rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 10407,ERR9077202,ERX8620336,ERS10857224,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT5S8,SAMEA13254181,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254181|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT5S8|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT5S8|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT5S8 s,Sv2aWT5S8 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT5S8L001-1.fastq.gz,fastq,652046291.0,8633105.0,E MTAB 11505:sv2aWT5S8L001,0:75.53 1:0,A:159570243;C:156420495;G:154853315;T:181073030;N:129208,75,0,,,159570243,156420495,154853315,181073030,129208,ERX8620336,ERS10857224,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95245,,0.1148,,0.65756,,0.47011,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10408,ERR9077203,ERX8620336,ERS10857224,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT5S8,SAMEA13254181,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254181|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT5S8|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT5S8|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT5S8 s,Sv2aWT5S8 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT5S8L002-1.fastq.gz,fastq,653840525.0,8656886.0,E MTAB 11505:sv2aWT5S8L002,0:75.53 1:0,A:159902458;C:156826842;G:155509070;T:181475104;N:127051,75,0,,,159902458,156826842,155509070,181475104,127051,ERX8620336,ERS10857224,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95226,,0.1156,,0.65792,,0.4667,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10409,ERR9077204,ERX8620336,ERS10857224,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT5S8,SAMEA13254181,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254181|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT5S8|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT5S8|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT5S8 s,Sv2aWT5S8 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT5S8L003-1.fastq.gz,fastq,659584196.0,8732885.0,E MTAB 11505:sv2aWT5S8L003,0:75.53 1:0,A:161257146;C:158299734;G:156793443;T:183128972;N:104901,75,0,,,161257146,158299734,156793443,183128972,104901,ERX8620336,ERS10857224,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95298,,0.11485,,0.65798,,0.46853,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10410,ERR9077205,ERX8620336,ERS10857224,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT5S8,SAMEA13254181,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254181|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT5S8|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT5S8|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT5S8 s,Sv2aWT5S8 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT5S8L004-1.fastq.gz,fastq,666627746.0,8826123.0,E MTAB 11505:sv2aWT5S8L004,0:75.53 1:0,A:162975131;C:159937258;G:158506242;T:185106149;N:102966,75,0,,,162975131,159937258,158506242,185106149,102966,ERX8620336,ERS10857224,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.9531,,0.11425,,0.65736,,0.47309,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10411,ERR9077198,ERX8620335,ERS10857223,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT4S7,SAMEA13254180,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254180|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT4S7|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT4S7|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT4S7 s,Sv2aWT4S7 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT4S7L001-1.fastq.gz,fastq,683751258.0,9051795.0,E MTAB 11505:sv2aWT4S7L001,0:75.54 1:0,A:162889923;C:167127644;G:164779384;T:188822907;N:131400,75,0,,,162889923,167127644,164779384,188822907,131400,ERX8620335,ERS10857223,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95739,,0.0959,,0.6606,,0.46826,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10412,ERR9077199,ERX8620335,ERS10857223,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT4S7,SAMEA13254180,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254180|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT4S7|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT4S7|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT4S7 s,Sv2aWT4S7 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT4S7L002-1.fastq.gz,fastq,684187711.0,9057591.0,E MTAB 11505:sv2aWT4S7L002,0:75.54 1:0,A:162923879;C:167246213;G:165071145;T:188818774;N:127700,75,0,,,162923879,167246213,165071145,188818774,127700,ERX8620335,ERS10857223,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95724,,0.0959,,0.66036,,0.47026,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10413,ERR9077200,ERX8620335,ERS10857223,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT4S7,SAMEA13254180,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254180|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT4S7|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT4S7|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT4S7 s,Sv2aWT4S7 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT4S7L003-1.fastq.gz,fastq,692320213.0,9165132.0,E MTAB 11505:sv2aWT4S7L003,0:75.54 1:0,A:164772792;C:169329920;G:166952052;T:191164422;N:101027,75,0,,,164772792,169329920,166952052,191164422,101027,ERX8620335,ERS10857223,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95786,,0.09701,,0.66131,,0.47564,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10414,ERR9077201,ERX8620335,ERS10857223,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT4S7,SAMEA13254180,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254180|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT4S7|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT4S7|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT4S7 s,Sv2aWT4S7 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT4S7L004-1.fastq.gz,fastq,697047881.0,9227702.0,E MTAB 11505:sv2aWT4S7L004,0:75.54 1:0,A:165881728;C:170388393;G:168105900;T:192572068;N:99792,75,0,,,165881728,170388393,168105900,192572068,99792,ERX8620335,ERS10857223,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.9584,,0.09565,,0.66115,,0.46967,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10415,ERR9077194,ERX8620334,ERS10857222,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT3S2,SAMEA13254179,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254179|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT3S2|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT3S2|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT3S2 s,Sv2aWT3S2 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT3S2L001-1.fastq.gz,fastq,723508205.0,9579193.0,E MTAB 11505:sv2aWT3S2L001,0:75.53 1:0,A:177832489;C:174193135;G:169978598;T:201360184;N:143799,75,0,,,177832489,174193135,169978598,201360184,143799,ERX8620334,ERS10857222,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95218,,0.11732,,0.65916,,0.47955,,71,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10416,ERR9077195,ERX8620334,ERS10857222,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT3S2,SAMEA13254179,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254179|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT3S2|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT3S2|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT3S2 s,Sv2aWT3S2 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT3S2L002-1.fastq.gz,fastq,726190024.0,9614674.0,E MTAB 11505:sv2aWT3S2L002,0:75.53 1:0,A:178408224;C:174776263;G:170820745;T:202047224;N:137568,75,0,,,178408224,174776263,170820745,202047224,137568,ERX8620334,ERS10857222,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95093,,0.11567,,0.65865,,0.46877,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10417,ERR9077196,ERX8620334,ERS10857222,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT3S2,SAMEA13254179,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254179|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT3S2|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT3S2|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT3S2 s,Sv2aWT3S2 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT3S2L003-1.fastq.gz,fastq,735499955.0,9737845.0,E MTAB 11505:sv2aWT3S2L003,0:75.53 1:0,A:180659962;C:177141362;G:172905323;T:204678308;N:115000,75,0,,,180659962,177141362,172905323,204678308,115000,ERX8620334,ERS10857222,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95233,,0.11614,,0.65898,,0.47114,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10418,ERR9077197,ERX8620334,ERS10857222,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT3S2,SAMEA13254179,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254179|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT3S2|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT3S2|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT3S2 s,Sv2aWT3S2 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT3S2L004-1.fastq.gz,fastq,745285512.0,9867337.0,E MTAB 11505:sv2aWT3S2L004,0:75.53 1:0,A:183067487;C:179408382;G:175250814;T:207445912;N:112917,75,0,,,183067487,179408382,175250814,207445912,112917,ERX8620334,ERS10857222,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95245,,0.11655,,0.65857,,0.47087,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10419,ERR9077190,ERX8620333,ERS10857221,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT1S1,SAMEA13254178,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254178|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT1S1|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT1S1|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT1S1 s,Sv2aWT1S1 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT1S1L001-1.fastq.gz,fastq,647414748.0,8571883.0,E MTAB 11505:sv2aWT1S1L001,0:75.53 1:0,A:154593859;C:160498057;G:153809612;T:178389112;N:124108,75,0,,,154593859,160498057,153809612,178389112,124108,ERX8620333,ERS10857221,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95955,,0.08686,,0.65955,,0.47406,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10420,ERR9077191,ERX8620333,ERS10857221,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT1S1,SAMEA13254178,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254178|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT1S1|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT1S1|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT1S1 s,Sv2aWT1S1 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT1S1L002-1.fastq.gz,fastq,646657758.0,8561861.0,E MTAB 11505:sv2aWT1S1L002,0:75.53 1:0,A:154348044;C:160294625;G:153804048;T:178092212;N:118829,75,0,,,154348044,160294625,153804048,178092212,118829,ERX8620333,ERS10857221,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95942,,0.08632,,0.65991,,0.47539,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10421,ERR9077192,ERX8620333,ERS10857221,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT1S1,SAMEA13254178,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254178|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT1S1|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT1S1|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT1S1 s,Sv2aWT1S1 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT1S1L003-1.fastq.gz,fastq,654781451.0,8669333.0,E MTAB 11505:sv2aWT1S1L003,0:75.53 1:0,A:156252744;C:162396721;G:155681450;T:180352911;N:97625,75,0,,,156252744,162396721,155681450,180352911,97625,ERX8620333,ERS10857221,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95972,,0.08498,,0.66137,,0.47457,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10422,ERR9077193,ERX8620333,ERS10857221,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aWT1S1,SAMEA13254178,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254178|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aWT1S1|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/+|individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aWT1S1|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aWT1S1 s,Sv2aWT1S1 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/+,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aWT1S1L004-1.fastq.gz,fastq,659716937.0,8734618.0,E MTAB 11505:sv2aWT1S1L004,0:75.53 1:0,A:157367211;C:163585842;G:156911139;T:181757809;N:94936,75,0,,,157367211,163585842,156911139,181757809,94936,ERX8620333,ERS10857221,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95985,,0.08585,,0.65857,,0.47349,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10423,ERR9077186,ERX8620332,ERS10857220,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO6S12,SAMEA13254177,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254177|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO6S12|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO6S12|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO6S12 s,Sv2aHO6S12 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO6S12L001-1.fastq.gz,fastq,675018261.0,8937958.0,E MTAB 11505:sv2aHO6S12L001,0:75.52 1:0,A:166564263;C:160539328;G:160003980;T:187773509;N:137181,75,0,,,166564263,160539328,160003980,187773509,137181,ERX8620332,ERS10857220,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94964,,0.13009,,0.65413,,0.47079,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10424,ERR9077187,ERX8620332,ERS10857220,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO6S12,SAMEA13254177,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254177|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO6S12|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO6S12|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO6S12 s,Sv2aHO6S12 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO6S12L002-1.fastq.gz,fastq,672995667.0,8911161.0,E MTAB 11505:sv2aHO6S12L002,0:75.52 1:0,A:165990319;C:160039398;G:159722501;T:187108781;N:134668,75,0,,,165990319,160039398,159722501,187108781,134668,ERX8620332,ERS10857220,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94837,,0.13029,,0.65744,,0.47959,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10425,ERR9077188,ERX8620332,ERS10857220,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO6S12,SAMEA13254177,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254177|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO6S12|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO6S12|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO6S12 s,Sv2aHO6S12 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO6S12L003-1.fastq.gz,fastq,683276767.0,9047147.0,E MTAB 11505:sv2aHO6S12L003,0:75.52 1:0,A:168501690;C:162583852;G:162063190;T:190018001;N:110034,75,0,,,168501690,162583852,162063190,190018001,110034,ERX8620332,ERS10857220,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94983,,0.13248,,0.6565,,0.47977,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10426,ERR9077189,ERX8620332,ERS10857220,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO6S12,SAMEA13254177,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254177|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO6S12|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO6S12|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO6S12 s,Sv2aHO6S12 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO6S12L004-1.fastq.gz,fastq,686469910.0,9089431.0,E MTAB 11505:sv2aHO6S12L004,0:75.52 1:0,A:169287189;C:163276361;G:162844724;T:190954218;N:107418,75,0,,,169287189,163276361,162844724,190954218,107418,ERX8620332,ERS10857220,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95061,,0.13029,,0.65389,,0.48044,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10427,ERR9077182,ERX8620331,ERS10857219,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO4S10,SAMEA13254176,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254176|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO4S10|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO4S10|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO4S10 s,Sv2aHO4S10 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO4S10L001-1.fastq.gz,fastq,713858966.0,9452474.0,E MTAB 11505:sv2aHO4S10L001,0:75.52 1:0,A:177913695;C:169425317;G:167540012;T:198835532;N:144410,75,0,,,177913695,169425317,167540012,198835532,144410,ERX8620331,ERS10857219,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94848,,0.12981,,0.6636,,0.47772,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10428,ERR9077183,ERX8620331,ERS10857219,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO4S10,SAMEA13254176,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254176|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO4S10|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO4S10|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO4S10 s,Sv2aHO4S10 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO4S10L002-1.fastq.gz,fastq,717619593.0,9502301.0,E MTAB 11505:sv2aHO4S10L002,0:75.52 1:0,A:178830542;C:170284720;G:168594514;T:199773382;N:136435,75,0,,,178830542,170284720,168594514,199773382,136435,ERX8620331,ERS10857219,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94812,,0.12868,,0.6645,,0.47281,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10429,ERR9077184,ERX8620331,ERS10857219,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO4S10,SAMEA13254176,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254176|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO4S10|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO4S10|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO4S10 s,Sv2aHO4S10 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO4S10L003-1.fastq.gz,fastq,727263626.0,9629858.0,E MTAB 11505:sv2aHO4S10L003,0:75.52 1:0,A:181201278;C:172619520;G:170780953;T:202550397;N:111478,75,0,,,181201278,172619520,170780953,202550397,111478,ERX8620331,ERS10857219,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94768,,0.12827,,0.66596,,0.47332,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10430,ERR9077185,ERX8620331,ERS10857219,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO4S10,SAMEA13254176,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254176|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO4S10|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO4S10|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO4S10 s,Sv2aHO4S10 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO4S10L004-1.fastq.gz,fastq,736595278.0,9753337.0,E MTAB 11505:sv2aHO4S10L004,0:75.52 1:0,A:183510872;C:174806534;G:173027794;T:205140640;N:109438,75,0,,,183510872,174806534,173027794,205140640,109438,ERX8620331,ERS10857219,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94925,,0.12904,,0.66417,,0.47297,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10431,ERR9077178,ERX8620330,ERS10857218,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO3S6,SAMEA13254175,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254175|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO3S6|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO3S6|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO3S6 s,Sv2aHO3S6 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO3S6L001-1.fastq.gz,fastq,710756305.0,9410862.0,E MTAB 11505:sv2aHO3S6L001,0:75.53 1:0,A:175585613;C:170261120;G:166658917;T:198106388;N:144267,75,0,,,175585613,170261120,166658917,198106388,144267,ERX8620330,ERS10857218,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94827,,0.14002,,0.66785,,0.474,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10432,ERR9077179,ERX8620330,ERS10857218,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO3S6,SAMEA13254175,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254175|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO3S6|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO3S6|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO3S6 s,Sv2aHO3S6 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO3S6L002-1.fastq.gz,fastq,715330324.0,9471415.0,E MTAB 11505:sv2aHO3S6L002,0:75.53 1:0,A:176679775;C:171311031;G:167903237;T:199299483;N:136798,75,0,,,176679775,171311031,167903237,199299483,136798,ERX8620330,ERS10857218,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.9469,,0.13915,,0.67004,,0.47654,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10433,ERR9077180,ERX8620330,ERS10857218,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO3S6,SAMEA13254175,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254175|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO3S6|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO3S6|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO3S6 s,Sv2aHO3S6 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO3S6L003-1.fastq.gz,fastq,722810562.0,9570364.0,E MTAB 11505:sv2aHO3S6L003,0:75.53 1:0,A:178442845;C:173192786;G:169595085;T:201465522;N:114324,75,0,,,178442845,173192786,169595085,201465522,114324,ERX8620330,ERS10857218,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94918,,0.13979,,0.66902,,0.47572,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10434,ERR9077181,ERX8620330,ERS10857218,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHO3S6,SAMEA13254175,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254175|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHO3S6|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a / |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHO3S6|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHO3S6 s,Sv2aHO3S6 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a / ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHO3S6L004-1.fastq.gz,fastq,732990507.0,9705054.0,E MTAB 11505:sv2aHO3S6L004,0:75.53 1:0,A:180951130;C:175567778;G:172037542;T:204323488;N:110569,75,0,,,180951130,175567778,172037542,204323488,110569,ERX8620330,ERS10857218,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.94812,,0.13893,,0.67085,,0.47502,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10435,ERR9077174,ERX8620329,ERS10857217,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET7S9,SAMEA13254174,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254174|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET7S9|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET7S9|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET7S9 s,Sv2aHET7S9 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET7S9L001-1.fastq.gz,fastq,773209432.0,10238087.0,E MTAB 11505:sv2aHET7S9L001,0:75.52 1:0,A:191962953;C:184699376;G:180774008;T:215620759;N:152336,75,0,,,191962953,184699376,180774008,215620759,152336,ERX8620329,ERS10857217,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95047,,0.12485,,0.65705,,0.4775,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10436,ERR9077175,ERX8620329,ERS10857217,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET7S9,SAMEA13254174,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254174|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET7S9|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET7S9|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET7S9 s,Sv2aHET7S9 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET7S9L002-1.fastq.gz,fastq,773106152.0,10236677.0,E MTAB 11505:sv2aHET7S9L002,0:75.52 1:0,A:191812833;C:184676419;G:180997547;T:215473732;N:145621,75,0,,,191812833,184676419,180997547,215473732,145621,ERX8620329,ERS10857217,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95016,,0.12464,,0.65482,,0.47419,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10437,ERR9077176,ERX8620329,ERS10857217,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET7S9,SAMEA13254174,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254174|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET7S9|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET7S9|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET7S9 s,Sv2aHET7S9 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET7S9L003-1.fastq.gz,fastq,783061051.0,10368445.0,E MTAB 11505:sv2aHET7S9L003,0:75.52 1:0,A:194289152;C:187108364;G:183177036;T:218370500;N:115999,75,0,,,194289152,187108364,183177036,218370500,115999,ERX8620329,ERS10857217,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95172,,0.12488,,0.65445,,0.48157,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10438,ERR9077177,ERX8620329,ERS10857217,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET7S9,SAMEA13254174,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254174|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET7S9|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET7S9|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET7S9 s,Sv2aHET7S9 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET7S9L004-1.fastq.gz,fastq,790150025.0,10462214.0,E MTAB 11505:sv2aHET7S9L004,0:75.52 1:0,A:196056500;C:188746833;G:184927588;T:220305922;N:113182,75,0,,,196056500,188746833,184927588,220305922,113182,ERX8620329,ERS10857217,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95285,,0.12478,,0.65551,,0.4763,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10439,ERR9077170,ERX8620328,ERS10857216,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET4S5,SAMEA13254173,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254173|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET4S5|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET4S5|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET4S5 s,Sv2aHET4S5 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET4S5L001-1.fastq.gz,fastq,685650097.0,9076481.0,E MTAB 11505:sv2aHET4S5L001,0:75.54 1:0,A:161812875;C:167870520;G:166985310;T:188850530;N:130862,75,0,,,161812875,167870520,166985310,188850530,130862,ERX8620328,ERS10857216,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95733,,0.09974,,0.65691,,0.47392,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10440,ERR9077171,ERX8620328,ERS10857216,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET4S5,SAMEA13254173,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254173|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET4S5|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET4S5|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET4S5 s,Sv2aHET4S5 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET4S5L002-1.fastq.gz,fastq,684402241.0,9059974.0,E MTAB 11505:sv2aHET4S5L002,0:75.54 1:0,A:161493428;C:167520248;G:166882054;T:188383816;N:122695,75,0,,,161493428,167520248,166882054,188383816,122695,ERX8620328,ERS10857216,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95537,,0.09915,,0.65719,,0.48261,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10441,ERR9077172,ERX8620328,ERS10857216,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET4S5,SAMEA13254173,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254173|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET4S5|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET4S5|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET4S5 s,Sv2aHET4S5 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET4S5L003-1.fastq.gz,fastq,694099126.0,9188245.0,E MTAB 11505:sv2aHET4S5L003,0:75.54 1:0,A:163727378;C:169989210;G:169143224;T:191137588;N:101726,75,0,,,163727378,169989210,169143224,191137588,101726,ERX8620328,ERS10857216,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95629,,0.09861,,0.65705,,0.47187,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10442,ERR9077173,ERX8620328,ERS10857216,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET4S5,SAMEA13254173,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254173|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET4S5|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET4S5|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET4S5 s,Sv2aHET4S5 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET4S5L004-1.fastq.gz,fastq,698753836.0,9249820.0,E MTAB 11505:sv2aHET4S5L004,0:75.54 1:0,A:164809473;C:171057633;G:170349692;T:192441413;N:95625,75,0,,,164809473,171057633,170349692,192441413,95625,ERX8620328,ERS10857216,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95613,,0.09885,,0.65798,,0.47227,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10443,ERR9077166,ERX8620327,ERS10857215,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET3S4,SAMEA13254172,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254172|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET3S4|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET3S4|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET3S4 s,Sv2aHET3S4 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET3S4L001-1.fastq.gz,fastq,691298605.0,9151512.0,E MTAB 11505:sv2aHET3S4L001,0:75.54 1:0,A:164743919;C:170752099;G:164763621;T:190912044;N:126922,75,0,,,164743919,170752099,164763621,190912044,126922,ERX8620327,ERS10857215,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95684,,0.09604,,0.6603,,0.47285,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10444,ERR9077167,ERX8620327,ERS10857215,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET3S4,SAMEA13254172,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254172|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET3S4|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET3S4|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET3S4 s,Sv2aHET3S4 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET3S4L002-1.fastq.gz,fastq,694080975.0,9188259.0,E MTAB 11505:sv2aHET3S4L002,0:75.54 1:0,A:165336810;C:171397273;G:165632321;T:191591872;N:122699,75,0,,,165336810,171397273,165632321,191591872,122699,ERX8620327,ERS10857215,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95612,,0.09694,,0.65993,,0.46918,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10445,ERR9077168,ERX8620327,ERS10857215,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET3S4,SAMEA13254172,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254172|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET3S4|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET3S4|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET3S4 s,Sv2aHET3S4 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET3S4L003-1.fastq.gz,fastq,703689889.0,9315387.0,E MTAB 11505:sv2aHET3S4L003,0:75.54 1:0,A:167575230;C:173881977;G:167845574;T:194289403;N:97705,75,0,,,167575230,173881977,167845574,194289403,97705,ERX8620327,ERS10857215,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.9577,,0.09608,,0.66042,,0.47022,,74,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10446,ERR9077169,ERX8620327,ERS10857215,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET3S4,SAMEA13254172,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254172|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET3S4|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET3S4|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET3S4 s,Sv2aHET3S4 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET3S4L004-1.fastq.gz,fastq,712116538.0,9426961.0,E MTAB 11505:sv2aHET3S4L004,0:75.54 1:0,A:169598596;C:175885948;G:169866534;T:196669400;N:96060,75,0,,,169598596,175885948,169866534,196669400,96060,ERX8620327,ERS10857215,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95734,,0.09716,,0.66054,,0.47257,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10447,ERR9077162,ERX8620326,ERS10857214,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET2S3,SAMEA13254171,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254171|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET2S3|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET2S3|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET2S3 s,Sv2aHET2S3 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET2S3L001-1.fastq.gz,fastq,733440522.0,9709422.0,E MTAB 11505:sv2aHET2S3L001,0:75.54 1:0,A:173670000;C:181175353;G:175392793;T:203059256;N:143120,75,0,,,173670000,181175353,175392793,203059256,143120,ERX8620326,ERS10857214,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95885,,0.08758,,0.65393,,0.47249,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10448,ERR9077163,ERX8620326,ERS10857214,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET2S3,SAMEA13254171,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254171|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET2S3|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET2S3|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET2S3 s,Sv2aHET2S3 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET2S3L002-1.fastq.gz,fastq,732121929.0,9691967.0,E MTAB 11505:sv2aHET2S3L002,0:75.54 1:0,A:173332091;C:180805738;G:175271736;T:202574727;N:137637,75,0,,,173332091,180805738,175271736,202574727,137637,ERX8620326,ERS10857214,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95775,,0.08879,,0.6564,,0.4718,,76,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10449,ERR9077164,ERX8620326,ERS10857214,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET2S3,SAMEA13254171,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254171|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET2S3|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET2S3|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET2S3 s,Sv2aHET2S3 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET2S3L003-1.fastq.gz,fastq,743488189.0,9842286.0,E MTAB 11505:sv2aHET2S3L003,0:75.54 1:0,A:175979238;C:183726319;G:177933958;T:205735955;N:112719,75,0,,,175979238,183726319,177933958,205735955,112719,ERX8620326,ERS10857214,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.9593,,0.08716,,0.65437,,0.46976,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System 10450,ERR9077165,ERX8620326,ERS10857214,ERP135966,PRJEB51339,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E-MTAB-11505,Transcriptome Analysis,Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,,Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Sv2aHET2S3,SAMEA13254171,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg",ENA first public:2022 04 21|ENA last update:2022 04 21|External Id:SAMEA13254171|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg|INSDC first public:2022 04 21T00:32:07Z|INSDC last update:2022 04 21T00:32:07Z|INSDC status:public|Submitter Id:E MTAB 11505:Sv2aHET2S3|age:6|broker name:ArrayExpress|common name:zebrafish|developmental stage:larval stage|genotype:sv2a+/ |individual:pool of 10 heads|organism part:head|sample name:E MTAB 11505:Sv2aHET2S3|sex:not available|strain:AB,,,,,,,,,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,E MTAB 11505:Sv2aHET2S3 s,Sv2aHET2S3 s,RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.,Experimental Factor: genotype:sv2a+/ ,RNA-Seq,TRANSCRIPTOMIC,PolyA,SINGLE,ILLUMINA,NextSeq 500,,ERP135966,NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae,ENA FIRST PUBLIC:2022 04 21|ENA LAST UPDATE:2022 04 21,sv2aHET2S3L004-1.fastq.gz,fastq,747723481.0,9898304.0,E MTAB 11505:sv2aHET2S3L004,0:75.54 1:0,A:176935451;C:184684782;G:179046040;T:206946124;N:111084,75,0,,,176935451,184684782,179046040,206946124,111084,ERX8620326,ERS10857214,ERA9644804,"Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive","Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg|European Nucleotide Archive",1,0.95934,,0.08676,,0.65533,,0.47523,,75,,B,,usable mapping rate,illumina,nextseq,unknown,poly_a,trueseq,bulk,unknown,unknown,,Belgium,2022-04-21,Larval,Larval,Head,Nervous System