rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
11815,ERR11799086,ERX11197445,ERS16222830,ERP149963,PRJEB64798,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E-MTAB-13228,Transcriptome Analysis,We performed bulk transcriptomic analyses to compare the expression profile of different brain myeloid leukocytes. We used both Tgp2ry12::p2ry12 GFP; cd45:DsRed and Tgmhc2dab:GFP; cd45:DsRed adult fish  allowing to FACS sort microglia identified in these animals as GFP+; DsRed+ or GFP+; DsRedlow cells  respectively. Brain putative DC like cells were obtained using the Tgmhc2dab:GFP; cd45:DsRed reporter  and isolated as GFP+; DsRedhigh. These analyses confirm that cd45:DsRedhigh; mhc2dab:GFP+ cells share a similar transcriptome distinct from microglia and are DC like cells.,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,,Protocols: FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted. RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,Sample 4,SAMEA114237385,Universite Libre de Bruxelles,ENA FIRST PUBLIC:2023 12 25T01:15:27Z|ENA LAST UPDATE:2023 12 25T01:15:27Z|External Id:SAMEA114237385|INSDC center name:Universite Libre de Bruxelles|INSDC first public:2023 12 25T01:15:27Z|INSDC last update:2023 12 25T01:15:27Z|INSDC status:public|Submitter Id:E MTAB 13228:Sample 4|age:6|broker name:ArrayExpress|cell type:microglial cell|collection date:not collected|common name:zebrafish|developmental stage:adult|genotype:wild type genotype|geographic location country and/or sea:not collected|isolate:not applicable|organism part:brain|sample name:E MTAB 13228:Sample 4|scientific name:Danio rerio|sex:male and female|strain:AB,,,,,,,,,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E MTAB 13228:Sample 4 p,Sample 4 p,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted.  RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,,RNA-Seq,TRANSCRIPTOMIC,Inverse rRNA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,ERP149963,Illumina NovaSeq 6000 paired end sequencing; Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,so_zf94_VW4_MDMG7_CD45lo_mhc2dab_MGA_S58_R1.fq.gz so_zf94_VW4_MDMG7_CD45lo_mhc2dab_MGA_S58_R2.fq.gz,fastq fastq,19305011730.0,95569365.0,E MTAB 13228:so zf94 VW4 MDMG7 CD45lo mhc2dab MGA S58 R,0:101 1:101,A:6768262250;C:3044091042;G:2847188942;T:6645295452;N:174044,101,101,,,6768262250,3044091042,2847188942,6645295452,174044,ERX11197445,ERS16222830,ERA26360556,European Bioinformatics Institute|European Nucleotide Archive,European Bioinformatics Institute|European Nucleotide Archive,2,0.57007,0.5231,0.45597,0.40582,0.91579,0.91674,0.58257,0.5625,101,101,B,B,biological fallback assumption,illumina,novaseq_era,unknown,rrna_depletion,unknown,bulk,bulk,bulk,,United Kingdom,2023-12-25,Adult,Adult,Brain,Nervous System
11816,ERR11799088,ERX11197447,ERS16222832,ERP149963,PRJEB64798,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E-MTAB-13228,Transcriptome Analysis,We performed bulk transcriptomic analyses to compare the expression profile of different brain myeloid leukocytes. We used both Tgp2ry12::p2ry12 GFP; cd45:DsRed and Tgmhc2dab:GFP; cd45:DsRed adult fish  allowing to FACS sort microglia identified in these animals as GFP+; DsRed+ or GFP+; DsRedlow cells  respectively. Brain putative DC like cells were obtained using the Tgmhc2dab:GFP; cd45:DsRed reporter  and isolated as GFP+; DsRedhigh. These analyses confirm that cd45:DsRedhigh; mhc2dab:GFP+ cells share a similar transcriptome distinct from microglia and are DC like cells.,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,,Protocols: FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted. RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,Sample 6,SAMEA114237387,Universite Libre de Bruxelles,ENA FIRST PUBLIC:2023 12 25T01:15:27Z|ENA LAST UPDATE:2023 12 25T01:15:27Z|External Id:SAMEA114237387|INSDC center name:Universite Libre de Bruxelles|INSDC first public:2023 12 25T01:15:27Z|INSDC last update:2023 12 25T01:15:27Z|INSDC status:public|Submitter Id:E MTAB 13228:Sample 6|age:6|broker name:ArrayExpress|cell type:myeloid leukocyte|collection date:not collected|common name:zebrafish|developmental stage:adult|genotype:wild type genotype|geographic location country and/or sea:not collected|isolate:not applicable|organism part:brain|sample name:E MTAB 13228:Sample 6|scientific name:Danio rerio|sex:male and female|strain:AB,,,,,,,,,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E MTAB 13228:Sample 6 p,Sample 6 p,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted.  RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,,RNA-Seq,TRANSCRIPTOMIC,Inverse rRNA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,ERP149963,Illumina NovaSeq 6000 paired end sequencing; Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,so_zf94_VW6_MDMF8_CD45hi_mhc2dab_MACA_S60_R2.fq.gz so_zf94_VW6_MDMF8_CD45hi_mhc2dab_MACA_S60_R1.fq.gz,fastq fastq,21028230098.0,104100149.0,E MTAB 13228:so zf94 VW6 MDMF8 CD45hi mhc2dab MACA S60 R,0:101 1:101,A:6738894716;C:4007335499;G:3664578692;T:6617229148;N:192043,101,101,,,6738894716,4007335499,3664578692,6617229148,192043,ERX11197447,ERS16222832,ERA26360556,European Bioinformatics Institute|European Nucleotide Archive,European Bioinformatics Institute|European Nucleotide Archive,2,0.69217,0.69414,0.45934,0.4539,0.86423,0.86344,0.64485,0.62976,101,101,B,B,biological fallback assumption,illumina,novaseq_era,unknown,rrna_depletion,unknown,bulk,bulk,bulk,,United Kingdom,2023-12-25,Adult,Adult,Brain,Nervous System
11817,ERR11799085,ERX11197444,ERS16222829,ERP149963,PRJEB64798,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E-MTAB-13228,Transcriptome Analysis,We performed bulk transcriptomic analyses to compare the expression profile of different brain myeloid leukocytes. We used both Tgp2ry12::p2ry12 GFP; cd45:DsRed and Tgmhc2dab:GFP; cd45:DsRed adult fish  allowing to FACS sort microglia identified in these animals as GFP+; DsRed+ or GFP+; DsRedlow cells  respectively. Brain putative DC like cells were obtained using the Tgmhc2dab:GFP; cd45:DsRed reporter  and isolated as GFP+; DsRedhigh. These analyses confirm that cd45:DsRedhigh; mhc2dab:GFP+ cells share a similar transcriptome distinct from microglia and are DC like cells.,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,,Protocols: FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted. RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,Sample 3,SAMEA114237384,Universite Libre de Bruxelles,ENA FIRST PUBLIC:2023 12 25T01:15:27Z|ENA LAST UPDATE:2023 12 25T01:15:27Z|External Id:SAMEA114237384|INSDC center name:Universite Libre de Bruxelles|INSDC first public:2023 12 25T01:15:27Z|INSDC last update:2023 12 25T01:15:27Z|INSDC status:public|Submitter Id:E MTAB 13228:Sample 3|age:6|broker name:ArrayExpress|cell type:microglial cell|collection date:not collected|common name:zebrafish|developmental stage:adult|genotype:wild type genotype|geographic location country and/or sea:not collected|isolate:not applicable|organism part:brain|sample name:E MTAB 13228:Sample 3|scientific name:Danio rerio|sex:male and female|strain:AB,,,,,,,,,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E MTAB 13228:Sample 3 p,Sample 3 p,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted.  RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,,RNA-Seq,TRANSCRIPTOMIC,Inverse rRNA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,ERP149963,Illumina NovaSeq 6000 paired end sequencing; Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,so_zf94_VW3_MDMG1_CD45lo_mhc2dab_MGA_S57_R1.fq.gz so_zf94_VW3_MDMG1_CD45lo_mhc2dab_MGA_S57_R2.fq.gz,fastq fastq,20720724286.0,102577843.0,E MTAB 13228:so zf94 VW3 MDMG1 CD45lo mhc2dab MGA S57 R,0:101 1:101,A:7221245295;C:3305546836;G:3154595537;T:7039147315;N:189303,101,101,,,7221245295,3305546836,3154595537,7039147315,189303,ERX11197444,ERS16222829,ERA26360556,European Bioinformatics Institute|European Nucleotide Archive,European Bioinformatics Institute|European Nucleotide Archive,2,0.6027,0.56103,0.46397,0.41738,0.90536,0.90473,0.59858,0.59246,101,101,B,B,biological fallback assumption,illumina,novaseq_era,unknown,rrna_depletion,unknown,bulk,bulk,bulk,,United Kingdom,2023-12-25,Adult,Adult,Brain,Nervous System
11818,ERR11799087,ERX11197446,ERS16222831,ERP149963,PRJEB64798,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E-MTAB-13228,Transcriptome Analysis,We performed bulk transcriptomic analyses to compare the expression profile of different brain myeloid leukocytes. We used both Tgp2ry12::p2ry12 GFP; cd45:DsRed and Tgmhc2dab:GFP; cd45:DsRed adult fish  allowing to FACS sort microglia identified in these animals as GFP+; DsRed+ or GFP+; DsRedlow cells  respectively. Brain putative DC like cells were obtained using the Tgmhc2dab:GFP; cd45:DsRed reporter  and isolated as GFP+; DsRedhigh. These analyses confirm that cd45:DsRedhigh; mhc2dab:GFP+ cells share a similar transcriptome distinct from microglia and are DC like cells.,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,,Protocols: FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted. RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,Sample 5,SAMEA114237386,Universite Libre de Bruxelles,ENA FIRST PUBLIC:2023 12 25T01:15:27Z|ENA LAST UPDATE:2023 12 25T01:15:27Z|External Id:SAMEA114237386|INSDC center name:Universite Libre de Bruxelles|INSDC first public:2023 12 25T01:15:27Z|INSDC last update:2023 12 25T01:15:27Z|INSDC status:public|Submitter Id:E MTAB 13228:Sample 5|age:6|broker name:ArrayExpress|cell type:myeloid leukocyte|collection date:not collected|common name:zebrafish|developmental stage:adult|genotype:wild type genotype|geographic location country and/or sea:not collected|isolate:not applicable|organism part:brain|sample name:E MTAB 13228:Sample 5|scientific name:Danio rerio|sex:male and female|strain:AB,,,,,,,,,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E MTAB 13228:Sample 5 p,Sample 5 p,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted.  RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,,RNA-Seq,TRANSCRIPTOMIC,Inverse rRNA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,ERP149963,Illumina NovaSeq 6000 paired end sequencing; Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,so_zf94_VW5_MDMF2_CD45hi_mhc2dab_MACA_S59_R2.fq.gz so_zf94_VW5_MDMF2_CD45hi_mhc2dab_MACA_S59_R1.fq.gz,fastq fastq,20557799368.0,101771284.0,E MTAB 13228:so zf94 VW5 MDMF2 CD45hi mhc2dab MACA S59 R,0:101 1:101,A:5872430236;C:4635392917;G:4244261404;T:5805533335;N:181476,101,101,,,5872430236,4635392917,4244261404,5805533335,181476,ERX11197446,ERS16222831,ERA26360556,European Bioinformatics Institute|European Nucleotide Archive,European Bioinformatics Institute|European Nucleotide Archive,2,0.48524,0.49426,0.30765,0.31318,0.87008,0.86918,0.60597,0.58678,101,101,B,B,biological fallback assumption,illumina,novaseq_era,unknown,rrna_depletion,unknown,bulk,bulk,bulk,,United Kingdom,2023-12-25,Adult,Adult,Brain,Nervous System
11819,ERR11799083,ERX11197442,ERS16222827,ERP149963,PRJEB64798,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E-MTAB-13228,Transcriptome Analysis,We performed bulk transcriptomic analyses to compare the expression profile of different brain myeloid leukocytes. We used both Tgp2ry12::p2ry12 GFP; cd45:DsRed and Tgmhc2dab:GFP; cd45:DsRed adult fish  allowing to FACS sort microglia identified in these animals as GFP+; DsRed+ or GFP+; DsRedlow cells  respectively. Brain putative DC like cells were obtained using the Tgmhc2dab:GFP; cd45:DsRed reporter  and isolated as GFP+; DsRedhigh. These analyses confirm that cd45:DsRedhigh; mhc2dab:GFP+ cells share a similar transcriptome distinct from microglia and are DC like cells.,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,,Protocols: FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted. RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,Sample 1,SAMEA114237382,Universite Libre de Bruxelles,ENA FIRST PUBLIC:2023 12 25T01:15:27Z|ENA LAST UPDATE:2023 12 25T01:15:27Z|External Id:SAMEA114237382|INSDC center name:Universite Libre de Bruxelles|INSDC first public:2023 12 25T01:15:27Z|INSDC last update:2023 12 25T01:15:27Z|INSDC status:public|Submitter Id:E MTAB 13228:Sample 1|age:6|broker name:ArrayExpress|cell type:microglial cell|collection date:not collected|common name:zebrafish|developmental stage:adult|genotype:wild type genotype|geographic location country and/or sea:not collected|isolate:not applicable|organism part:brain|sample name:E MTAB 13228:Sample 1|scientific name:Danio rerio|sex:male and female|strain:AB,,,,,,,,,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E MTAB 13228:Sample 1 p,Sample 1 p,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted.  RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,,RNA-Seq,TRANSCRIPTOMIC,Inverse rRNA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,ERP149963,Illumina NovaSeq 6000 paired end sequencing; Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,so_zf94_VW1_P2Y12_CD45lo_MGA_S55_R2.fq.gz so_zf94_VW1_P2Y12_CD45lo_MGA_S55_R1.fq.gz,fastq fastq,24592452226.0,121744813.0,E MTAB 13228:so zf94 VW1 P2Y12 CD45lo MGA S55 R,0:101 1:101,A:6964719283;C:5587681189;G:5075783189;T:6964040906;N:227659,101,101,,,6964719283,5587681189,5075783189,6964040906,227659,ERX11197442,ERS16222827,ERA26360556,European Bioinformatics Institute|European Nucleotide Archive,European Bioinformatics Institute|European Nucleotide Archive,2,0.82038,0.82668,0.39096,0.39605,0.82532,0.82446,0.63514,0.57014,101,101,B,B,biological fallback assumption,illumina,novaseq_era,unknown,rrna_depletion,unknown,bulk,bulk,bulk,,United Kingdom,2023-12-25,Adult,Adult,Brain,Nervous System
11820,ERR11799084,ERX11197443,ERS16222828,ERP149963,PRJEB64798,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E-MTAB-13228,Transcriptome Analysis,We performed bulk transcriptomic analyses to compare the expression profile of different brain myeloid leukocytes. We used both Tgp2ry12::p2ry12 GFP; cd45:DsRed and Tgmhc2dab:GFP; cd45:DsRed adult fish  allowing to FACS sort microglia identified in these animals as GFP+; DsRed+ or GFP+; DsRedlow cells  respectively. Brain putative DC like cells were obtained using the Tgmhc2dab:GFP; cd45:DsRed reporter  and isolated as GFP+; DsRedhigh. These analyses confirm that cd45:DsRedhigh; mhc2dab:GFP+ cells share a similar transcriptome distinct from microglia and are DC like cells.,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,,Protocols: FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted. RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,Sample 2,SAMEA114237383,Universite Libre de Bruxelles,ENA FIRST PUBLIC:2023 12 25T01:15:27Z|ENA LAST UPDATE:2023 12 25T01:15:27Z|External Id:SAMEA114237383|INSDC center name:Universite Libre de Bruxelles|INSDC first public:2023 12 25T01:15:27Z|INSDC last update:2023 12 25T01:15:27Z|INSDC status:public|Submitter Id:E MTAB 13228:Sample 2|age:6|broker name:ArrayExpress|cell type:microglial cell|collection date:not collected|common name:zebrafish|developmental stage:adult|genotype:wild type genotype|geographic location country and/or sea:not collected|isolate:not applicable|organism part:brain|sample name:E MTAB 13228:Sample 2|scientific name:Danio rerio|sex:male and female|strain:AB,,,,,,,,,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,E MTAB 13228:Sample 2 p,Sample 2 p,Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,FACS sorting of brain leukocytes. Approximately 8 000 microglial cells p2ry12+; cd45+ or mhc2dab+; cd45low  n=2 for each Tg and 1 200 DC like cells mhc2dab+; cd45high  n=2 were sorted.  RNA Ovation Solo RNA Seq System NuGen TECAN with the SoLo Custom AnyDeplete Probe Mix Zebrafish probe set,,RNA-Seq,TRANSCRIPTOMIC,Inverse rRNA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,ERP149963,Illumina NovaSeq 6000 paired end sequencing; Transcriptomic analysis of microglia and DC like cells sorted using different reporter lines,ENA FIRST PUBLIC:2023 12 25|ENA LAST UPDATE:2023 12 25,so_zf94_VW2_P2Y12_CD45lo_MGA_S56_R2.fq.gz so_zf94_VW2_P2Y12_CD45lo_MGA_S56_R1.fq.gz,fastq fastq,23692841994.0,117291297.0,E MTAB 13228:so zf94 VW2 P2Y12 CD45lo MGA S56 R,0:101 1:101,A:6997658831;C:5103576511;G:4615471075;T:6975924499;N:211078,101,101,,,6997658831,5103576511,4615471075,6975924499,211078,ERX11197443,ERS16222828,ERA26360556,European Bioinformatics Institute|European Nucleotide Archive,European Bioinformatics Institute|European Nucleotide Archive,2,0.78961,0.79279,0.39456,0.39476,0.8227,0.82309,0.62072,0.61776,101,101,B,B,biological fallback assumption,illumina,novaseq_era,unknown,rrna_depletion,unknown,bulk,bulk,bulk,,United Kingdom,2023-12-25,Adult,Adult,Brain,Nervous System