRS11094636,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,WT 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2021 01 21|collection date:2021 07 09|death date:2021 07 09|genotype:wild type|health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,WT 6M rep3,WT 6M rep3,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,,Daniorerio_6months_WT3-02T0002_good_1.fq.gz Daniorerio_6months_WT3-02T0002_good_2.fq.gz Daniorerio_6months_WT3_add-02T0002_good_1.fq.gz Daniorerio_6months_WT3_add-02T0002_good_2.fq.gz,fastq fastq fastq fastq,17759887004.0,59457706.0,Daniorerio 6months WT3 02T0002 good 1.fq.gz,0:149.35 1:149.35,A:4712859735;C:4120528947;G:4179191528;T:4747044398;N:262396,149,149,,,4712859735,4120528947,4179191528,4747044398,262396,SRX13163295,SRS11094636,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.94132,0.94052,0.05379,0.05353,0.76274,0.76301,0.53446,0.54191,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-18,Adult,Adult,Gut,Digestive System 67012,SRR16972432,SRX13163294,SRS11094636,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,WT 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2021 01 21|collection date:2021 07 09|death date:2021 07 09|genotype:wild type|health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,WT 6M rep2,WT 6M rep2,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,,Daniorerio_6months_WT2-02T0001_good_1.fq.gz Daniorerio_6months_WT2-02T0001_good_2.fq.gz Daniorerio_6months_WT2_add-02T0001_good_1.fq.gz Daniorerio_6months_WT2_add-02T0001_good_2.fq.gz,fastq fastq fastq fastq,17304877338.0,58005868.0,Daniorerio 6months WT2 02T0001 good 1.fq.gz,0:149.16 1:149.16,A:4567317204;C:4029770990;G:4089916090;T:4617621274;N:251780,149,149,,,4567317204,4029770990,4089916090,4617621274,251780,SRX13163294,SRS11094636,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.9417,0.94125,0.04903,0.04882,0.74594,0.74675,0.52815,0.52403,140,140,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-18,Adult,Adult,Gut,Digestive System 67013,SRR16972433,SRX13163293,SRS11094636,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,WT 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2021 01 21|collection date:2021 07 09|death date:2021 07 09|genotype:wild type|health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,WT 6M rep1,WT 6M rep1,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,,Daniorerio_6months_WT1-01T0001_good_1.fq.gz Daniorerio_6months_WT1-01T0001_good_2.fq.gz Daniorerio_6months_WT1_add-01T0001_good_1.fq.gz Daniorerio_6months_WT1_add-01T0001_good_2.fq.gz,fastq fastq fastq fastq,16602152324.0,55578781.0,Daniorerio 6months WT1 01T0001 good 1.fq.gz,0:149.36 1:149.36,A:4245434211;C:3997153641;G:4055895554;T:4303584997;N:83921,149,149,,,4245434211,3997153641,4055895554,4303584997,83921,SRX13163293,SRS11094636,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.94805,0.94713,0.03859,0.03827,0.7609,0.76021,0.52389,0.53306,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-18,Adult,Adult,Gut,Digestive System 67014,SRR16972434,SRX13163292,SRS11094635,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,MU 3M,,breed:TU|age:3 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2020 07 08|collection date:2020 10 15|death date:2020 10 15|genotype:chs1 / |health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,MU 3M rep2,MU 3M rep2,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_3months_MU2-T02_good_1.fq.gz Daniorerio_3months_MU2-T02_good_2.fq.gz,fastq fastq,7319481642.0,24455109.0,Daniorerio 3months MU2 T02 good 1.fq.gz,0:149.65 1:149.65,A:1950119505;C:1698268609;G:1716794920;T:1954208020;N:90588,149,149,,,1950119505,1698268609,1716794920,1954208020,90588,SRX13163292,SRS11094635,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.91605,0.91629,0.07171,0.0721,0.73099,0.73277,0.51829,0.51094,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 67015,SRR16972435,SRX13163291,SRS11094635,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,MU 3M,,breed:TU|age:3 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2020 07 08|collection date:2020 10 15|death date:2020 10 15|genotype:chs1 / |health state:health|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,MU 3M rep1,MU 3M rep1,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_3months_MU1-T01_good_1.fq.gz Daniorerio_3months_MU1-T01_good_2.fq.gz,fastq fastq,6689783730.0,22374730.0,Daniorerio 3months MU1 T01 good 1.fq.gz,0:149.49 1:149.49,A:1791825331;C:1543674432;G:1559586766;T:1794614998;N:82203,149,149,,,1791825331,1543674432,1559586766,1794614998,82203,SRX13163291,SRS11094635,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.89988,0.90023,0.07447,0.07414,0.73318,0.7347,0.52608,0.52855,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 67016,SRR16972436,SRX13163290,SRS11094634,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,SMU 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2020 07 08|collection date:2020 12 29|death date:2020 12 29|genotype:chs1 / |health state:sick|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,SMU 6M rep2,SMU 6M rep2,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_6months_SMU2-T09_good_1.fq.gz Daniorerio_6months_SMU2-T09_good_2.fq.gz,fastq fastq,6153057638.0,20567236.0,Daniorerio 6months SMU2 T09 good 1.fq.gz,0:149.58 1:149.58,A:1623915064;C:1438971834;G:1466951426;T:1623205362;N:13952,149,149,,,1623915064,1438971834,1466951426,1623205362,13952,SRX13163290,SRS11094634,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.89898,0.89771,0.08023,0.07995,0.715,0.71648,0.49782,0.48134,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 67017,SRR16972437,SRX13163289,SRS11094634,SRP346689,PRJNA781427,RNA Seq analysis of wild type and chs1 / zebrafish gut,PRJNA781427,Other,To investigate the mRNA expression profiles in the intestine of wild type and chitin synthase 1 knock out chs1 / zebrafish extracted total RNA of intestine from samples of different ages to generate cDNA libraries and sequenced using Illumina NovaSeq 6000 system platform.,,,,,SMU 6M,,breed:TU|age:6 mpf|dev stage:Adult|sex:not collected|tissue:Intestine|birth date:2020 07 08|collection date:2020 12 29|death date:2020 12 29|genotype:chs1 / |health state:sick|sample type:tissue sample|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult gut,SMU 6M rep1,SMU 6M rep1,Adults Danio rerio were euthanized by MS 222 whole intestines were collected from the abdomen region. Total RNA was extracted using TRIzol Plus RNA Purification Kit. cDNA libraries were generated by Oligo dT for sequencing.,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP346689,,loader:fastq load.py|options: doNotUseSharq allowEarlyFileEnd maxErrorCount=0,Daniorerio_6months_SMU1-T08_good_1.fq.gz Daniorerio_6months_SMU1-T08_good_2.fq.gz,fastq fastq,6402267634.0,21457841.0,Daniorerio 6months SMU1 T08 good 1.fq.gz,0:149.18 1:149.18,A:1705727400;C:1483728129;G:1516588316;T:1696209255;N:14534,149,149,,,1705727400,1483728129,1516588316,1696209255,14534,SRX13163289,SRS11094634,SRA1330971,Sun Yat-sen University|School of Life Sciences,Sun Yat-sen University,2,0.92502,0.92362,0.09504,0.09399,0.69323,0.69568,0.4847,0.48708,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2021-11-19,Adult,Adult,Gut,Digestive System 74161,SRR23576625,SRX19463432,SRS16856055,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M9,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut WT R3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M9,M9,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M9_1.fq.gz M9_2.fq.gz,fastq fastq,10791781600.0,107917816.0,M9 1.fq.gz,0:100 1:100,A:2848108353;C:2487301410;G:2561260439;T:2895111398;N:0,100,100,,,2848108353,2487301410,2561260439,2895111398,0,SRX19463432,SRS16856055,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95252,,0.05974,,0.79184,,0.6274,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74162,SRR23576626,SRX19463431,SRS16856054,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M8,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut WT R2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M8,M8,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M8_1.fq.gz M8_2.fq.gz,fastq fastq,10803624400.0,108036244.0,M8 1.fq.gz,0:100 1:100,A:2826927335;C:2516499907;G:2585204327;T:2874992831;N:0,100,100,,,2826927335,2516499907,2585204327,2874992831,0,SRX19463431,SRS16856054,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95494,,0.06268,,0.79139,,0.60873,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74163,SRR23576627,SRX19463430,SRS16856053,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M7,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut WT R1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M7,M7,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M7_1.fq.gz M7_2.fq.gz,fastq fastq,10794944600.0,107949446.0,M7 1.fq.gz,0:100 1:100,A:2822800001;C:2515936087;G:2583221720;T:2872986792;N:0,100,100,,,2822800001,2515936087,2583221720,2872986792,0,SRX19463430,SRS16856053,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95392,,0.0552,,0.78967,,0.61766,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74164,SRR23576628,SRX19463429,SRS16856052,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M6,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut tert with Cre R3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M6,M6,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M6_1.fq.gz M6_2.fq.gz,fastq fastq,10806717200.0,108067172.0,M6 1.fq.gz,0:100 1:100,A:2872422644;C:2476696362;G:2537205428;T:2920392766;N:0,100,100,,,2872422644,2476696362,2537205428,2920392766,0,SRX19463429,SRS16856052,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95383,,0.06563,,0.79293,,0.63948,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74165,SRR23576629,SRX19463428,SRS16856051,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M5,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut tert with Cre R2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M5,M5,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M5_1.fq.gz M5_2.fq.gz,fastq fastq,10553024000.0,105530240.0,M5 1.fq.gz,0:100 1:100,A:2756587901;C:2467885042;G:2531072385;T:2797478672;N:0,100,100,,,2756587901,2467885042,2531072385,2797478672,0,SRX19463428,SRS16856051,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95761,,0.05754,,0.79435,,0.61791,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74166,SRR23576630,SRX19463427,SRS16856048,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M4,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut tert with Cre R1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M4,M4,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M4_1.fq.gz M4_2.fq.gz,fastq fastq,10821109400.0,108211094.0,M4 1.fq.gz,0:100 1:100,A:2853720356;C:2500021520;G:2567460910;T:2899906614;N:0,100,100,,,2853720356,2500021520,2567460910,2899906614,0,SRX19463427,SRS16856048,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95171,,0.0636,,0.78644,,0.61061,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74174,SRR23576638,SRX19463419,SRS16856040,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M3,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut tert without xxx R3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M3,M3,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M3_1.fq.gz M3_2.fq.gz,fastq fastq,10811204400.0,108112044.0,M3 1.fq.gz,0:100 1:100,A:2826338851;C:2514522241;G:2594843889;T:2875499419;N:0,100,100,,,2826338851,2514522241,2594843889,2875499419,0,SRX19463419,SRS16856040,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95049,,0.05611,,0.79127,,0.60997,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74185,SRR23576649,SRX19463408,SRS16856031,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M2,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut tert without xxx R2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M2,M2,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M2_1.fq.gz M2_2.fq.gz,fastq fastq,10784874600.0,107848746.0,M2 1.fq.gz,0:100 1:100,A:2800268243;C:2532669517;G:2601088355;T:2850848485;N:0,100,100,,,2800268243,2532669517,2601088355,2850848485,0,SRX19463408,SRS16856031,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95513,,0.05808,,0.78171,,0.60306,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System 74186,SRR23576650,SRX19463407,SRS16856030,SRP423783,PRJNA937311,Telomere elongation in the gut extends systemic healthspan of zebrafish,PRJNA937311,Other,Telomere shortening is a hallmark of aging and is counteracted by telomerase. zebrafish gut is one of the organs with the fastest rate of telomere decline. However whether telomere dependent aging of an individual organ the gut causes systemic aging remains unknown. Here we show that preventing telomere shortening in the gut through tissue specific telomerase expression rescues premature aging of tert / . Conclusively we show that gut specific telomerase expression extends lifespan of tert / by 40 % while ameliorating natural aging. Our work demonstrates that delaying telomere shortening in the gut is sufficient to systemically counteract aging in zebrafish.,,,,,M1,,strain:AB|age:9 month|dev stage:adulte|sex:male|tissue:gut|biomaterial provider:EL MAI Mounir|birth date:2019/11/20|birth location:Nice France|treatment:gut tert without xxx R1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult male gut,M1,M1,RNA Seq of Danio rerio : adult male gut,,,RNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,BGISEQ,BGISEQ-500,,SRP423783,,,M1_1.fq.gz M1_2.fq.gz,fastq fastq,10797666400.0,107976664.0,M1 1.fq.gz,0:100 1:100,A:2818869037;C:2522566664;G:2592727107;T:2863503592;N:0,100,100,,,2818869037,2522566664,2592727107,2863503592,0,SRX19463407,SRS16856030,SRA1593824,Sun Yat-sen University Cancer Center|State Key Laboratory of Oncology in South China,Sun Yat-sen University Cancer Center Miguel Godinho Ferreira,1,0.95195,,0.06111,,0.78184,,0.6129,,100,,B,,usable mapping rate,bgi,bgi,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-02-21,Adult,Adult,Gut,Digestive System