rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
47611,SRR6671794,SRX3648486,SRS2913085,SRP132190,PRJNA432942,Zebrafish genes regulated in response to Mucor circinelloides infection,PRJNA432942,Other,Determination of the genes that can be important for the defense of the host to infection for Mucorales fungi  using zebrafish and the fungus Mucor circinelloides as host and pathogen model  respectively. Total RNA was sequenced RNA seq from abdominal organs of infected fish.,,,,,PBS2,,strain:AB|dev stage:Adult|sex:not determined|tissue:Abdomen|treatment:Control innoculated with PBS|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Darnio rerio: uninffected,PBS2,PBS2,Total RNA isolated from uninfected abdominal tissue was used to generate the library using truseq kit,,,RNA-Seq,TRANSCRIPTOMIC,RT-PCR,SINGLE,ILLUMINA,Illumina HiSeq 2500,,SRP132190,,,PBS2_GCCAAT_L001_R1_001_BH8U70ADXX.filt.fastq.gz,fastq,792892359.0,15546909.0,PBS2 GCCAAT L001 R1 001 BH8U70ADXX.filt.fastq.gz,0:51,A:207417646;C:188867370;G:187996499;T:208448675;N:162169,51,,,,207417646,188867370,187996499,208448675,162169,SRX3648486,SRS2913085,SRA655550,University of Murcia|Genetics and Microbiology,University of Murcia,1,0.92826,,0.02642,,0.72815,,0.45776,,51,,B,,usable mapping rate,illumina,hiseq_era,unknown,other,trueseq,bulk,unknown,unknown,,Spain,2018-09-28,Adult,Adult,Trunk,Surface Structure
47612,SRR6671795,SRX3648485,SRS2913084,SRP132190,PRJNA432942,Zebrafish genes regulated in response to Mucor circinelloides infection,PRJNA432942,Other,Determination of the genes that can be important for the defense of the host to infection for Mucorales fungi  using zebrafish and the fungus Mucor circinelloides as host and pathogen model  respectively. Total RNA was sequenced RNA seq from abdominal organs of infected fish.,,,,,RDRZ,,strain:AB|dev stage:Adult|sex:not determined|tissue:Abdomen|treatment:Infected with Mucor circinelloides spores|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Darnio rerio: infected with Mucor circinelloides,RDRZ,RDRZ,Total RNA isolated from abdominal tissue infected with Mucor circinelloides was used to generate the library using truseq kit,,,RNA-Seq,TRANSCRIPTOMIC,RT-PCR,SINGLE,ILLUMINA,Illumina HiSeq 2500,,SRP132190,,,RDRZ_TGACCA_L001_R1_001_BH8U70ADXX.filt.fastq.gz,fastq,741005418.0,14529518.0,RDRZ TGACCA L001 R1 001 BH8U70ADXX.filt.fastq.gz,0:51,A:192330774;C:178252917;G:175501754;T:194766886;N:153087,51,,,,192330774,178252917,175501754,194766886,153087,SRX3648485,SRS2913084,SRA655550,University of Murcia|Genetics and Microbiology,University of Murcia,1,0.91685,,0.03703,,0.70873,,0.49947,,51,,B,,usable mapping rate,illumina,hiseq_era,unknown,other,trueseq,bulk,unknown,unknown,,Spain,2018-09-28,Adult,Adult,Trunk,Surface Structure