rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
72366,SRR22805212,SRX18764981,SRS16199877,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,44,BHbisPhenolF 10uM for ribosome profiling replicate 2,,strain:AB|isolate:44|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,BHbisPhenolF 10uM for ribosome profiling replicate 2,44,44,44,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,BHPF_10uM_for_ribosome_profiling_replicate_2_R1.fastq.gz BHPF_10uM_for_ribosome_profiling_replicate_2_R2.fastq.gz,fastq fastq,14888679600.0,49628932.0,BHbisPhenolF 10uM for ribosome profiling replicate 2 R1.fastq.gz,0:150 1:150,A:2177600650;C:2419699560;G:8025893657;T:2265187698;N:298035,150,150,,,2177600650,2419699560,8025893657,2265187698,298035,SRX18764981,SRS16199877,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,0.0,0.64018,0.0,0.06137,1.0,0.83913,,0.80601,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures
72367,SRR22805213,SRX18764980,SRS16199875,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,43,BHbisPhenolF 10uM for ribosome profiling replicate 1,,strain:AB|isolate:43|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,BHbisPhenolF 10uM for ribosome profiling replicate 1,43,43,43,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,BHPF_10uM_for_ribosome_profiling_replicate_1_R1.fastq.gz BHPF_10uM_for_ribosome_profiling_replicate_1_R2.fastq.gz,fastq fastq,15098951400.0,50329838.0,BHbisPhenolF 10uM for ribosome profiling replicate 1 R1.fastq.gz,0:150 1:150,A:2096550012;C:2382609157;G:8321980233;T:2297312503;N:499495,150,150,,,2096550012,2382609157,8321980233,2297312503,499495,SRX18764980,SRS16199875,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,4e-05,0.62435,0.0,0.06076,0.99993,0.84279,0.75,0.77804,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures
72368,SRR22805214,SRX18764979,SRS16199876,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,42,DMSO control for ribosome profiling replicate 2,,strain:AB|isolate:42|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,DMSO control for ribosome profiling replicate 2,42,42,42,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,DMSO_control_for_ribosome_profiling_replicate_2_R1.fastq.gz DMSO_control_for_ribosome_profiling_replicate_2_R2.fastq.gz,fastq fastq,13980558600.0,46601862.0,DMSO control for ribosome profiling replicate 2 R1.fastq.gz,0:150 1:150,A:2002344572;C:2128464587;G:7737629750;T:2111846347;N:273344,150,150,,,2002344572,2128464587,7737629750,2111846347,273344,SRX18764979,SRS16199876,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,0.0,0.5747,0.0,0.04778,1.0,0.85411,,0.72362,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures
72369,SRR22805215,SRX18764978,SRS16199874,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,41,DMSO control for ribosome profiling replicate 1,,strain:AB|isolate:41|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,DMSO control for ribosome profiling replicate 1,41,41,41,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,DMSO_control_for_ribosome_profiling_replicate_1_R1.fastq.gz DMSO_control_for_ribosome_profiling_replicate_1_R2.fastq.gz,fastq fastq,15802088100.0,52673627.0,DMSO control for ribosome profiling replicate 1 R1.fastq.gz,0:150 1:150,A:2301580863;C:2488100262;G:8575515119;T:2436818717;N:73139,150,150,,,2301580863,2488100262,8575515119,2436818717,73139,SRX18764978,SRS16199874,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,0.0,0.59521,0.0,0.05092,1.0,0.84471,,0.75944,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures
72375,SRR22805221,SRX18764972,SRS16199868,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,36,36.ythdf2 MO for ribosome profiling replicate 2,,strain:AB|isolate:36|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,36.ythdf2 MO for ribosome profiling replicate 2,36,36,36,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,ythdf2_MO_for_ribosome_profiling_replicate_2_R1.fastq.gz ythdf2_MO_for_ribosome_profiling_replicate_2_R2.fastq.gz,fastq fastq,17815545600.0,59385152.0,ythdf2 MO for ribosome profiling replicate 2 R1.fastq.gz,0:150 1:150,A:2527267522;C:2803112888;G:9669305830;T:2815502488;N:356872,150,150,,,2527267522,2803112888,9669305830,2815502488,356872,SRX18764972,SRS16199868,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,0.0,0.6595,0.0,0.05763,1.0,0.82359,,0.76446,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures
72376,SRR22805222,SRX18764971,SRS16199867,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,35,35.ythdf2 MO for ribosome profiling replicate 1,,strain:AB|isolate:35|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,35.ythdf2 MO for ribosome profiling replicate 1,35,35,35,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,ythdf2_MO_for_ribosome_profiling_replicate_1_R1.fastq.gz ythdf2_MO_for_ribosome_profiling_replicate_1_R2.fastq.gz,fastq fastq,14133373800.0,47111246.0,ythdf2 MO for ribosome profiling replicate 1 R1.fastq.gz,0:150 1:150,A:2066299382;C:2279837250;G:7718113208;T:2069058663;N:65297,150,150,,,2066299382,2279837250,7718113208,2069058663,65297,SRX18764971,SRS16199867,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,0.0,0.68906,0.0,0.06024,1.0,0.81633,,0.76663,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures
72377,SRR22805223,SRX18764970,SRS16199866,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,34,34.Control knockdown for ribosome profiling replicate 2,,strain:AB|isolate:34|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,34.Control knockdown for ribosome profiling replicate 2,34,34,34,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,Control_knockdown_for_ribosome_profiling_replicate_2_R1.fastq.gz Control_knockdown_for_ribosome_profiling_replicate_2_R2.fastq.gz,fastq fastq,15570048000.0,51900160.0,Control knockdown for ribosome profiling replicate 2 R1.fastq.gz,0:150 1:150,A:2253659984;C:2507376043;G:8463755127;T:2344938646;N:318200,150,150,,,2253659984,2507376043,8463755127,2344938646,318200,SRX18764970,SRS16199866,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,0.0,0.57539,0.0,0.06254,1.0,0.86989,,0.80447,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures
72378,SRR22805224,SRX18764969,SRS16199865,SRP413700,PRJNA906294,Danio rerio Raw sequence reads,PRJNA906294,Other,Investigating BPA substitute BHbisPhenolF for zebrafish cardiac and vascular toxicity,,,,33,33.Control knockdown for ribosome profiling replicate 1,,strain:AB|isolate:33|dev stage:48hpf|sex:not determined|tissue:whole embryos|BioSampleModel:Model organism or animal,,,,,,,,,33.Control knockdown for ribosome profiling replicate 1,33,33,33,,,miRNA-Seq,TRANSCRIPTOMIC,Oligo-dT,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP413700,,,Control_knockdown_for_ribosome_profiling_replicate_1_R1.fastq.gz Control_knockdown_for_ribosome_profiling_replicate_1_R2.fastq.gz,fastq fastq,21657503400.0,72191678.0,Control knockdown for ribosome profiling replicate 1 R1.fastq.gz,0:150 1:150,A:3052615137;C:3123462026;G:12407511554;T:3073813355;N:101328,150,150,,,3052615137,3123462026,12407511554,3073813355,101328,SRX18764969,SRS16199865,SRA1560952,Zhejiang University|Institute of Genetics,Zhejiang University,2,0.0,0.51073,0.0,0.05546,1.0,0.88162,,0.79972,150,150,T,B,mate1 technical by mapping diff,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-12-19,Hatching,Embryo,Whole Organism,All anatomical structures