rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 56007,SRR10895915,SRX7564564,SRS6001797,SRP241982,PRJNA599026,Project of basal ray finned fishes,PRJNA599026,Other,The project is to study the oldest fish lineages in the ray finned fishes. Although they belong to fish their body structure and behavior remain highly similar to that of the tetrapods. Through comparative genome analysis with living vertebrates we provides insights into the molecular basis of terrestrial adaptation of basal ray finned fishes.,,pubmed:33545088;pubmed:12470943,,,Zebrafish 002,,strain:not collected|isolate:not collected|breed:not collected|cultivar:not collected|ecotype:not collected|age:not collected|dev stage:Adult|sex:not determined|tissue:Gill|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult,CL100101924 L01 4,CL100101924 L01 4,,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP241982,,,CL100101924_L01_542_2.fq.gz CL100101924_L01_542_1.fq.gz,fastq fastq,9311999200.0,93119992.0,CL100101924 L01 542 1.fq.gz,0:100 1:100,A:2545207764;C:2065502824;G:2111148485;T:2578747353;N:11392774,100,100,,,2545207764,2065502824,2111148485,2578747353,11392774,SRX7564564,SRS6001797,SRA1026516,BGI|BGI-Research,BGI,1,0.91339,,0.10797,,0.69792,,0.52261,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-01-15,Adult,Adult,Gill,Respiratory System 56008,SRR10895916,SRX7564563,SRS6001797,SRP241982,PRJNA599026,Project of basal ray finned fishes,PRJNA599026,Other,The project is to study the oldest fish lineages in the ray finned fishes. Although they belong to fish their body structure and behavior remain highly similar to that of the tetrapods. Through comparative genome analysis with living vertebrates we provides insights into the molecular basis of terrestrial adaptation of basal ray finned fishes.,,pubmed:33545088;pubmed:12470943,,,Zebrafish 002,,strain:not collected|isolate:not collected|breed:not collected|cultivar:not collected|ecotype:not collected|age:not collected|dev stage:Adult|sex:not determined|tissue:Gill|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult,CL100101924 L01 3,CL100101924 L01 3,,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP241982,,,CL100101924_L01_541_1.fq.gz CL100101924_L01_541_2.fq.gz,fastq fastq,10478802600.0,104788026.0,CL100101924 L01 541 1.fq.gz,0:100 1:100,A:2866250643;C:2322460084;G:2375280057;T:2901876128;N:12935688,100,100,,,2866250643,2322460084,2375280057,2901876128,12935688,SRX7564563,SRS6001797,SRA1026516,BGI|BGI-Research,BGI,1,0.9209,,0.11359,,0.69858,,0.53578,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-01-15,Adult,Adult,Gill,Respiratory System 56009,SRR10895917,SRX7564562,SRS6001797,SRP241982,PRJNA599026,Project of basal ray finned fishes,PRJNA599026,Other,The project is to study the oldest fish lineages in the ray finned fishes. Although they belong to fish their body structure and behavior remain highly similar to that of the tetrapods. Through comparative genome analysis with living vertebrates we provides insights into the molecular basis of terrestrial adaptation of basal ray finned fishes.,,pubmed:33545088;pubmed:12470943,,,Zebrafish 002,,strain:not collected|isolate:not collected|breed:not collected|cultivar:not collected|ecotype:not collected|age:not collected|dev stage:Adult|sex:not determined|tissue:Gill|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult,CL100101924 L01 2,CL100101924 L01 2,,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP241982,,,CL100101924_L01_543_1.fq.gz CL100101924_L01_543_2.fq.gz,fastq fastq,10370355000.0,103703550.0,CL100101924 L01 543 1.fq.gz,0:100 1:100,A:2824450277;C:2308377166;G:2360285452;T:2864390654;N:12851451,100,100,,,2824450277,2308377166,2360285452,2864390654,12851451,SRX7564562,SRS6001797,SRA1026516,BGI|BGI-Research,BGI,1,0.91018,,0.09651,,0.70224,,0.53831,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-01-15,Adult,Adult,Gill,Respiratory System 56010,SRR10895918,SRX7564561,SRS6001797,SRP241982,PRJNA599026,Project of basal ray finned fishes,PRJNA599026,Other,The project is to study the oldest fish lineages in the ray finned fishes. Although they belong to fish their body structure and behavior remain highly similar to that of the tetrapods. Through comparative genome analysis with living vertebrates we provides insights into the molecular basis of terrestrial adaptation of basal ray finned fishes.,,pubmed:33545088;pubmed:12470943,,,Zebrafish 002,,strain:not collected|isolate:not collected|breed:not collected|cultivar:not collected|ecotype:not collected|age:not collected|dev stage:Adult|sex:not determined|tissue:Gill|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult,CL100101924 L01,CL100101924 L01,,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP241982,,,CL100101924_L01_544_2.fq.gz CL100101924_L01_544_1.fq.gz,fastq fastq,8686710000.0,86867100.0,CL100101924 L01 544 1.fq.gz,0:100 1:100,A:2361387592;C:1935295339;G:1982562294;T:2396806096;N:10658679,100,100,,,2361387592,1935295339,1982562294,2396806096,10658679,SRX7564561,SRS6001797,SRA1026516,BGI|BGI-Research,BGI,1,0.90603,,0.12145,,0.69412,,0.52836,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-01-15,Adult,Adult,Gill,Respiratory System 56011,SRR10895919,SRX7564560,SRS6001797,SRP241982,PRJNA599026,Project of basal ray finned fishes,PRJNA599026,Other,The project is to study the oldest fish lineages in the ray finned fishes. Although they belong to fish their body structure and behavior remain highly similar to that of the tetrapods. Through comparative genome analysis with living vertebrates we provides insights into the molecular basis of terrestrial adaptation of basal ray finned fishes.,,pubmed:33545088;pubmed:12470943,,,Zebrafish 002,,strain:not collected|isolate:not collected|breed:not collected|cultivar:not collected|ecotype:not collected|age:not collected|dev stage:Adult|sex:not determined|tissue:Gill|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio : adult,CL100103858 L02,CL100103858 L02,,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP241982,,,CL100103858_L02_530_1.fq.gz CL100103858_L02_530_2.fq.gz,fastq fastq,9390776200.0,93907762.0,CL100103858 L02 530 1.fq.gz,0:100 1:100,A:2561256067;C:2084956400;G:2134804271;T:2596713447;N:13046015,100,100,,,2561256067,2084956400,2134804271,2596713447,13046015,SRX7564560,SRS6001797,SRA1026516,BGI|BGI-Research,BGI,1,0.91926,,0.11028,,0.69485,,0.54756,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-01-15,Adult,Adult,Gill,Respiratory System 63052,SRR13587425,SRX9982120,SRS8153603,SRP303929,PRJNA698005,Danio rerio Raw sequence reads,PRJNA698005,Whole Genome Sequencing,Danio rerio Raw RNA sequence reads,,,,Model organism or animal sample from Danio rerio,The gill of Danio rerio,,isolate:river|age:adult|sex:not determined|tissue:gill|BioSampleModel:Model organism or animal,,,,,,,,,9ZG,9ZG,9ZG,The gill experiment repeat 3 of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP303929,,,9ZG_1.fq.gz 9ZG_2.fq.gz,fastq fastq,8056935600.0,53712904.0,9ZG 1.fq.gz,0:150 1:150,A:2282673113;C:1739857627;G:1727599599;T:2306805261;N:0,150,150,,,2282673113,1739857627,1727599599,2306805261,0,SRX9982120,SRS8153603,SRA1189632,Center for Ecological and Environmental Sciences|Northwestern Polytechnical University,Center for Ecological and Environmental Sciences,1,0.89727,,0.12013,,0.70043,,0.53736,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-30,Adult,Adult,Gill,Respiratory System 63053,SRR13587426,SRX9982119,SRS8153603,SRP303929,PRJNA698005,Danio rerio Raw sequence reads,PRJNA698005,Whole Genome Sequencing,Danio rerio Raw RNA sequence reads,,,,Model organism or animal sample from Danio rerio,The gill of Danio rerio,,isolate:river|age:adult|sex:not determined|tissue:gill|BioSampleModel:Model organism or animal,,,,,,,,,24ZG,24ZG,24ZG,The gill control repeat 3 of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP303929,,,24ZG_1.fq.gz 24ZG_2.fq.gz,fastq fastq,8223747600.0,54824984.0,24ZG 1.fq.gz,0:150 1:150,A:2300974904;C:1808864978;G:1782331401;T:2331317250;N:259067,150,150,,,2300974904,1808864978,1782331401,2331317250,259067,SRX9982119,SRS8153603,SRA1189632,Center for Ecological and Environmental Sciences|Northwestern Polytechnical University,Center for Ecological and Environmental Sciences,1,0.89723,,0.1296,,0.69392,,0.52375,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-30,Adult,Adult,Gill,Respiratory System 63054,SRR13587427,SRX9982118,SRS8153603,SRP303929,PRJNA698005,Danio rerio Raw sequence reads,PRJNA698005,Whole Genome Sequencing,Danio rerio Raw RNA sequence reads,,,,Model organism or animal sample from Danio rerio,The gill of Danio rerio,,isolate:river|age:adult|sex:not determined|tissue:gill|BioSampleModel:Model organism or animal,,,,,,,,,8ZG,8ZG,8ZG,The gill experiment repeat 2 of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP303929,,,8ZG_1.fq.gz 8ZG_2.fq.gz,fastq fastq,8214407100.0,54762714.0,8ZG 1.fq.gz,0:150 1:150,A:2359573564;C:1747625839;G:1728726696;T:2377197140;N:1283861,150,150,,,2359573564,1747625839,1728726696,2377197140,1283861,SRX9982118,SRS8153603,SRA1189632,Center for Ecological and Environmental Sciences|Northwestern Polytechnical University,Center for Ecological and Environmental Sciences,1,0.88408,,0.12447,,0.72086,,0.55321,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-30,Adult,Adult,Gill,Respiratory System 63055,SRR13587428,SRX9982117,SRS8153603,SRP303929,PRJNA698005,Danio rerio Raw sequence reads,PRJNA698005,Whole Genome Sequencing,Danio rerio Raw RNA sequence reads,,,,Model organism or animal sample from Danio rerio,The gill of Danio rerio,,isolate:river|age:adult|sex:not determined|tissue:gill|BioSampleModel:Model organism or animal,,,,,,,,,19Z G,19Z G,19Z G,The gill control repeat 2 of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP303929,,,19Z_G_1.fq.gz 19Z_G_2.fq.gz,fastq fastq,8028541200.0,53523608.0,19Z G 1.fq.gz,0:150 1:150,A:2247179404;C:1754236774;G:1743325699;T:2283346353;N:452970,150,150,,,2247179404,1754236774,1743325699,2283346353,452970,SRX9982117,SRS8153603,SRA1189632,Center for Ecological and Environmental Sciences|Northwestern Polytechnical University,Center for Ecological and Environmental Sciences,1,0.89168,,0.12028,,0.69583,,0.53641,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-30,Adult,Adult,Gill,Respiratory System 63056,SRR13587429,SRX9982116,SRS8153603,SRP303929,PRJNA698005,Danio rerio Raw sequence reads,PRJNA698005,Whole Genome Sequencing,Danio rerio Raw RNA sequence reads,,,,Model organism or animal sample from Danio rerio,The gill of Danio rerio,,isolate:river|age:adult|sex:not determined|tissue:gill|BioSampleModel:Model organism or animal,,,,,,,,,10ZG,10ZG,10ZG,The gill experiment repeat 1 of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP303929,,,10ZG_1.fq.gz 10ZG_2.fq.gz,fastq fastq,8082344700.0,53882298.0,10ZG 1.fq.gz,0:150 1:150,A:2320760605;C:1718839525;G:1702987067;T:2339757503;N:0,150,150,,,2320760605,1718839525,1702987067,2339757503,0,SRX9982116,SRS8153603,SRA1189632,Center for Ecological and Environmental Sciences|Northwestern Polytechnical University,Center for Ecological and Environmental Sciences,1,0.89032,,0.12963,,0.70183,,0.53117,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-30,Adult,Adult,Gill,Respiratory System 63057,SRR13587430,SRX9982115,SRS8153603,SRP303929,PRJNA698005,Danio rerio Raw sequence reads,PRJNA698005,Whole Genome Sequencing,Danio rerio Raw RNA sequence reads,,,,Model organism or animal sample from Danio rerio,The gill of Danio rerio,,isolate:river|age:adult|sex:not determined|tissue:gill|BioSampleModel:Model organism or animal,,,,,,,,,10Z G,10Z G,10Z G,The gill control repeat 1 of Danio rerio,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM,PAIRED,BGISEQ,BGISEQ-500,,SRP303929,,,10Z_G_1.fq.gz 10Z_G_2.fq.gz,fastq fastq,8110400400.0,54069336.0,10Z G 1.fq.gz,0:150 1:150,A:2285699758;C:1760759240;G:1749573038;T:2313865140;N:503224,150,150,,,2285699758,1760759240,1749573038,2313865140,503224,SRX9982115,SRS8153603,SRA1189632,Center for Ecological and Environmental Sciences|Northwestern Polytechnical University,Center for Ecological and Environmental Sciences,1,0.88013,,0.10821,,0.70364,,0.55271,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-30,Adult,Adult,Gill,Respiratory System