rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
31514,SRR28435337,SRX24039257,SRS20832031,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,cry dash /  group 2 at CT 16,Cryd CT16G2,Unknown BA023 04T0008.fq.gz,,isolate:The second group of cry dash /  fish collected at CT 16.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:cry dash / |health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0008.fq.gz,Unknown BA023 04T0008.fq.gz,CT16 cry dash group2,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0008_good_2.fq.gz Unknown_BA023-04T0008_good_1.fq.gz,fastq fastq,6928082472.0,23162452.0,Unknown BA023 04T0008 good 1.fq.gz,0:149.55 1:149.55,A:1783381005;C:1671764458;G:1686432861;T:1786331460;N:172688,149,149,,,1783381005,1671764458,1686432861,1786331460,172688,SRX24039257,SRS20832031,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.96107,0.96048,0.06638,0.06578,0.68546,0.68582,0.46626,0.45803,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined
31515,SRR28435338,SRX24039256,SRS20832030,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,cry dash /  group 1 at CT 16,Cryd CT16G1,Unknown BA023 04T0007.fq.gz,,isolate:The first group of cry dash /  fish collected at CT 16.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:cry dash / |health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0007.fq.gz,Unknown BA023 04T0007.fq.gz,CT16 cry dash group1,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0007_good_2.fq.gz Unknown_BA023-04T0007_good_1.fq.gz,fastq fastq,7247045982.0,24239568.0,Unknown BA023 04T0007 good 1.fq.gz,0:149.49 1:149.49,A:1868252704;C:1747715656;G:1761213537;T:1869681292;N:182793,149,149,,,1868252704,1747715656,1761213537,1869681292,182793,SRX24039256,SRS20832030,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.95954,0.95937,0.0624,0.06218,0.68809,0.68765,0.47347,0.47429,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined
31516,SRR28435339,SRX24039255,SRS20832029,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,cry dash /  group 2 at CT 4,Cryd CT4G2,Unknown BA023 04T0006.fq.gz,,isolate:The second group of cry dash /  fish collected at CT 4.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:cry dash / |health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0006.fq.gz,Unknown BA023 04T0006.fq.gz,CT4 cry dash group2,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0006_good_1.fq.gz Unknown_BA023-04T0006_good_2.fq.gz,fastq fastq,7467294282.0,24985127.0,Unknown BA023 04T0006 good 1.fq.gz,0:149.43 1:149.43,A:1940430660;C:1790773066;G:1798765445;T:1937139187;N:185924,149,149,,,1940430660,1790773066,1798765445,1937139187,185924,SRX24039255,SRS20832029,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.95702,0.95753,0.08848,0.08877,0.6829,0.68199,0.49417,0.49443,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined
31517,SRR28435340,SRX24039254,SRS20832028,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,cry dash /  group 1 at CT 4,Cryd CT4G1,Unknown BA023 04T0005.fq.gz,,isolate:The first group of cry dash /  fish collected at CT 4.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:cry dash / |health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0005.fq.gz,Unknown BA023 04T0005.fq.gz,CT4 cry dash group1,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0005_good_1.fq.gz Unknown_BA023-04T0005_good_2.fq.gz,fastq fastq,6766310740.0,22646274.0,Unknown BA023 04T0005 good 1.fq.gz,0:149.39 1:149.39,A:1762324132;C:1615995203;G:1625767974;T:1762055354;N:168077,149,149,,,1762324132,1615995203,1625767974,1762055354,168077,SRX24039254,SRS20832028,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.95588,0.95587,0.06663,0.06633,0.67911,0.67888,0.46701,0.47626,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined
31518,SRR28435341,SRX24039253,SRS20832027,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,WT group 2 at CT 16,WT CT16G2,Unknown BA023 04T0004.fq.gz,,isolate:The second group of WT fish collected at CT 16.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:wildtype|health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0004.fq.gz,Unknown BA023 04T0004.fq.gz,CT6 WT group2,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0004_good_2.fq.gz Unknown_BA023-04T0004_good_1.fq.gz,fastq fastq,6830283170.0,22847843.0,Unknown BA023 04T0004 good 1.fq.gz,0:149.47 1:149.47,A:1791839697;C:1618554485;G:1627518993;T:1792199298;N:170697,149,149,,,1791839697,1618554485,1627518993,1792199298,170697,SRX24039253,SRS20832027,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.9515,0.94997,0.08493,0.08422,0.67178,0.67316,0.47915,0.48187,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined
31519,SRR28435342,SRX24039252,SRS20832026,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,WT group 1 at CT 16,WT CT16G1,Unknown BA023 04T0003.fq.gz,,isolate:The first group of WT fish collected at CT 16.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:wildtype|health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0003.fq.gz,Unknown BA023 04T0003.fq.gz,CT6 WT group1,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0003_good_1.fq.gz Unknown_BA023-04T0003_good_2.fq.gz,fastq fastq,6430546584.0,21512133.0,Unknown BA023 04T0003 good 1.fq.gz,0:149.46 1:149.46,A:1678015842;C:1530296350;G:1541505212;T:1680568743;N:160437,149,149,,,1678015842,1530296350,1541505212,1680568743,160437,SRX24039252,SRS20832026,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.94974,0.95051,0.08145,0.0819,0.6775,0.67848,0.47999,0.47986,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined
31520,SRR28435343,SRX24039251,SRS20832025,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,WT group 2 at CT 4,WT CT4G2,Unknown BA023 04T0002.fq.gz,,isolate:The second group of WT fish collected at CT 4.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:wildtype|health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0002.fq.gz,Unknown BA023 04T0002.fq.gz,CT4 WT group2,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0002_good_1.fq.gz Unknown_BA023-04T0002_good_2.fq.gz,fastq fastq,7084078326.0,23701315.0,Unknown BA023 04T0002 good 1.fq.gz,0:149.44 1:149.44,A:1855453089;C:1679520129;G:1688607029;T:1860319577;N:178502,149,149,,,1855453089,1679520129,1688607029,1860319577,178502,SRX24039251,SRS20832025,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.95393,0.95431,0.07799,0.07802,0.66728,0.66835,0.46237,0.47322,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined
31521,SRR28435344,SRX24039250,SRS20832024,SRP497569,PRJNA1090643,Danio rerio Raw sequence reads,PRJNA1090643,Other,The transcriptome of WT and cry dash /  mutant are tested at CT 4 and CT 16.,,,WT group 1 at CT 4,WT CT4G1,Unknown BA023 04T0001.fq.gz,,isolate:The first group of WT fish collected at CT 4.|age:120 hpf|collection date:2023 06 10|geo loc name:China:Suzhou|sex:not determined|tissue:larvae|biomaterial provider:Han Wang|birth date:2023 06 05|genotype:wildtype|health state:Health|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Danio rerio: larvae,Unknown BA023 04T0001.fq.gz,Unknown BA023 04T0001.fq.gz,CT4 WT group1,,,RNA-Seq,TRANSCRIPTOMIC,size fractionation,PAIRED,ILLUMINA,HiSeq X Five,,SRP497569,,,Unknown_BA023-04T0001_good_2.fq.gz Unknown_BA023-04T0001_good_1.fq.gz,fastq fastq,7360015710.0,24625447.0,Unknown BA023 04T0001 good 1.fq.gz,0:149.44 1:149.44,A:1931324589;C:1743134275;G:1748699685;T:1936672740;N:184421,149,149,,,1931324589,1743134275,1748699685,1936672740,184421,SRX24039250,SRS20832024,SRA1832685,Soochow University|School of Biology & Basic Medical Sciences,Soochow University,2,0.954,0.95301,0.08257,0.08182,0.66772,0.66906,0.47505,0.47577,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,size_fractionation,unknown,bulk,unknown,unknown,,Unknown,2024-03-25,Larval,Larval,Undetermined,Undetermined