rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
59889,SRR12070806,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04362A_S29_L001_R1_001.fastq.gz BS04362A_S29_L001_R2_001.fastq.gz,fastq fastq,1579857636.0,18807829.0,GSM4632822 r1,0:28 1:56,A:422473235;C:368142865;G:381571095;T:407185430;N:485011,28,56,,,422473235,368142865,381571095,407185430,485011,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00645,0.95173,0.00124,0.07241,0.98658,0.82321,0.37638,0.50111,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59890,SRR12070807,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04365A_S32_L001_R1_001.fastq.gz BS04365A_S32_L001_R2_001.fastq.gz,fastq fastq,1323460488.0,15755482.0,GSM4632822 r10,0:28 1:56,A:354343773;C:308387222;G:319154360;T:341159378;N:415755,28,56,,,354343773,308387222,319154360,341159378,415755,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00656,0.95277,0.00125,0.07333,0.98648,0.82173,0.33933,0.49364,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59891,SRR12070808,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04365A_S32_L002_R1_001.fastq.gz BS04365A_S32_L002_R2_001.fastq.gz,fastq fastq,1285524408.0,15303862.0,GSM4632822 r11,0:28 1:56,A:344281208;C:299815192;G:310290587;T:331125346;N:12075,28,56,,,344281208,299815192,310290587,331125346,12075,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00629,0.95211,0.00131,0.07134,0.98715,0.82183,0.35381,0.50402,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59892,SRR12070809,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04365A_S32_L003_R1_001.fastq.gz BS04365A_S32_L003_R2_001.fastq.gz,fastq fastq,1224628188.0,14578907.0,GSM4632822 r12,0:28 1:56,A:327652897;C:285496906;G:295614924;T:315603941;N:259520,28,56,,,327652897,285496906,295614924,315603941,259520,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00626,0.95298,0.00116,0.07345,0.98701,0.82189,0.37759,0.50495,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59893,SRR12070810,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04362A_S29_L002_R1_001.fastq.gz BS04362A_S29_L002_R2_001.fastq.gz,fastq fastq,1533107268.0,18251277.0,GSM4632822 r2,0:28 1:56,A:410143735;C:357544615;G:370575788;T:394828238;N:14892,28,56,,,410143735,357544615,370575788,394828238,14892,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00654,0.95294,0.00142,0.07325,0.98646,0.8227,0.37757,0.50908,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59894,SRR12070811,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04362A_S29_L003_R1_001.fastq.gz BS04362A_S29_L003_R2_001.fastq.gz,fastq fastq,1463186928.0,17418892.0,GSM4632822 r3,0:28 1:56,A:391051845;C:341095211;G:353736569;T:376988684;N:314619,28,56,,,391051845,341095211,353736569,376988684,314619,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00629,0.95283,0.00126,0.07184,0.98707,0.82142,0.35436,0.49597,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59895,SRR12070812,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04363A_S30_L001_R1_001.fastq.gz BS04363A_S30_L001_R2_001.fastq.gz,fastq fastq,1530433632.0,18219448.0,GSM4632822 r4,0:28 1:56,A:409421761;C:356783449;G:369293756;T:394446713;N:487953,28,56,,,409421761,356783449,369293756,394446713,487953,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00629,0.95196,0.00127,0.07372,0.98685,0.82118,0.38713,0.50626,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59896,SRR12070813,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04363A_S30_L002_R1_001.fastq.gz BS04363A_S30_L002_R2_001.fastq.gz,fastq fastq,1487645880.0,17710070.0,GSM4632822 r5,0:28 1:56,A:398049512;C:347141056;G:359315599;T:383125267;N:14446,28,56,,,398049512,347141056,359315599,383125267,14446,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00645,0.9526,0.00139,0.07292,0.98683,0.82306,0.36544,0.49888,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59897,SRR12070814,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04363A_S30_L003_R1_001.fastq.gz BS04363A_S30_L003_R2_001.fastq.gz,fastq fastq,1419765816.0,16901974.0,GSM4632822 r6,0:28 1:56,A:379570290;C:331081061;G:342937072;T:365872250;N:305143,28,56,,,379570290,331081061,342937072,365872250,305143,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00639,0.95258,0.00131,0.07211,0.98656,0.82215,0.36183,0.50028,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59898,SRR12070815,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04364A_S31_L001_R1_001.fastq.gz BS04364A_S31_L001_R2_001.fastq.gz,fastq fastq,1219258740.0,14514985.0,GSM4632822 r7,0:28 1:56,A:326040885;C:284148488;G:294324187;T:314369331;N:375849,28,56,,,326040885,284148488,294324187,314369331,375849,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00638,0.95299,0.00132,0.07368,0.98703,0.82217,0.39125,0.50058,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59899,SRR12070816,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04364A_S31_L002_R1_001.fastq.gz BS04364A_S31_L002_R2_001.fastq.gz,fastq fastq,1182878256.0,14081884.0,GSM4632822 r8,0:28 1:56,A:316450660;C:275888706;G:285809088;T:304718502;N:11300,28,56,,,316450660,275888706,285809088,304718502,11300,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00625,0.95248,0.0014,0.07181,0.98713,0.82134,0.37513,0.49645,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59900,SRR12070817,SRX8598391,SRS6888926,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCulturePRO C PRO,GSM4632822,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroCoCulturePRO C PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632822,GSM4632822: InVitroCoCulturePRO C PRO; Danio rerio; RNA Seq,GSM4632822,,1,none provided by the submitter,GEO Accession:GSM4632822,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04364A_S31_L003_R1_001.fastq.gz BS04364A_S31_L003_R2_001.fastq.gz,fastq fastq,1129913400.0,13451350.0,GSM4632822 r9,0:28 1:56,A:301996525;C:263392969;G:273021225;T:291256999;N:245682,28,56,,,301996525,263392969,273021225,291256999,245682,SRX8598391,SRS6888926,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00663,0.95254,0.00123,0.07336,0.98608,0.82004,0.35116,0.48635,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59901,SRR12070794,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04358A_S25_L001_R1_001.fastq.gz BS04358A_S25_L001_R2_001.fastq.gz,fastq fastq,1524569508.0,18149637.0,GSM4632821 r1,0:28 1:56,A:408872899;C:351795969;G:368934874;T:394493201;N:472565,28,56,,,408872899,351795969,368934874,394493201,472565,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00744,0.94994,0.00129,0.08045,0.98462,0.82319,0.37339,0.51461,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59902,SRR12070795,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04361A_S28_L001_R2_001.fastq.gz BS04361A_S28_L001_R1_001.fastq.gz,fastq fastq,1690196760.0,20121390.0,GSM4632821 r10,0:28 1:56,A:454287482;C:390312456;G:407429482;T:437648802;N:518538,28,56,,,454287482,390312456,407429482,437648802,518538,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00704,0.94869,0.00138,0.08006,0.98557,0.81931,0.33489,0.51357,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59903,SRR12070796,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04361A_S28_L002_R1_001.fastq.gz BS04361A_S28_L002_R2_001.fastq.gz,fastq fastq,1795932264.0,21380146.0,GSM4632821 r11,0:28 1:56,A:482804698;C:415062383;G:433390959;T:464657330;N:16894,28,56,,,482804698,415062383,433390959,464657330,16894,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00718,0.94935,0.00153,0.08163,0.98593,0.81826,0.38619,0.52157,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59904,SRR12070797,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04361A_S28_L003_R1_001.fastq.gz BS04361A_S28_L003_R2_001.fastq.gz,fastq fastq,1892563848.0,22530522.0,GSM4632821 r12,0:28 1:56,A:508280818;C:437173444;G:456747533;T:489955912;N:406141,28,56,,,508280818,437173444,456747533,489955912,406141,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00714,0.94822,0.00147,0.08202,0.98604,0.81813,0.37383,0.52358,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59905,SRR12070798,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04358A_S25_L002_R1_001.fastq.gz BS04358A_S25_L002_R2_001.fastq.gz,fastq fastq,1620727500.0,19294375.0,GSM4632821 r2,0:28 1:56,A:434872284;C:374329924;G:392494566;T:419015123;N:15603,28,56,,,434872284,374329924,392494566,419015123,15603,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00725,0.94994,0.00147,0.08019,0.98526,0.82235,0.36098,0.50775,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59906,SRR12070799,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04358A_S25_L003_R1_001.fastq.gz BS04358A_S25_L003_R2_001.fastq.gz,fastq fastq,1707889176.0,20332014.0,GSM4632821 r3,0:28 1:56,A:457493127;C:394310250;G:414010722;T:441707569;N:367508,28,56,,,457493127,394310250,414010722,441707569,367508,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00739,0.94805,0.00142,0.08043,0.98476,0.82355,0.36507,0.51796,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59907,SRR12070800,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04359A_S26_L001_R1_001.fastq.gz BS04359A_S26_L001_R2_001.fastq.gz,fastq fastq,621574044.0,7399691.0,GSM4632821 r4,0:28 1:56,A:166982801;C:143376447;G:149992097;T:161032566;N:190133,28,56,,,166982801,143376447,149992097,161032566,190133,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.0076,0.94817,0.00144,0.08179,0.98395,0.81826,0.37372,0.52016,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59908,SRR12070801,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04359A_S26_L002_R1_001.fastq.gz BS04359A_S26_L002_R2_001.fastq.gz,fastq fastq,662213496.0,7883494.0,GSM4632821 r5,0:28 1:56,A:177919580;C:152869460;G:160002591;T:171415507;N:6358,28,56,,,177919580,152869460,160002591,171415507,6358,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00778,0.9485,0.00143,0.08078,0.98397,0.81738,0.3502,0.52197,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59909,SRR12070802,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04359A_S26_L003_R1_001.fastq.gz BS04359A_S26_L003_R2_001.fastq.gz,fastq fastq,697259724.0,8300711.0,GSM4632821 r6,0:28 1:56,A:187156912;C:160903609;G:168487260;T:180561890;N:150053,28,56,,,187156912,160903609,168487260,180561890,150053,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00766,0.94826,0.00146,0.08162,0.98376,0.8182,0.35423,0.50979,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59910,SRR12070803,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04360A_S27_L001_R2_001.fastq.gz BS04360A_S27_L001_R1_001.fastq.gz,fastq fastq,1449515844.0,17256141.0,GSM4632821 r7,0:28 1:56,A:389528657;C:334742369;G:349530306;T:375261829;N:452683,28,56,,,389528657,334742369,349530306,375261829,452683,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00716,0.94811,0.00153,0.07996,0.98557,0.8187,0.3443,0.5102,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59911,SRR12070804,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04360A_S27_L002_R1_001.fastq.gz BS04360A_S27_L002_R2_001.fastq.gz,fastq fastq,1538935860.0,18320665.0,GSM4632821 r8,0:28 1:56,A:413673427;C:355685179;G:371456154;T:398106546;N:14554,28,56,,,413673427,355685179,371456154,398106546,14554,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00719,0.94834,0.00137,0.08021,0.9852,0.81897,0.375,0.51941,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59912,SRR12070805,SRX8598390,SRS6888925,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroCoCultureINV C INV,GSM4632821,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroCoCultureINV C INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632821,GSM4632821: InVitroCoCultureINV C INV; Danio rerio; RNA Seq,GSM4632821,,1,none provided by the submitter,GEO Accession:GSM4632821,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04360A_S27_L003_R1_001.fastq.gz BS04360A_S27_L003_R2_001.fastq.gz,fastq fastq,1621177740.0,19299735.0,GSM4632821 r9,0:28 1:56,A:435378400;C:374524726;G:391279336;T:419638571;N:356707,28,56,,,435378400,374524726,391279336,419638571,356707,SRX8598390,SRS6888925,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00735,0.94865,0.00146,0.08182,0.98508,0.81684,0.36371,0.51483,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59913,SRR12070782,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04354A_S21_L001_R2_001.fastq.gz BS04354A_S21_L001_R1_001.fastq.gz,fastq fastq,1256812620.0,14962055.0,GSM4632820 r1,0:28 1:56,A:335747323;C:292900864;G:303643109;T:324134543;N:386781,28,56,,,335747323,292900864,303643109,324134543,386781,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00634,0.95385,0.00131,0.06509,0.98709,0.82231,0.39766,0.51478,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59914,SRR12070783,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04357A_S24_L001_R1_001.fastq.gz BS04357A_S24_L001_R2_001.fastq.gz,fastq fastq,1148675556.0,13674709.0,GSM4632820 r10,0:28 1:56,A:307041391;C:267732764;G:277379931;T:296167955;N:353515,28,56,,,307041391,267732764,277379931,296167955,353515,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00613,0.95338,0.00112,0.06474,0.98697,0.8227,0.3421,0.50778,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59915,SRR12070784,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04357A_S24_L002_R1_001.fastq.gz BS04357A_S24_L002_R2_001.fastq.gz,fastq fastq,957642420.0,11400505.0,GSM4632820 r11,0:28 1:56,A:256206649;C:223228338;G:231370787;T:246827334;N:9312,28,56,,,256206649,223228338,231370787,246827334,9312,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00587,0.95324,0.00116,0.06501,0.98788,0.82191,0.35083,0.50388,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59916,SRR12070785,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04357A_S24_L003_R1_001.fastq.gz BS04357A_S24_L003_R2_001.fastq.gz,fastq fastq,994968912.0,11844868.0,GSM4632820 r12,0:28 1:56,A:265778881;C:232000678;G:240512969;T:256463128;N:213256,28,56,,,265778881,232000678,240512969,256463128,213256,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00592,0.95353,0.00107,0.06498,0.98683,0.82179,0.36511,0.51341,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59917,SRR12070786,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04354A_S21_L002_R1_001.fastq.gz BS04354A_S21_L002_R2_001.fastq.gz,fastq fastq,1041891648.0,12403472.0,GSM4632820 r2,0:28 1:56,A:278467899;C:242826287;G:251914761;T:268672776;N:9925,28,56,,,278467899,242826287,251914761,268672776,9925,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00575,0.95323,0.00099,0.06608,0.98733,0.82408,0.34917,0.48965,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59918,SRR12070787,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04354A_S21_L003_R1_001.fastq.gz BS04354A_S21_L003_R2_001.fastq.gz,fastq fastq,1082649792.0,12888688.0,GSM4632820 r3,0:28 1:56,A:289047609;C:252352024;G:261848398;T:279164218;N:237543,28,56,,,289047609,252352024,261848398,279164218,237543,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00599,0.95383,0.00107,0.06488,0.98687,0.82098,0.3738,0.50057,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59919,SRR12070788,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04355A_S22_L001_R1_001.fastq.gz BS04355A_S22_L001_R2_001.fastq.gz,fastq fastq,1344936684.0,16011151.0,GSM4632820 r4,0:28 1:56,A:359370353;C:313441996;G:324922277;T:346791015;N:411043,28,56,,,359370353,313441996,324922277,346791015,411043,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00563,0.95345,0.001,0.06635,0.9876,0.8239,0.34846,0.51394,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59920,SRR12070789,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04355A_S22_L002_R1_001.fastq.gz BS04355A_S22_L002_R2_001.fastq.gz,fastq fastq,1116219636.0,13288329.0,GSM4632820 r5,0:28 1:56,A:298439978;C:260165860;G:269822276;T:287780911;N:10611,28,56,,,298439978,260165860,269822276,287780911,10611,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00557,0.95329,0.00099,0.06493,0.98786,0.82296,0.34948,0.50913,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59921,SRR12070790,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04355A_S22_L003_R1_001.fastq.gz BS04355A_S22_L003_R2_001.fastq.gz,fastq fastq,1160743920.0,13818380.0,GSM4632820 r6,0:28 1:56,A:309970093;C:270593614;G:280697217;T:299232158;N:250838,28,56,,,309970093,270593614,280697217,299232158,250838,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.0058,0.95324,0.00103,0.06452,0.98764,0.82246,0.37111,0.52325,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59922,SRR12070791,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04356A_S23_L001_R1_001.fastq.gz BS04356A_S23_L001_R2_001.fastq.gz,fastq fastq,1154734560.0,13746840.0,GSM4632820 r7,0:28 1:56,A:308556171;C:269230539;G:278861275;T:297735114;N:351461,28,56,,,308556171,269230539,278861275,297735114,351461,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00598,0.95422,0.00117,0.06511,0.98746,0.82217,0.38992,0.50029,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59923,SRR12070792,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04356A_S23_L002_R1_001.fastq.gz BS04356A_S23_L002_R2_001.fastq.gz,fastq fastq,958877724.0,11415211.0,GSM4632820 r8,0:28 1:56,A:256447008;C:223575305;G:231691520;T:247154779;N:9112,28,56,,,256447008,223575305,231691520,247154779,9112,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00601,0.95306,0.0011,0.06426,0.98729,0.82296,0.33476,0.49603,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59924,SRR12070793,SRX8598389,SRS6888924,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroPRO D PRO,GSM4632820,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVitroPRO D PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632820,GSM4632820: InVitroPRO D PRO; Danio rerio; RNA Seq,GSM4632820,,1,none provided by the submitter,GEO Accession:GSM4632820,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04356A_S23_L003_R1_001.fastq.gz BS04356A_S23_L003_R2_001.fastq.gz,fastq fastq,997137456.0,11870684.0,GSM4632820 r9,0:28 1:56,A:266315696;C:232527481;G:241032207;T:257048258;N:213814,28,56,,,266315696,232527481,241032207,257048258,213814,SRX8598389,SRS6888924,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00574,0.95316,0.00095,0.06466,0.98737,0.82104,0.36563,0.50938,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59925,SRR12070770,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04350A_S17_L001_R1_001.fastq.gz BS04350A_S17_L001_R2_001.fastq.gz,fastq fastq,1383742248.0,16473122.0,GSM4632819 r1,0:28 1:56,A:371667201;C:318242128;G:333375123;T:360029202;N:428594,28,56,,,371667201,318242128,333375123,360029202,428594,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00672,0.95069,0.0013,0.07785,0.98675,0.81876,0.38349,0.50829,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59926,SRR12070771,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04353A_S20_L001_R1_001.fastq.gz BS04353A_S20_L001_R2_001.fastq.gz,fastq fastq,1451458176.0,17279264.0,GSM4632819 r10,0:28 1:56,A:389803103;C:333822621;G:349517233;T:377872774;N:442445,28,56,,,389803103,333822621,349517233,377872774,442445,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00693,0.95083,0.00122,0.07875,0.98533,0.81945,0.3919,0.50674,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59927,SRR12070772,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04353A_S20_L002_R1_001.fastq.gz BS04353A_S20_L002_R2_001.fastq.gz,fastq fastq,1427640312.0,16995718.0,GSM4632819 r11,0:28 1:56,A:383531956;C:328592043;G:344143391;T:371359317;N:13605,28,56,,,383531956,328592043,344143391,371359317,13605,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00667,0.95197,0.0013,0.07682,0.98632,0.8188,0.40904,0.51027,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59928,SRR12070773,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04353A_S20_L003_R1_001.fastq.gz BS04353A_S20_L003_R2_001.fastq.gz,fastq fastq,1401692796.0,16686819.0,GSM4632819 r12,0:28 1:56,A:376224957;C:322460526;G:337913300;T:364796386;N:297627,28,56,,,376224957,322460526,337913300,364796386,297627,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00691,0.95011,0.00144,0.07728,0.98626,0.8184,0.40869,0.50687,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59929,SRR12070774,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04350A_S17_L002_R1_001.fastq.gz BS04350A_S17_L002_R2_001.fastq.gz,fastq fastq,1363157628.0,16228067.0,GSM4632819 r2,0:28 1:56,A:366236085;C:313819303;G:328691083;T:354398313;N:12844,28,56,,,366236085,313819303,328691083,354398313,12844,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00704,0.9514,0.00143,0.07749,0.98608,0.81949,0.39134,0.50099,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59930,SRR12070775,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04350A_S17_L003_R1_001.fastq.gz BS04350A_S17_L003_R2_001.fastq.gz,fastq fastq,1340033352.0,15952778.0,GSM4632819 r3,0:28 1:56,A:359680921;C:308306305;G:323239582;T:348516416;N:290128,28,56,,,359680921,308306305,323239582,348516416,290128,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00704,0.95149,0.00151,0.07753,0.98648,0.81927,0.39599,0.51098,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59931,SRR12070776,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04351A_S18_L001_R1_001.fastq.gz BS04351A_S18_L001_R2_001.fastq.gz,fastq fastq,1248643704.0,14864806.0,GSM4632819 r4,0:28 1:56,A:335320084;C:287224572;G:300701738;T:325005886;N:391424,28,56,,,335320084,287224572,300701738,325005886,391424,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00695,0.95173,0.0015,0.07856,0.98636,0.82,0.40464,0.51463,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59932,SRR12070777,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04351A_S18_L002_R1_001.fastq.gz BS04351A_S18_L002_R2_001.fastq.gz,fastq fastq,1231462428.0,14660267.0,GSM4632819 r5,0:28 1:56,A:330850282;C:283524930;G:296869716;T:320205856;N:11644,28,56,,,330850282,283524930,296869716,320205856,11644,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00717,0.9511,0.00144,0.07683,0.98606,0.81769,0.40165,0.51431,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59933,SRR12070778,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04351A_S18_L003_R1_001.fastq.gz BS04351A_S18_L003_R2_001.fastq.gz,fastq fastq,1208684904.0,14389106.0,GSM4632819 r6,0:28 1:56,A:324389482;C:278119068;G:291440436;T:314475340;N:260578,28,56,,,324389482,278119068,291440436,314475340,260578,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00695,0.95118,0.00133,0.07732,0.98606,0.81736,0.39491,0.50864,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59934,SRR12070779,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04352A_S19_L001_R1_001.fastq.gz BS04352A_S19_L001_R2_001.fastq.gz,fastq fastq,1207258332.0,14372123.0,GSM4632819 r7,0:28 1:56,A:324383737;C:277720633;G:290659950;T:314123927;N:370085,28,56,,,324383737,277720633,290659950,314123927,370085,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00692,0.95048,0.00135,0.0771,0.98622,0.82006,0.40075,0.5034,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59935,SRR12070780,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04352A_S19_L002_R1_001.fastq.gz BS04352A_S19_L002_R2_001.fastq.gz,fastq fastq,1190747292.0,14175563.0,GSM4632819 r8,0:28 1:56,A:320138498;C:274128294;G:286932733;T:309536552;N:11215,28,56,,,320138498,274128294,286932733,309536552,11215,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00689,0.95128,0.00129,0.07706,0.98606,0.81945,0.40525,0.50765,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59936,SRR12070781,SRX8598388,SRS6888923,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVitroINV D INV,GSM4632819,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVitroINV D INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632819,GSM4632819: InVitroINV D INV; Danio rerio; RNA Seq,GSM4632819,,1,none provided by the submitter,GEO Accession:GSM4632819,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04352A_S19_L003_R1_001.fastq.gz BS04352A_S19_L003_R2_001.fastq.gz,fastq fastq,1170365028.0,13932917.0,GSM4632819 r9,0:28 1:56,A:314265429;C:269311771;G:282105321;T:304428907;N:253600,28,56,,,314265429,269311771,282105321,304428907,253600,SRX8598388,SRS6888923,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00695,0.95127,0.00145,0.07825,0.98583,0.81893,0.37788,0.50569,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59937,SRR12070758,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04346A_S13_L001_R1_001.fastq.gz BS04346A_S13_L001_R2_001.fastq.gz,fastq fastq,1458705696.0,17365544.0,GSM4632818 r1,0:28 1:56,A:383365679;C:349805540;G:361240761;T:363849333;N:444383,28,56,,,383365679,349805540,361240761,363849333,444383,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00809,0.94963,0.00209,0.08412,0.98877,0.84118,0.3471,0.5023,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59938,SRR12070759,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04349A_S16_L001_R1_001.fastq.gz BS04349A_S16_L001_R2_001.fastq.gz,fastq fastq,1326508428.0,15791767.0,GSM4632818 r10,0:28 1:56,A:348519453;C:318084588;G:328712685;T:330789330;N:402372,28,56,,,348519453,318084588,328712685,330789330,402372,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00865,0.94936,0.00221,0.08463,0.98875,0.84269,0.33852,0.52081,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59939,SRR12070760,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04349A_S16_L002_R1_001.fastq.gz BS04349A_S16_L002_R2_001.fastq.gz,fastq fastq,1376950512.0,16392268.0,GSM4632818 r11,0:28 1:56,A:361862026;C:330399993;G:341452557;T:343223189;N:12747,28,56,,,361862026,330399993,341452557,343223189,12747,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00851,0.95035,0.00236,0.08362,0.98967,0.84331,0.35269,0.52127,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59940,SRR12070761,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04349A_S16_L003_R1_001.fastq.gz BS04349A_S16_L003_R2_001.fastq.gz,fastq fastq,1385353872.0,16492308.0,GSM4632818 r12,0:28 1:56,A:363751199;C:332233814;G:343582919;T:345492581;N:293359,28,56,,,363751199,332233814,343582919,345492581,293359,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00879,0.9488,0.00236,0.08284,0.98877,0.84064,0.34479,0.51296,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59941,SRR12070762,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04346A_S13_L002_R1_001.fastq.gz BS04346A_S13_L002_R2_001.fastq.gz,fastq fastq,1512039312.0,18000468.0,GSM4632818 r2,0:28 1:56,A:397403239;C:362809414;G:374830898;T:376981132;N:14629,28,56,,,397403239,362809414,374830898,376981132,14629,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00875,0.9491,0.00267,0.08388,0.98902,0.84187,0.35151,0.52115,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59942,SRR12070763,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04346A_S13_L003_R1_001.fastq.gz BS04346A_S13_L003_R2_001.fastq.gz,fastq fastq,1524782028.0,18152167.0,GSM4632818 r3,0:28 1:56,A:400510326;C:365687251;G:377953949;T:380302796;N:327706,28,56,,,400510326,365687251,377953949,380302796,327706,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00845,0.95001,0.00236,0.0836,0.98934,0.84058,0.34081,0.51081,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59943,SRR12070764,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04347A_S14_L001_R1_001.fastq.gz BS04347A_S14_L001_R2_001.fastq.gz,fastq fastq,1439001480.0,17130970.0,GSM4632818 r4,0:28 1:56,A:377937587;C:344932949;G:356806920;T:358882638;N:441386,28,56,,,377937587,344932949,356806920,358882638,441386,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00858,0.94865,0.00241,0.08439,0.9889,0.84277,0.3376,0.51764,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59944,SRR12070765,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04347A_S14_L002_R1_001.fastq.gz BS04347A_S14_L002_R2_001.fastq.gz,fastq fastq,1492546440.0,17768410.0,GSM4632818 r5,0:28 1:56,A:392057883;C:357969348;G:370453968;T:372050645;N:14596,28,56,,,392057883,357969348,370453968,372050645,14596,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.0083,0.94946,0.00245,0.08477,0.98959,0.84155,0.36021,0.52354,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59945,SRR12070766,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04347A_S14_L003_R1_001.fastq.gz BS04347A_S14_L003_R2_001.fastq.gz,fastq fastq,1509151560.0,17966090.0,GSM4632818 r6,0:28 1:56,A:396133632;C:361774643;G:374557410;T:376358393;N:327482,28,56,,,396133632,361774643,374557410,376358393,327482,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00856,0.94984,0.00235,0.08497,0.9892,0.84037,0.3415,0.51657,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59946,SRR12070767,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04348A_S15_L001_R2_001.fastq.gz BS04348A_S15_L001_R1_001.fastq.gz,fastq fastq,1442527464.0,17172946.0,GSM4632818 r7,0:28 1:56,A:378907948;C:345782645;G:357694740;T:359695634;N:446497,28,56,,,378907948,345782645,357694740,359695634,446497,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.0084,0.95004,0.00238,0.08439,0.98906,0.84082,0.35758,0.53144,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59947,SRR12070768,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04348A_S15_L002_R1_001.fastq.gz BS04348A_S15_L002_R2_001.fastq.gz,fastq fastq,1496781804.0,17818831.0,GSM4632818 r8,0:28 1:56,A:393260898;C:359049930;G:371448817;T:373008443;N:13716,28,56,,,393260898,359049930,371448817,373008443,13716,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.0082,0.95015,0.00243,0.08385,0.9894,0.84242,0.34397,0.49899,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59948,SRR12070769,SRX8598387,SRS6888922,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetPRO M PRO,GSM4632818,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoMetPRO M PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632818,GSM4632818: InVivoMetPRO M PRO; Danio rerio; RNA Seq,GSM4632818,,1,none provided by the submitter,GEO Accession:GSM4632818,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04348A_S15_L003_R1_001.fastq.gz BS04348A_S15_L003_R2_001.fastq.gz,fastq fastq,1510899432.0,17986898.0,GSM4632818 r9,0:28 1:56,A:396624530;C:362183847;G:375029448;T:376742853;N:318754,28,56,,,396624530,362183847,375029448,376742853,318754,SRX8598387,SRS6888922,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00836,0.94925,0.00235,0.08429,0.98928,0.84122,0.35039,0.52231,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59949,SRR12070746,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04342A_S9_L001_R1_001.fastq.gz BS04342A_S9_L001_R2_001.fastq.gz,fastq fastq,1520879304.0,18105706.0,GSM4632817 r1,0:28 1:56,A:402345015;C:356308703;G:369202595;T:392554008;N:468983,28,56,,,402345015,356308703,369202595,392554008,468983,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00778,0.93735,0.00289,0.11482,0.9922,0.8183,0.31675,0.50682,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59950,SRR12070747,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04345A_S12_L001_R1_001.fastq.gz BS04345A_S12_L001_R2_001.fastq.gz,fastq fastq,1672849584.0,19914876.0,GSM4632817 r10,0:28 1:56,A:442479833;C:391894003;G:406117249;T:431837196;N:521303,28,56,,,442479833,391894003,406117249,431837196,521303,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00804,0.93945,0.00284,0.1147,0.99125,0.82106,0.3168,0.48531,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59951,SRR12070748,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04345A_S12_L002_R1_001.fastq.gz BS04345A_S12_L002_R2_001.fastq.gz,fastq fastq,1803138456.0,21465934.0,GSM4632817 r11,0:28 1:56,A:476934688;C:422845095;G:438246027;T:465095468;N:17178,28,56,,,476934688,422845095,438246027,465095468,17178,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00764,0.93909,0.00268,0.11395,0.99137,0.82102,0.33968,0.5118,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59952,SRR12070749,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04345A_S12_L003_R1_001.fastq.gz BS04345A_S12_L003_R2_001.fastq.gz,fastq fastq,1599047268.0,19036277.0,GSM4632817 r12,0:28 1:56,A:422591738;C:374647507;G:388624247;T:412841282;N:342494,28,56,,,422591738,374647507,388624247,412841282,342494,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00792,0.93847,0.00277,0.11563,0.99176,0.82002,0.35096,0.50581,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59953,SRR12070750,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04342A_S9_L002_R1_001.fastq.gz BS04342A_S9_L002_R2_001.fastq.gz,fastq fastq,1637408220.0,19492955.0,GSM4632817 r2,0:28 1:56,A:433127114;C:383962557;G:397986381;T:422316484;N:15684,28,56,,,433127114,383962557,397986381,422316484,15684,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00767,0.93867,0.00253,0.11208,0.99111,0.81698,0.32753,0.50509,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59954,SRR12070751,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04342A_S9_L003_R2_001.fastq.gz BS04342A_S9_L003_R1_001.fastq.gz,fastq fastq,1454953500.0,17320875.0,GSM4632817 r3,0:28 1:56,A:384630086;C:340966807;G:353544305;T:375497751;N:314551,28,56,,,384630086,340966807,353544305,375497751,314551,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.0077,0.93759,0.00253,0.11302,0.99095,0.81822,0.29674,0.49459,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59955,SRR12070752,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04343A_S10_L001_R1_001.fastq.gz BS04343A_S10_L001_R2_001.fastq.gz,fastq fastq,1330683396.0,15841469.0,GSM4632817 r4,0:28 1:56,A:351527254;C:311574797;G:323813225;T:343363405;N:404715,28,56,,,351527254,311574797,323813225,343363405,404715,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00781,0.93894,0.00261,0.1119,0.99078,0.82309,0.31149,0.51425,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59956,SRR12070753,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04343A_S10_L002_R1_001.fastq.gz BS04343A_S10_L002_R2_001.fastq.gz,fastq fastq,1434882708.0,17081937.0,GSM4632817 r5,0:28 1:56,A:379181752;C:336282793;G:349499020;T:369905318;N:13825,28,56,,,379181752,336282793,349499020,369905318,13825,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00789,0.93984,0.00271,0.11269,0.99105,0.82256,0.28137,0.49977,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59957,SRR12070754,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04343A_S10_L003_R1_001.fastq.gz BS04343A_S10_L003_R2_001.fastq.gz,fastq fastq,1273958532.0,15166173.0,GSM4632817 r6,0:28 1:56,A:336271453;C:298381900;G:310426744;T:328605802;N:272633,28,56,,,336271453,298381900,310426744,328605802,272633,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00749,0.93963,0.00247,0.11162,0.99147,0.82463,0.33193,0.50844,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59958,SRR12070755,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04344A_S11_L001_R2_001.fastq.gz BS04344A_S11_L001_R1_001.fastq.gz,fastq fastq,1731535764.0,20613521.0,GSM4632817 r7,0:28 1:56,A:457782608;C:405667922;G:420736879;T:446815219;N:533136,28,56,,,457782608,405667922,420736879,446815219,533136,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00744,0.93716,0.00248,0.11446,0.99109,0.82022,0.33439,0.51744,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59959,SRR12070756,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04344A_S11_L002_R1_001.fastq.gz BS04344A_S11_L002_R2_001.fastq.gz,fastq fastq,1867377288.0,22230682.0,GSM4632817 r8,0:28 1:56,A:493763805;C:437884549;G:454178873;T:481532947;N:17114,28,56,,,493763805,437884549,454178873,481532947,17114,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00772,0.9391,0.00269,0.11476,0.99186,0.82073,0.31419,0.50848,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59960,SRR12070757,SRX8598386,SRS6888921,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoMetINV M INV,GSM4632817,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoMetINV M INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632817,GSM4632817: InVivoMetINV M INV; Danio rerio; RNA Seq,GSM4632817,,1,none provided by the submitter,GEO Accession:GSM4632817,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04344A_S11_L003_R1_001.fastq.gz BS04344A_S11_L003_R2_001.fastq.gz,fastq fastq,1656307800.0,19717950.0,GSM4632817 r9,0:28 1:56,A:437659373;C:388059609;G:402815347;T:427415299;N:358172,28,56,,,437659373,388059609,402815347,427415299,358172,SRX8598386,SRS6888921,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00789,0.93802,0.00267,0.11398,0.9906,0.82047,0.33804,0.50558,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59961,SRR12070734,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04338A_S5_L001_R1_001.fastq.gz BS04338A_S5_L001_R2_001.fastq.gz,fastq fastq,1311615732.0,15614473.0,GSM4632816 r1,0:28 1:56,A:347527688;C:309974348;G:318631698;T:335079961;N:402037,28,56,,,347527688,309974348,318631698,335079961,402037,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00763,0.9593,0.00208,0.09378,0.98898,0.83349,0.37416,0.49313,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59962,SRR12070735,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04341A_S8_L001_R1_001.fastq.gz BS04341A_S8_L001_R2_001.fastq.gz,fastq fastq,1270200708.0,15121437.0,GSM4632816 r10,0:28 1:56,A:336795256;C:300398767;G:308213240;T:324405364;N:388081,28,56,,,336795256,300398767,308213240,324405364,388081,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00751,0.95963,0.00207,0.09447,0.98916,0.8314,0.35762,0.50828,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59963,SRR12070736,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04341A_S8_L002_R1_001.fastq.gz BS04341A_S8_L002_R2_001.fastq.gz,fastq fastq,1223950224.0,14570836.0,GSM4632816 r11,0:28 1:56,A:324608418;C:289680517;G:297297131;T:312352549;N:11609,28,56,,,324608418,289680517,297297131,312352549,11609,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00708,0.9598,0.002,0.09294,0.99022,0.83213,0.33884,0.50951,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59964,SRR12070737,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04341A_S8_L003_R1_001.fastq.gz BS04341A_S8_L003_R2_001.fastq.gz,fastq fastq,1323924336.0,15761004.0,GSM4632816 r12,0:28 1:56,A:350797522;C:313234163;G:321554860;T:338054592;N:283199,28,56,,,350797522,313234163,321554860,338054592,283199,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00709,0.96024,0.00195,0.09291,0.98959,0.83017,0.35889,0.49735,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59965,SRR12070738,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04338A_S5_L002_R1_001.fastq.gz BS04338A_S5_L002_R2_001.fastq.gz,fastq fastq,1264110708.0,15048937.0,GSM4632816 r2,0:28 1:56,A:335066695;C:299007377;G:307338186;T:322686294;N:12156,28,56,,,335066695,299007377,307338186,322686294,12156,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00728,0.95973,0.00208,0.09402,0.98979,0.83445,0.35513,0.50088,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59966,SRR12070739,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04338A_S5_L003_R1_001.fastq.gz BS04338A_S5_L003_R2_001.fastq.gz,fastq fastq,1366680756.0,16270009.0,GSM4632816 r3,0:28 1:56,A:361843580;C:323086539;G:332361489;T:349096569;N:292579,28,56,,,361843580,323086539,332361489,349096569,292579,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00734,0.95892,0.00218,0.09311,0.98953,0.83289,0.34964,0.50977,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59967,SRR12070740,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04339A_S6_L001_R1_001.fastq.gz BS04339A_S6_L001_R2_001.fastq.gz,fastq fastq,1352025864.0,16095546.0,GSM4632816 r4,0:28 1:56,A:358402959;C:319694946;G:328088223;T:345424374;N:415362,28,56,,,358402959,319694946,328088223,345424374,415362,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00697,0.95973,0.00205,0.09369,0.99011,0.83021,0.36909,0.50458,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59968,SRR12070741,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04339A_S6_L002_R1_001.fastq.gz BS04339A_S6_L002_R2_001.fastq.gz,fastq fastq,1304090760.0,15524890.0,GSM4632816 r5,0:28 1:56,A:345766968;C:308548061;G:316769693;T:332994324;N:11714,28,56,,,345766968,308548061,316769693,332994324,11714,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00717,0.95656,0.00217,0.09379,0.99015,0.83169,0.36105,0.51476,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59969,SRR12070742,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04339A_S6_L003_R1_001.fastq.gz BS04339A_S6_L003_R2_001.fastq.gz,fastq fastq,1406407128.0,16742942.0,GSM4632816 r6,0:28 1:56,A:372572183;C:332639156;G:341683559;T:359207654;N:304576,28,56,,,372572183,332639156,341683559,359207654,304576,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00749,0.95928,0.00212,0.09425,0.98977,0.83055,0.36094,0.48857,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59970,SRR12070743,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04340A_S7_L001_R1_001.fastq.gz BS04340A_S7_L001_R2_001.fastq.gz,fastq fastq,1188179244.0,14144991.0,GSM4632816 r7,0:28 1:56,A:314940110;C:280828061;G:288608958;T:303432761;N:369354,28,56,,,314940110,280828061,288608958,303432761,369354,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00707,0.95938,0.00201,0.09367,0.99011,0.83291,0.35403,0.49692,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59971,SRR12070744,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04340A_S7_L002_R1_001.fastq.gz BS04340A_S7_L002_R2_001.fastq.gz,fastq fastq,1147566504.0,13661506.0,GSM4632816 r8,0:28 1:56,A:304311650;C:271427834;G:278942780;T:292873193;N:11047,28,56,,,304311650,271427834,278942780,292873193,11047,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00704,0.95991,0.00205,0.09331,0.98961,0.83224,0.36067,0.4913,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59972,SRR12070745,SRX8598385,SRS6888920,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryPRO P PRO,GSM4632816,,tissue:Zebrafish melanoma cell line|cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,InVivoPrimaryPRO P PRO,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL PRO TdTomato|cell type:Zebrafish melanoma,GSM4632816,GSM4632816: InVivoPrimaryPRO P PRO; Danio rerio; RNA Seq,GSM4632816,,1,none provided by the submitter,GEO Accession:GSM4632816,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04340A_S7_L003_R1_001.fastq.gz BS04340A_S7_L003_R2_001.fastq.gz,fastq fastq,1241074716.0,14774699.0,GSM4632816 r9,0:28 1:56,A:328745456;C:293441665;G:301717606;T:316896776;N:273213,28,56,,,328745456,293441665,301717606,316896776,273213,SRX8598385,SRS6888920,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00738,0.95893,0.00217,0.0938,0.98963,0.83366,0.37411,0.51458,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59973,SRR12070722,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04334A_S1_L001_R1_001.fastq.gz BS04334A_S1_L001_R2_001.fastq.gz,fastq fastq,1400490924.0,16672511.0,GSM4632815 r1,0:28 1:56,A:370795902;C:327161529;G:339773205;T:362324702;N:435586,28,56,,,370795902,327161529,339773205,362324702,435586,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00787,0.95084,0.00277,0.1197,0.9904,0.81889,0.33333,0.49641,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59974,SRR12070723,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04337A_S4_L001_R1_001.fastq.gz BS04337A_S4_L001_R2_001.fastq.gz,fastq fastq,1210463352.0,14410278.0,GSM4632815 r10,0:28 1:56,A:320796223;C:282744567;G:293319961;T:313229529;N:373072,28,56,,,320796223,282744567,293319961,313229529,373072,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.0078,0.95544,0.00272,0.11916,0.99044,0.82069,0.32851,0.493,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59975,SRR12070724,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04337A_S4_L002_R1_001.fastq.gz BS04337A_S4_L002_R2_001.fastq.gz,fastq fastq,1338772176.0,15937764.0,GSM4632815 r11,0:28 1:56,A:354800086;C:313048225;G:324772317;T:346138940;N:12608,28,56,,,354800086,313048225,324772317,346138940,12608,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00803,0.95217,0.00257,0.11937,0.98987,0.81842,0.32183,0.49682,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59976,SRR12070725,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04337A_S4_L003_R1_001.fastq.gz BS04337A_S4_L003_R2_001.fastq.gz,fastq fastq,1317319584.0,15682376.0,GSM4632815 r12,0:28 1:56,A:348818109;C:307862457;G:319580031;T:340778334;N:280653,28,56,,,348818109,307862457,319580031,340778334,280653,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00807,0.94993,0.00281,0.11973,0.99022,0.81893,0.32167,0.4902,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59977,SRR12070726,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04334A_S1_L002_R1_001.fastq.gz BS04334A_S1_L002_R2_001.fastq.gz,fastq fastq,1546148520.0,18406530.0,GSM4632815 r2,0:28 1:56,A:409479170;C:361530673;G:375471276;T:399652828;N:14573,28,56,,,409479170,361530673,375471276,399652828,14573,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00794,0.95104,0.00291,0.11944,0.99074,0.81789,0.31656,0.47492,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59978,SRR12070727,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04334A_S1_L003_R1_001.fastq.gz BS04334A_S1_L003_R2_001.fastq.gz,fastq fastq,1525047552.0,18155328.0,GSM4632815 r3,0:28 1:56,A:403506761;C:356422354;G:370392628;T:394395917;N:329892,28,56,,,403506761,356422354,370392628,394395917,329892,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00792,0.94984,0.00274,0.11839,0.99042,0.81846,0.33841,0.49505,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59979,SRR12070728,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04335A_S2_L001_R1_001.fastq.gz BS04335A_S2_L001_R2_001.fastq.gz,fastq fastq,1415856792.0,16855438.0,GSM4632815 r4,0:28 1:56,A:374829638;C:330746758;G:343674111;T:366168570;N:437715,28,56,,,374829638,330746758,343674111,366168570,437715,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00771,0.94973,0.00262,0.1191,0.99032,0.81909,0.29399,0.50598,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59980,SRR12070729,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04335A_S2_L002_R1_001.fastq.gz BS04335A_S2_L002_R2_001.fastq.gz,fastq fastq,1566708696.0,18651294.0,GSM4632815 r5,0:28 1:56,A:414884615;C:366309114;G:380613229;T:404886588;N:15150,28,56,,,414884615,366309114,380613229,404886588,15150,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00801,0.95055,0.00274,0.11743,0.99013,0.81862,0.3227,0.48028,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59981,SRR12070730,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04335A_S2_L003_R1_001.fastq.gz BS04335A_S2_L003_R2_001.fastq.gz,fastq fastq,1545433596.0,18398019.0,GSM4632815 r6,0:28 1:56,A:408845990;C:361118232;G:375585275;T:399550646;N:333453,28,56,,,408845990,361118232,375585275,399550646,333453,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00755,0.9505,0.00271,0.11954,0.99052,0.81953,0.33586,0.49085,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59982,SRR12070731,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04336A_S3_L001_R1_001.fastq.gz BS04336A_S3_L001_R2_001.fastq.gz,fastq fastq,1347360588.0,16040007.0,GSM4632815 r7,0:28 1:56,A:356615271;C:314650478;G:327125472;T:348559328;N:410039,28,56,,,356615271,314650478,327125472,348559328,410039,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00784,0.95096,0.00274,0.11988,0.99068,0.82077,0.31827,0.48835,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59983,SRR12070732,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04336A_S3_L002_R1_001.fastq.gz BS04336A_S3_L002_R2_001.fastq.gz,fastq fastq,1492901760.0,17772640.0,GSM4632815 r8,0:28 1:56,A:395238532;C:348983658;G:362818610;T:385847191;N:13769,28,56,,,395238532,348983658,362818610,385847191,13769,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00809,0.95035,0.00306,0.11747,0.99103,0.82059,0.33679,0.49389,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor
59984,SRR12070733,SRX8598384,SRS6888919,SRP268341,PRJNA641144,Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [RNA Seq],GSE152998,Transcriptome Analysis,We report single cell gene expression profiling of the zebrafish melanoma cell lines ZMEL1 PRO and ZMEL1 INV under multiple in vitro and in vivo zebrafish transplant conditions Overall design: Single cell RNA seq of ZMEL1 PRO and ZMEL1 INV cells in one of four conditions: 1 in vitro individual culture; 2 in vitro co culture; 3 in vivo primary tumors; and 4 in vivo metastases,parent bioproject:PRJNA636815,pubmed:34529939,,InVivoPrimaryINV P INV,GSM4632815,,tissue:Zebrafish melanoma cell line|cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,InVivoPrimaryINV P INV,Cell ranger 3.1.0 Seurat v3 Genome build: GRCz10  Ensembl version 81 Supplementary files format and content: csv,Zebrafish melanoma cell line,,none provided by the submitter,,cell line:ZMEL INV GFP|cell type:Zebrafish melanoma,GSM4632815,GSM4632815: InVivoPrimaryINV P INV; Danio rerio; RNA Seq,GSM4632815,,1,none provided by the submitter,GEO Accession:GSM4632815,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,NextSeq 500,,SRP268341,,,BS04336A_S3_L003_R1_001.fastq.gz BS04336A_S3_L003_R2_001.fastq.gz,fastq fastq,1471487472.0,17517708.0,GSM4632815 r9,0:28 1:56,A:389163670;C:343823839;G:357702896;T:380486964;N:310103,28,56,,,389163670,343823839,357702896,380486964,310103,SRX8598384,SRS6888919,SRA1089858,GEO,Memorial Sloan Kettering Cancer Center,2,0.00773,0.95013,0.00274,0.11963,0.99082,0.81982,0.29162,0.47444,28,56,T,B,sc-like readlen,illumina,nextseq,unknown,cdna_unspecified,unknown,sc_generic,single_cell_generic,generic-scrnaseq-only,,United States,2020-06-22,Undetermined,Undetermined,Cancer or Tumor,Cancer or Tumor