rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 29575,SRR27387418,SRX23063709,SRS20023731,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Combined Intestine,combined intestine 6,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:combined intestine replicate6|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T8 6,T8 6,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A54_1.fastq.gz A54_2.fastq.gz,fastq fastq,8459790000.0,28199300.0,A54 1.fastq.gz,0:150 1:150,A:2287135948;C:1957145280;G:1959338891;T:2256075943;N:93938,150,150,,,2287135948,1957145280,1959338891,2256075943,93938,SRX23063709,SRS20023731,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92583,0.92422,0.06345,0.06263,0.75718,0.75757,0.52145,0.5361,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29576,SRR27387419,SRX23063708,SRS20023730,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Combined Intestine,combined intestine 5,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:combined intestine replicate5|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T8 5,T8 5,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A53_1.fastq.gz A53_2.fastq.gz,fastq fastq,8302022700.0,27673409.0,A53 1.fastq.gz,0:150 1:150,A:2241277601;C:1925048164;G:1920142999;T:2215462687;N:91249,150,150,,,2241277601,1925048164,1920142999,2215462687,91249,SRX23063708,SRS20023730,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92711,0.92566,0.06314,0.06353,0.75221,0.75219,0.541,0.53579,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29577,SRR27387420,SRX23063707,SRS20023729,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Combined Intestine,combined intestine 4,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:combined intestine replicate4|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T8 4,T8 4,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A49_1.fastq.gz A49_2.fastq.gz,fastq fastq,6939976800.0,23133256.0,A49 1.fastq.gz,0:150 1:150,A:1895013575;C:1589528661;G:1585890890;T:1869466351;N:77323,150,150,,,1895013575,1589528661,1585890890,1869466351,77323,SRX23063707,SRS20023729,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92632,0.92542,0.06323,0.06265,0.75588,0.75722,0.55002,0.55324,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29578,SRR27387421,SRX23063706,SRS20023728,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Combined Intestine,combined intestine 3,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:combined intestine replicate3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T8 3,T8 3,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A44_1.fastq.gz A44_2.fastq.gz,fastq fastq,9116379900.0,30387933.0,A44 1.fastq.gz,0:150 1:150,A:2462347514;C:2113718621;G:2112401730;T:2427812186;N:99849,150,150,,,2462347514,2113718621,2112401730,2427812186,99849,SRX23063706,SRS20023728,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.93154,0.92882,0.06321,0.06277,0.75499,0.75519,0.54224,0.542,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29579,SRR27387422,SRX23063705,SRS20023727,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Combined Intestine,combined intestine 2,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:combined intestine replicate2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T8 2,T8 2,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A43_1.fastq.gz A43_2.fastq.gz,fastq fastq,7681997100.0,25606657.0,A43 1.fastq.gz,0:150 1:150,A:2098281007;C:1758609887;G:1757658923;T:2067364339;N:82944,150,150,,,2098281007,1758609887,1757658923,2067364339,82944,SRX23063705,SRS20023727,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92257,0.92131,0.07154,0.07125,0.74769,0.74712,0.52352,0.51843,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29580,SRR27387423,SRX23063704,SRS20023726,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Combined Intestine,combined intestine 1,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:combined intestine replicate1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T8 1,T8 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A29_1.fastq.gz A29_2.fastq.gz,fastq fastq,8869294500.0,29564315.0,A29 1.fastq.gz,0:150 1:150,A:2411657291;C:2043119196;G:2038118093;T:2376336869;N:63051,150,150,,,2411657291,2043119196,2038118093,2376336869,63051,SRX23063704,SRS20023726,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.9293,0.93157,0.06846,0.06859,0.75138,0.75209,0.54348,0.54178,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29582,SRR27387425,SRX23063702,SRS20023724,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Nanoplastics Intestine,nps intestine 5,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:nps intestine replicate5|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T7 5,T7 5,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A51_1.fastq.gz A51_2.fastq.gz,fastq fastq,8229865500.0,27432885.0,A51 1.fastq.gz,0:150 1:150,A:2239224965;C:1891494000;G:1890511233;T:2208544358;N:90944,150,150,,,2239224965,1891494000,1890511233,2208544358,90944,SRX23063702,SRS20023724,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.9282,0.92676,0.06786,0.06815,0.74566,0.74673,0.54961,0.55067,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29583,SRR27387426,SRX23063701,SRS20023723,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Nanoplastics Intestine,nps intestine 4,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:nps intestine replicate4|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T7 4,T7 4,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A50_1.fastq.gz A50_2.fastq.gz,fastq fastq,8549274300.0,28497581.0,A50 1.fastq.gz,0:150 1:150,A:2321938070;C:1971518879;G:1967040023;T:2288683614;N:93714,150,150,,,2321938070,1971518879,1967040023,2288683614,93714,SRX23063701,SRS20023723,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.93231,0.93126,0.06361,0.06304,0.7527,0.75211,0.48289,0.48336,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29584,SRR27387427,SRX23063700,SRS20023722,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Nanoplastics Intestine,nps intestine 3,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:nps intestine replicate3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T7 3,T7 3,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A48_1.fastq.gz A48_2.fastq.gz,fastq fastq,8065026000.0,26883420.0,A48 1.fastq.gz,0:150 1:150,A:2177870889;C:1870003683;G:1870725132;T:2146337507;N:88789,150,150,,,2177870889,1870003683,1870725132,2146337507,88789,SRX23063700,SRS20023722,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92891,0.92753,0.05842,0.05778,0.71991,0.72009,0.51653,0.51675,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29585,SRR27387428,SRX23063699,SRS20023721,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Nanoplastics Intestine,nps intestine 2,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:nps intestine replicate2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T7 2,T7 2,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A42_1.fastq.gz A42_2.fastq.gz,fastq fastq,8391356700.0,27971189.0,A42 1.fastq.gz,0:150 1:150,A:2247673277;C:1962692430;G:1966871884;T:2214026582;N:92527,150,150,,,2247673277,1962692430,1966871884,2214026582,92527,SRX23063699,SRS20023721,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.93153,0.93045,0.05902,0.05934,0.75424,0.75546,0.548,0.54354,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29586,SRR27387429,SRX23063698,SRS20023720,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Nanoplastics Intestine,nps intestine 1,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:nps intestine replicate1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T7 1,T7 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A31_1.fastq.gz A31_2.fastq.gz,fastq fastq,8236557000.0,27455190.0,A31 1.fastq.gz,0:150 1:150,A:2204148101;C:1929010419;G:1925723147;T:2177582914;N:92419,150,150,,,2204148101,1929010419,1925723147,2177582914,92419,SRX23063698,SRS20023720,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.93739,0.93581,0.06216,0.06176,0.75057,0.75049,0.54176,0.53414,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29587,SRR27387430,SRX23063697,SRS20023719,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,6PPDQ Intestine,6ppdq intestine 6,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:6ppdq intestine replicate6|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T6 6,T6 6,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A56_1.fastq.gz A56_2.fastq.gz,fastq fastq,6435464400.0,21451548.0,A56 1.fastq.gz,0:150 1:150,A:1748400934;C:1486171533;G:1481023797;T:1719795546;N:72590,150,150,,,1748400934,1486171533,1481023797,1719795546,72590,SRX23063697,SRS20023719,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92722,0.92559,0.0729,0.07288,0.74288,0.74343,0.53587,0.52589,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29588,SRR27387431,SRX23063696,SRS20023718,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,6PPDQ Intestine,6ppdq intestine 5,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:6ppdq intestine replicate5|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T6 5,T6 5,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A40_1.fastq.gz A40_2.fastq.gz,fastq fastq,8749914000.0,29166380.0,A40 1.fastq.gz,0:150 1:150,A:2338416402;C:2051360445;G:2055480569;T:2304561447;N:95137,150,150,,,2338416402,2051360445,2055480569,2304561447,95137,SRX23063696,SRS20023718,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.94523,0.9504,0.03896,0.03887,0.80661,0.80728,0.46402,0.45996,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29589,SRR27387432,SRX23063695,SRS20023717,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,6PPDQ Intestine,6ppdq intestine 4,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:6ppdq intestine replicate4|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T6 4,T6 4,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A39_1.fastq.gz A39_2.fastq.gz,fastq fastq,8140938300.0,27136461.0,A39 1.fastq.gz,0:150 1:150,A:2198617601;C:1888830697;G:1887283102;T:2166117857;N:89043,150,150,,,2198617601,1888830697,1887283102,2166117857,89043,SRX23063695,SRS20023717,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92636,0.92532,0.05883,0.0588,0.71689,0.71593,0.52397,0.5214,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29590,SRR27387433,SRX23063694,SRS20023716,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,6PPDQ Intestine,6ppdq intestine 3,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:6ppdq intestine replicate3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T6 3,T6 3,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A35_1.fastq.gz A35_2.fastq.gz,fastq fastq,6912319200.0,23041064.0,A35 1.fastq.gz,0:150 1:150,A:1895216825;C:1576630157;G:1574441195;T:1865953455;N:77568,150,150,,,1895216825,1576630157,1574441195,1865953455,77568,SRX23063694,SRS20023716,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92983,0.92816,0.072,0.07173,0.76601,0.76615,0.55997,0.55562,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29591,SRR27387434,SRX23063693,SRS20023715,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,6PPDQ Intestine,6ppdq intestine 2,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:6ppdq intestine replicate2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T6 2,T6 2,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A34_1.fastq.gz A34_2.fastq.gz,fastq fastq,7279802100.0,24266007.0,A34 1.fastq.gz,0:150 1:150,A:1989158951;C:1663891494;G:1668311413;T:1958359476;N:80766,150,150,,,1989158951,1663891494,1668311413,1958359476,80766,SRX23063693,SRS20023715,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92923,0.92655,0.06821,0.068,0.74042,0.74128,0.54366,0.54276,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29593,SRR27387436,SRX23063691,SRS20023713,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,6PPDQ Intestine,6ppdq intestine 1,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:6ppdq intestine replicate1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T6 1,T6 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A30_1.fastq.gz A30_2.fastq.gz,fastq fastq,7219947600.0,24066492.0,A30 1.fastq.gz,0:150 1:150,A:1901354175;C:1717600917;G:1716606554;T:1884305293;N:80661,150,150,,,1901354175,1717600917,1716606554,1884305293,80661,SRX23063691,SRS20023713,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.93375,0.93214,0.05513,0.05567,0.74759,0.74698,0.5475,0.54855,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29594,SRR27387437,SRX23063690,SRS20023712,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Control Intestine,control intestine 6,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:control intestine replicate6|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T5 6,T5 6,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A46_1.fastq.gz A46_2.fastq.gz,fastq fastq,8509361100.0,28364537.0,A46 1.fastq.gz,0:150 1:150,A:2341600956;C:1932495972;G:1930461855;T:2304710926;N:91391,150,150,,,2341600956,1932495972,1930461855,2304710926,91391,SRX23063690,SRS20023712,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92542,0.92408,0.07033,0.06986,0.77234,0.77199,0.55246,0.55942,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29595,SRR27387438,SRX23063689,SRS20023711,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Control Intestine,control intestine 5,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:control intestine replicate5|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T5 5,T5 5,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A45_1.fastq.gz A45_2.fastq.gz,fastq fastq,7856294100.0,26187647.0,A45 1.fastq.gz,0:150 1:150,A:2129077180;C:1813666476;G:1813868805;T:2099595491;N:86148,150,150,,,2129077180,1813666476,1813868805,2099595491,86148,SRX23063689,SRS20023711,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.93087,0.92866,0.06398,0.06358,0.75481,0.75597,0.55424,0.55289,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29596,SRR27387439,SRX23063688,SRS20023710,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Control Intestine,control intestine 4,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:control intestine replicate4|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T5 4,T5 4,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A38_1.fastq.gz A38_2.fastq.gz,fastq fastq,8039208600.0,26797362.0,A38 1.fastq.gz,0:150 1:150,A:2201215819;C:1836215616;G:1833348507;T:2168337651;N:91007,150,150,,,2201215819,1836215616,1833348507,2168337651,91007,SRX23063688,SRS20023710,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.9219,0.91957,0.0702,0.06947,0.76343,0.76493,0.55355,0.54863,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29597,SRR27387440,SRX23063687,SRS20023709,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Control Intestine,control intestine 3,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:control intestine replicate3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T5 3,T5 3,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A37_1.fastq.gz A37_2.fastq.gz,fastq fastq,8253642600.0,27512142.0,A37 1.fastq.gz,0:150 1:150,A:2254958000;C:1889478281;G:1886099650;T:2223014303;N:92366,150,150,,,2254958000,1889478281,1886099650,2223014303,92366,SRX23063687,SRS20023709,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92632,0.92477,0.06268,0.06279,0.76719,0.76682,0.53773,0.53566,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29598,SRR27387441,SRX23063686,SRS20023708,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Control Intestine,control intestine 2,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:control intestine replicate2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T5 2,T5 2,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A33_1.fastq.gz A33_2.fastq.gz,fastq fastq,8276959500.0,27589865.0,A33 1.fastq.gz,0:150 1:150,A:2244800716;C:1909951370;G:1909130637;T:2212988991;N:87786,150,150,,,2244800716,1909951370,1909130637,2212988991,87786,SRX23063686,SRS20023708,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.93248,0.93089,0.06402,0.06475,0.701,0.7012,0.53585,0.53722,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 29599,SRR27387442,SRX23063685,SRS20023707,SRP480720,PRJNA1059246,Mixture toxicity of 6PPD quinone and polystyrene nanoplastics in zebrafish,PRJNA1059246,Other,Tyre wear particles are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves TWPs contain many harmful chemicals including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD quinone which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with thecombined toxicity of nanoplastics and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish. However we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial post co exposure with PSNPs. The more pronounced toxic response in coexposed zebrafish was also observed at the transcriptomic level. KEGG pathways analysis identified mitochondrial dysfunction in the intestine and metabolic disturbances in the liver. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq.,,,,Control Intestine,control intestine 1,,strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:16 weeks|dev stage:adult|sex:male|tissue:intestine|biomaterial provider:not applicable|birth date:not applicable|birth location:not applicable|breeding history:not applicable|breeding method:not applicable|cell line:not applicable|cell subtype:not applicable|cell type:not applicable|collected by:Shubham Varshney|collection date:2023 06|culture collection:not applicable|death date:not applicable|disease:not applicable|disease stg:not applicable|genotype:not applicable|geo loc name:not applicable|growth protocol:not applicable|health state:not applicable|isolation source:not applicable|lat lon:not applicable|phenotype:not applicable|sample type:not applicable|specimen voucher:not applicable|store cond:not applicable|stud book number:not applicable|treatment:control intestine replicate1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,T5 1,T5 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,NextSeq 550,,SRP480720,,,A32_1.fastq.gz A32_2.fastq.gz,fastq fastq,7955418900.0,26518063.0,A32 1.fastq.gz,0:150 1:150,A:2236485440;C:1768380410;G:1765867470;T:2184596828;N:88752,150,150,,,2236485440,1768380410,1765867470,2184596828,88752,SRX23063685,SRS20023707,SRA1777576,Nord University|Faculty of Biosciences and Aquaculture,Nord University,2,0.92662,0.92301,0.071,0.07061,0.75207,0.75158,0.53095,0.54507,150,150,B,B,biological fallback assumption,illumina,nextseq,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-12-30,Adult,Adult,Gut,Digestive System 55951,SRR10827995,SRX7501389,SRS5942789,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR011,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate10|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR011,ZR011,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR011_S00_L009_R2_001.fastq.gz lane9-ZR011_S00_L009_R1_001.fastq.gz,fastq fastq,9665147298.0,32003799.0,lane9 ZR011 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2665223251;C:2186863125;G:2211599706;T:2600518585;N:942631,151,151,,,2665223251,2186863125,2211599706,2600518585,942631,SRX7501389,SRS5942789,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.85775,0.85388,0.06267,0.06297,0.78766,0.79097,0.54825,0.54162,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55952,SRR10827996,SRX7501388,SRS5942788,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR010,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate9|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR010,ZR010,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR010_S00_L009_R2_001.fastq.gz lane9-ZR010_S00_L009_R1_001.fastq.gz,fastq fastq,10313891618.0,34151959.0,lane9 ZR010 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2810497988;C:2363542718;G:2386667646;T:2752188319;N:994947,151,151,,,2810497988,2363542718,2386667646,2752188319,994947,SRX7501388,SRS5942788,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.86439,0.85421,0.05536,0.05624,0.78378,0.78847,0.5643,0.5428,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55953,SRR10827997,SRX7501387,SRS5942787,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR009,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate8|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR009,ZR009,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR009_S00_L009_R2_001.fastq.gz lane9-ZR009_S00_L009_R1_001.fastq.gz,fastq fastq,8998700946.0,29797023.0,lane9 ZR009 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2553315628;C:1959457429;G:1980318504;T:2504726656;N:882729,151,151,,,2553315628,1959457429,1980318504,2504726656,882729,SRX7501387,SRS5942787,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.80444,0.8015,0.08208,0.08274,0.78634,0.78813,0.56791,0.56822,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55954,SRR10827998,SRX7501386,SRS5942786,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR008,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate7|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR008,ZR008,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR008_S00_L009_R1_001.fastq.gz lane9-ZR008_S00_L009_R2_001.fastq.gz,fastq fastq,9206500200.0,30485100.0,lane9 ZR008 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2571733836;C:2048238935;G:2081481702;T:2504158985;N:886742,151,151,,,2571733836,2048238935,2081481702,2504158985,886742,SRX7501386,SRS5942786,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.84315,0.84243,0.06679,0.068,0.79026,0.79263,0.54865,0.52814,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55955,SRR10827999,SRX7501385,SRS5942785,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR006,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate6|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR006,ZR006,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR006_S00_L009_R1_001.fastq.gz lane9-ZR006_S00_L009_R2_001.fastq.gz,fastq fastq,9469616190.0,31356345.0,lane9 ZR006 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2598567090;C:2156360016;G:2166235031;T:2547531313;N:922740,151,151,,,2598567090,2156360016,2166235031,2547531313,922740,SRX7501385,SRS5942785,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.86997,0.86634,0.06206,0.06323,0.7853,0.7877,0.5039,0.48672,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55956,SRR10828000,SRX7501384,SRS5942783,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR005,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate5|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR005,ZR005,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR005_S00_L009_R1_001.fastq.gz lane9-ZR005_S00_L009_R2_001.fastq.gz,fastq fastq,8265125732.0,27367966.0,lane9 ZR005 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2271031367;C:1878130541;G:1893994523;T:2221168810;N:800491,151,151,,,2271031367,1878130541,1893994523,2221168810,800491,SRX7501384,SRS5942783,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.87646,0.7655,0.06913,0.06038,0.79401,0.80915,0.54875,0.54807,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55957,SRR10828001,SRX7501383,SRS5942784,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR004,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate4|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR004,ZR004,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR004_S00_L009_R1_001.fastq.gz lane9-ZR004_S00_L009_R2_001.fastq.gz,fastq fastq,9015407586.0,29852343.0,lane9 ZR004 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2508921769;C:2018051929;G:2030281337;T:2457279135;N:873416,151,151,,,2508921769,2018051929,2030281337,2457279135,873416,SRX7501383,SRS5942784,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.84988,0.83488,0.06628,0.06644,0.77344,0.77843,0.55247,0.5423,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55958,SRR10828002,SRX7501382,SRS5942782,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR022,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate21|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR022,ZR022,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR022_S00_L009_R1_001.fastq.gz lane9-ZR022_S00_L009_R2_001.fastq.gz,fastq fastq,13741876102.0,45502901.0,lane9 ZR022 S00 L009 R1 001.fastq.gz,0:151 1:151,A:3931077197;C:2931142966;G:2955027469;T:3923313652;N:1314818,151,151,,,3931077197,2931142966,2955027469,3923313652,1314818,SRX7501382,SRS5942782,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.88334,0.87862,0.09332,0.09391,0.77711,0.78113,0.55947,0.54508,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55959,SRR10828003,SRX7501381,SRS5942781,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR003,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate3|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR003,ZR003,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR003_S00_L009_R1_001.fastq.gz lane9-ZR003_S00_L009_R2_001.fastq.gz,fastq fastq,11201243420.0,37090210.0,lane9 ZR003 S00 L009 R1 001.fastq.gz,0:151 1:151,A:3127283035;C:2496207030;G:2513262555;T:3063404560;N:1086240,151,151,,,3127283035,2496207030,2513262555,3063404560,1086240,SRX7501381,SRS5942781,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.86792,0.8632,0.06784,0.06862,0.78867,0.79308,0.53988,0.52892,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55960,SRR10828004,SRX7501380,SRS5942780,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR021,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate20|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR021,ZR021,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR021_S00_L009_R1_001.fastq.gz lane9-ZR021_S00_L009_R2_001.fastq.gz,fastq fastq,10099985924.0,33443662.0,lane9 ZR021 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2774168141;C:2288982049;G:2309143011;T:2726709515;N:983208,151,151,,,2774168141,2288982049,2309143011,2726709515,983208,SRX7501380,SRS5942780,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.86982,0.86834,0.07188,0.07308,0.78717,0.78987,0.5574,0.5503,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55961,SRR10828005,SRX7501379,SRS5942779,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR020,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate19|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR020,ZR020,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR020_S00_L009_R1_001.fastq.gz lane9-ZR020_S00_L009_R2_001.fastq.gz,fastq fastq,10454972428.0,34619114.0,lane9 ZR020 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2839651351;C:2416116684;G:2429373737;T:2768795024;N:1035632,151,151,,,2839651351,2416116684,2429373737,2768795024,1035632,SRX7501379,SRS5942779,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.86093,0.86611,0.03397,0.03484,0.83104,0.83327,0.30434,0.30026,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55962,SRR10828006,SRX7501378,SRS5942778,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR019,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate18|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR019,ZR019,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR019_S00_L009_R2_001.fastq.gz lane9-ZR019_S00_L009_R1_001.fastq.gz,fastq fastq,10719453458.0,35494879.0,lane9 ZR019 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2914826334;C:2463706695;G:2484150600;T:2855735087;N:1034742,151,151,,,2914826334,2463706695,2484150600,2855735087,1034742,SRX7501378,SRS5942778,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.87668,0.87454,0.05478,0.05538,0.78884,0.7906,0.53897,0.5064,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55963,SRR10828007,SRX7501377,SRS5942777,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR018,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate17|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR018,ZR018,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR018_S00_L009_R1_001.fastq.gz lane9-ZR018_S00_L009_R2_001.fastq.gz,fastq fastq,6358250620.0,21053810.0,lane9 ZR018 S00 L009 R1 001.fastq.gz,0:151 1:151,A:1669813509;C:1524057927;G:1530947497;T:1632824279;N:607408,151,151,,,1669813509,1524057927,1530947497,1632824279,607408,SRX7501377,SRS5942777,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.89698,0.89547,0.05683,0.05916,0.81848,0.82089,0.56455,0.54732,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55964,SRR10828008,SRX7501376,SRS5942776,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR017,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate16|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR017,ZR017,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR017_S00_L009_R1_001.fastq.gz lane9-ZR017_S00_L009_R2_001.fastq.gz,fastq fastq,8141425324.0,26958362.0,lane9 ZR017 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2210048052;C:1874541787;G:1892972101;T:2163066000;N:797384,151,151,,,2210048052,1874541787,1892972101,2163066000,797384,SRX7501376,SRS5942776,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.8799,0.75762,0.05488,0.04911,0.78587,0.80105,0.5506,0.52986,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55965,SRR10828009,SRX7501375,SRS5942775,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR016,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate15|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR016,ZR016,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR016_S00_L009_R1_001.fastq.gz lane9-ZR016_S00_L009_R2_001.fastq.gz,fastq fastq,6614210116.0,21901358.0,lane9 ZR016 S00 L009 R1 001.fastq.gz,0:151 1:151,A:1784851559;C:1535505997;G:1547676414;T:1745543179;N:632967,151,151,,,1784851559,1535505997,1547676414,1745543179,632967,SRX7501375,SRS5942775,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.90312,0.89783,0.0713,0.07131,0.79127,0.79579,0.54495,0.54771,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55966,SRR10828010,SRX7501374,SRS5942774,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR015,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate14|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR015,ZR015,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR015_S00_L009_R1_001.fastq.gz lane9-ZR015_S00_L009_R2_001.fastq.gz,fastq fastq,11286865554.0,37373727.0,lane9 ZR015 S00 L009 R1 001.fastq.gz,0:151 1:151,A:3141361472;C:2517784036;G:2559469326;T:3067139151;N:1111569,151,151,,,3141361472,2517784036,2559469326,3067139151,1111569,SRX7501374,SRS5942774,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.83638,0.834,0.06549,0.06651,0.78305,0.78524,0.55623,0.54699,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55967,SRR10828011,SRX7501373,SRS5942773,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR014,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate13|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR014,ZR014,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR014_S00_L009_R1_001.fastq.gz lane9-ZR014_S00_L009_R2_001.fastq.gz,fastq fastq,7845860038.0,25979669.0,lane9 ZR014 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2154729734;C:1778438216;G:1807077828;T:2104855748;N:758512,151,151,,,2154729734,1778438216,1807077828,2104855748,758512,SRX7501373,SRS5942773,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.86906,0.86569,0.06254,0.06319,0.78886,0.79336,0.54972,0.51512,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55968,SRR10828012,SRX7501372,SRS5942772,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR013,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate12|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR013,ZR013,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR013_S00_L009_R1_001.fastq.gz lane9-ZR013_S00_L009_R2_001.fastq.gz,fastq fastq,6510195276.0,21556938.0,lane9 ZR013 S00 L009 R1 001.fastq.gz,0:151 1:151,A:1814210714;C:1453505783;G:1467029872;T:1774830373;N:618534,151,151,,,1814210714,1453505783,1467029872,1774830373,618534,SRX7501372,SRS5942772,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.85325,0.85017,0.06548,0.06721,0.79815,0.79939,0.55953,0.53689,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55969,SRR10828013,SRX7501371,SRS5942771,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR012,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate11|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR012,ZR012,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR012_S00_L009_R1_001.fastq.gz lane9-ZR012_S00_L009_R2_001.fastq.gz,fastq fastq,6797139368.0,22507084.0,lane9 ZR012 S00 L009 R1 001.fastq.gz,0:151 1:151,A:1862619574;C:1544924953;G:1561143823;T:1827800623;N:650395,151,151,,,1862619574,1544924953,1561143823,1827800623,650395,SRX7501371,SRS5942771,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.87394,0.86984,0.05857,0.05973,0.78267,0.78535,0.56602,0.53678,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55970,SRR10828014,SRX7501370,SRS5942769,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR002,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate2|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR002,ZR002,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR002_S00_L009_R1_001.fastq.gz lane9-ZR002_S00_L009_R2_001.fastq.gz,fastq fastq,12048079506.0,39894303.0,lane9 ZR002 S00 L009 R1 001.fastq.gz,0:151 1:151,A:3325434575;C:2709618615;G:2744517142;T:3267339636;N:1169538,151,151,,,3325434575,2709618615,2744517142,3267339636,1169538,SRX7501370,SRS5942769,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.86595,0.86133,0.06795,0.06891,0.79316,0.79711,0.51314,0.50071,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 55971,SRR10828015,SRX7501369,SRS5942770,SRP239446,PRJNA598916,Zebrafish intestinal gene expression,PRJNA598916,Other,An analysis of zebrafish intestinal gene expression,,,,,ZR001,,strain:5D|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|dev stage:Adult|sex:male|tissue:whole intestine|replicate:replicate1|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of Danio rerio: adult 5D intestine,ZR001,ZR001,Illumina Paired end sequencing,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP239446,,,lane9-ZR001_S00_L009_R1_001.fastq.gz lane9-ZR001_S00_L009_R2_001.fastq.gz,fastq fastq,8481414206.0,28084153.0,lane9 ZR001 S00 L009 R1 001.fastq.gz,0:151 1:151,A:2392757541;C:1869273565;G:1884123300;T:2334437148;N:822652,151,151,,,2392757541,1869273565,1884123300,2334437148,822652,SRX7501369,SRS5942770,SRA1020118,Oregon State University|Microbiology,Oregon State University,2,0.79806,0.66202,0.06966,0.05946,0.7809,0.79849,0.52853,0.52572,151,151,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,United States,2020-01-04,Adult,Adult,Gut,Digestive System 68333,SRR17714676,SRX13877733,SRS11747906,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,KO in 4,,strain:AB type|isolate:knockout|breed:KO in 4|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,KO in 4,KO in 4,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_KO-in-4_good_1.fq.gz Daniorerio_KO-in-4_good_2.fq.gz,fastq fastq,8086373448.0,27114595.0,Daniorerio KO in 4 good 1.fq.gz,0:149.11 1:149.11,A:2114635166;C:1908498639;G:1940373806;T:2122462453;N:403384,149,149,,,2114635166,1908498639,1940373806,2122462453,403384,SRX13877733,SRS11747906,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.93003,0.92992,0.06176,0.06188,0.70163,0.70429,0.48922,0.48903,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68334,SRR17714677,SRX13877732,SRS11747905,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,KO in 3,,strain:AB type|isolate:knockout|breed:KO in 3|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,KO in 3,KO in 3,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_KO-in-3_good_1.fq.gz Daniorerio_KO-in-3_good_2.fq.gz,fastq fastq,7347019970.0,24569878.0,Daniorerio KO in 3 good 1.fq.gz,0:149.51 1:149.51,A:1946037694;C:1706069195;G:1743974411;T:1950573440;N:365230,149,149,,,1946037694,1706069195,1743974411,1950573440,365230,SRX13877732,SRS11747905,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.92803,0.92694,0.07821,0.07735,0.73367,0.73438,0.51472,0.52472,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68335,SRR17714678,SRX13877731,SRS11747903,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,KO in 2,,strain:AB type|isolate:knockout|breed:KO in 2|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,KO in 2,KO in 2,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_KO-in-2_good_1.fq.gz Daniorerio_KO-in-2_good_2.fq.gz,fastq fastq,8301032318.0,27790678.0,Daniorerio KO in 2 good 1.fq.gz,0:149.35 1:149.35,A:2179637699;C:1945190004;G:1982782844;T:2193010761;N:411010,149,149,,,2179637699,1945190004,1982782844,2193010761,411010,SRX13877731,SRS11747903,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.94456,0.9438,0.04849,0.04881,0.77191,0.77333,0.36067,0.3652,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68344,SRR17714687,SRX13877722,SRS11747895,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,KO in 1,,strain:AB type|isolate:knockout|breed:KO in 1|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,KO in 1,KO in 1,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_KO-in-1_good_1.fq.gz Daniorerio_KO-in-1_good_2.fq.gz,fastq fastq,7827900066.0,26180712.0,Daniorerio KO in 1 good 1.fq.gz,0:149.50 1:149.50,A:2080601651;C:1809785147;G:1846482300;T:2090643065;N:387903,149,149,,,2080601651,1809785147,1846482300,2090643065,387903,SRX13877722,SRS11747895,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.92406,0.92332,0.08136,0.08064,0.72596,0.72541,0.51544,0.52064,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68345,SRR17714688,SRX13877721,SRS11747893,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,WT in 7,,strain:AB type|isolate:wild type|breed:WT in 7|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,WT in 7,WT in 7,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_WT-in-7_good_1.fq.gz Daniorerio_WT-in-7_good_2.fq.gz,fastq fastq,6525605248.0,21813313.0,Daniorerio WT in 7 good 1.fq.gz,0:149.58 1:149.58,A:1779067091;C:1469759022;G:1500273479;T:1776177556;N:328100,149,149,,,1779067091,1469759022,1500273479,1776177556,328100,SRX13877721,SRS11747893,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.90976,0.90971,0.08435,0.08468,0.72709,0.7289,0.5376,0.53733,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68346,SRR17714689,SRX13877720,SRS11747894,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,WT in 4,,strain:AB type|isolate:wild type|breed:WT in 4|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,WT in 4,WT in 4,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_WT-in-4_good_1.fq.gz Daniorerio_WT-in-4_good_2.fq.gz,fastq fastq,9307471244.0,31204763.0,Daniorerio WT in 4 good 1.fq.gz,0:149.14 1:149.14,A:2485339643;C:2146056187;G:2184301247;T:2491310160;N:464007,149,149,,,2485339643,2146056187,2184301247,2491310160,464007,SRX13877720,SRS11747894,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.93125,0.9303,0.08758,0.08737,0.72042,0.72066,0.50621,0.50241,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68347,SRR17714690,SRX13877719,SRS11747892,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,WT in 2,,strain:AB type|isolate:wild type|breed:WT in 2|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,WT in 2,WT in 2,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_WT-in-2_good_1.fq.gz Daniorerio_WT-in-2_good_2.fq.gz,fastq fastq,7284861540.0,24415394.0,Daniorerio WT in 2 good 1.fq.gz,0:149.19 1:149.19,A:1956983508;C:1672191117;G:1698929394;T:1956391871;N:365650,149,149,,,1956983508,1672191117,1698929394,1956391871,365650,SRX13877719,SRS11747892,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.92731,0.92546,0.09355,0.09268,0.73125,0.7317,0.53578,0.51601,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68348,SRR17714691,SRX13877718,SRS11747890,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,WT in 1,,strain:AB type|isolate:wild type|breed:WT in 1|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,WT in 1,WT in 1,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_WT-in-1_good_1.fq.gz Daniorerio_WT-in-1_good_2.fq.gz,fastq fastq,6846412620.0,22924105.0,Daniorerio WT in 1 good 1.fq.gz,0:149.33 1:149.33,A:1885463202;C:1523755204;G:1559518207;T:1877335306;N:340701,149,149,,,1885463202,1523755204,1559518207,1877335306,340701,SRX13877718,SRS11747890,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.92598,0.92418,0.11749,0.1172,0.7124,0.71287,0.52007,0.52208,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68362,SRR17714705,SRX13877704,SRS11747876,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,MU in 4,,strain:AB type|isolate:point mutation|breed:MU in 4|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,MU in 4,MU in 4,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_MU-in-4_good_1.fq.gz Daniorerio_MU-in-4_good_2.fq.gz,fastq fastq,6981292910.0,23353513.0,Daniorerio MU in 4 good 1.fq.gz,0:149.47 1:149.47,A:1918651893;C:1556487274;G:1587959315;T:1917844487;N:349941,149,149,,,1918651893,1556487274,1587959315,1917844487,349941,SRX13877704,SRS11747876,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.90619,0.90539,0.10392,0.10257,0.72581,0.7262,0.50279,0.51648,115,115,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68363,SRR17714706,SRX13877703,SRS11747877,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,MU in 3,,strain:AB type|isolate:point mutation|breed:MU in 3|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,MU in 3,MU in 3,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_MU-in-3_good_1.fq.gz Daniorerio_MU-in-3_good_2.fq.gz,fastq fastq,6927732356.0,23196580.0,Daniorerio MU in 3 good 1.fq.gz,0:149.33 1:149.33,A:1882979804;C:1564547441;G:1599806601;T:1880055787;N:342723,149,149,,,1882979804,1564547441,1599806601,1880055787,342723,SRX13877703,SRS11747877,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.92662,0.92461,0.09213,0.09138,0.70325,0.70512,0.49198,0.48956,128,128,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68364,SRR17714707,SRX13877702,SRS11747875,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,MU in 2,,strain:AB type|isolate:point mutation|breed:MU in 2|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,MU in 2,MU in 2,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_MU-in-2_good_1.fq.gz Daniorerio_MU-in-2_good_2.fq.gz,fastq fastq,5935464130.0,19846848.0,Daniorerio MU in 2 good 1.fq.gz,0:149.53 1:149.53,A:1636475982;C:1319113428;G:1341190439;T:1638386007;N:298274,149,149,,,1636475982,1319113428,1341190439,1638386007,298274,SRX13877702,SRS11747875,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.92398,0.92343,0.10356,0.10369,0.71875,0.71999,0.51404,0.52599,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 68365,SRR17714708,SRX13877701,SRS11747874,SRP356388,PRJNA799842,RNA seq of CRISPR/Cas9 mediated genome editing zebrafishes; the alligator pipefish spleen and the small white organ of the lined seahorse.,PRJNA799842,Other,To explore the function of the gene in spleen development we generated a knockout zebrafish line. To investigate whether the phenotypic consequences in the seahorses were caused by a missense mutation in this gene we generated a point mutation zebrafish line by CRISPR/Cas9 mediated homologous recombination HR. RNA seq of these samples tissues brain liver kidney and intestine were analyzed. In addition to clarify the splenic phenotype of the Syngnathidaes the transcriptomic profiles of the S. biaculeatus spleens and the H. erectus small white organ were also sampled and sequenced.,,,,,MU in 1,,strain:AB type|isolate:point mutation|breed:MU in 1|age:3 month|dev stage:NA|sex:NA|tissue:intestine|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,MU in 1,MU in 1,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP356388,,loader:fastq load.py,Daniorerio_MU-in-1_good_1.fq.gz Daniorerio_MU-in-1_good_2.fq.gz,fastq fastq,6216034614.0,20807316.0,Daniorerio MU in 1 good 1.fq.gz,0:149.37 1:149.37,A:1699351968;C:1392852246;G:1422263891;T:1701253575;N:312934,149,149,,,1699351968,1392852246,1422263891,1701253575,312934,SRX13877701,SRS11747874,SRA1360632,South China Sea Institute of Oceanology|CAS Key Laboratory of Tropical Marine Bio-Resource,South China Sea Institute of Oceanology,2,0.92907,0.92796,0.08789,0.0879,0.73277,0.73415,0.53788,0.53553,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2022-01-27,Adult,Adult,Gut,Digestive System 71924,SRR22163283,SRX18142185,SRS15643653,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,CT5 1,,Treatment:Treatment 1|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S1 5 1,S1 5 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S1_5_1.fq.gz S1_5_2.fq.gz,fastq fastq,9014027400.0,30046758.0,S1 5 1.fq.gz,0:150 1:150,A:2459911620;C:2065534063;G:2054316794;T:2434183063;N:81860,150,150,,,2459911620,2065534063,2054316794,2434183063,81860,SRX18142185,SRS15643653,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93772,0.93725,0.08092,0.08041,0.70832,0.70978,0.53684,0.53606,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71925,SRR22163284,SRX18142184,SRS15643652,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,CT4 1,,Treatment:Treatment 1|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S1 4 1,S1 4 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S1_4_1.fq.gz S1_4_2.fq.gz,fastq fastq,6553685700.0,21845619.0,S1 4 1.fq.gz,0:150 1:150,A:1784449261;C:1498869080;G:1499429078;T:1770878702;N:59579,150,150,,,1784449261,1498869080,1499429078,1770878702,59579,SRX18142184,SRS15643652,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93877,0.93743,0.08244,0.08155,0.739,0.74097,0.52274,0.52625,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71926,SRR22163285,SRX18142183,SRS15643651,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AH4 1,,Treatment:Treatment 5|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S5 4 1,S5 4 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S5_4_1.fq.gz S5_4_2.fq.gz,fastq fastq,7564526100.0,25215087.0,S5 4 1.fq.gz,0:150 1:150,A:2043866713;C:1743444091;G:1745247877;T:2031898136;N:69283,150,150,,,2043866713,1743444091,1745247877,2031898136,69283,SRX18142183,SRS15643651,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94099,0.94529,0.0771,0.07756,0.73265,0.73257,0.52445,0.52332,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71927,SRR22163286,SRX18142182,SRS15643650,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AH5 1,,Treatment:Treatment 5|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S5 5 1,S5 5 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S5_5_1.fq.gz S5_5_2.fq.gz,fastq fastq,6818647200.0,22728824.0,S5 5 1.fq.gz,0:150 1:150,A:1846393621;C:1567500825;G:1568719933;T:1835970147;N:62674,150,150,,,1846393621,1567500825,1568719933,1835970147,62674,SRX18142182,SRS15643650,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94615,0.94579,0.07548,0.07515,0.73914,0.73951,0.51532,0.52598,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71928,SRR22163287,SRX18142181,SRS15643649,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AH3 1,,Treatment:Treatment 5|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S5 3 1,S5 3 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S5_3_1.fq.gz S5_3_2.fq.gz,fastq fastq,6450337200.0,21501124.0,S5 3 1.fq.gz,0:150 1:150,A:1752617470;C:1478462961;G:1484526083;T:1734611899;N:118787,150,150,,,1752617470,1478462961,1484526083,1734611899,118787,SRX18142181,SRS15643649,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93335,0.93224,0.07956,0.07894,0.72825,0.72738,0.5346,0.52833,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71929,SRR22163288,SRX18142180,SRS15643648,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AH2 1,,Treatment:Treatment 5|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S5 2 1,S5 2 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S5_2_1.fq.gz S5_2_2.fq.gz,fastq fastq,5986383600.0,19954612.0,S5 2 1.fq.gz,0:150 1:150,A:1622252024;C:1375497551;G:1378093904;T:1610485009;N:55112,150,150,,,1622252024,1375497551,1378093904,1610485009,55112,SRX18142180,SRS15643648,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93679,0.93393,0.0838,0.08262,0.73133,0.73217,0.51866,0.52392,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71930,SRR22163289,SRX18142179,SRS15643647,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AH1 1,,Treatment:Treatment 5|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S5 1 1,S5 1 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S5_1_1.fq.gz S5_1_2.fq.gz,fastq fastq,6704247600.0,22347492.0,S5 1 1.fq.gz,0:150 1:150,A:1803831988;C:1551064976;G:1554658726;T:1794631530;N:60380,150,150,,,1803831988,1551064976,1554658726,1794631530,60380,SRX18142179,SRS15643647,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.9388,0.93573,0.0764,0.07588,0.72997,0.73198,0.50984,0.51677,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71931,SRR22163290,SRX18142178,SRS15643646,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,CT3 1,,Treatment:Treatment 1|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S1 3 1,S1 3 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S1_3_1.fq.gz S1_3_2.fq.gz,fastq fastq,6881200500.0,22937335.0,S1 3 1.fq.gz,0:150 1:150,A:1873669495;C:1570999744;G:1573967835;T:1862499052;N:64374,150,150,,,1873669495,1570999744,1573967835,1862499052,64374,SRX18142178,SRS15643646,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93463,0.93369,0.08182,0.08073,0.73062,0.73109,0.53022,0.53398,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71932,SRR22163291,SRX18142177,SRS15643645,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AL5 1,,Treatment:Treatment 4|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S4 5 1,S4 5 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S4_5_1.fq.gz S4_5_2.fq.gz,fastq fastq,6906950400.0,23023168.0,S4 5 1.fq.gz,0:150 1:150,A:1875574271;C:1581055857;G:1590654807;T:1859555877;N:109588,150,150,,,1875574271,1581055857,1590654807,1859555877,109588,SRX18142177,SRS15643645,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93012,0.93082,0.08039,0.08038,0.72876,0.72766,0.50636,0.51384,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71933,SRR22163292,SRX18142176,SRS15643644,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AL4 1,,Treatment:Treatment 4|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S4 4 1,S4 4 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S4_4_1.fq.gz S4_4_2.fq.gz,fastq fastq,6913366800.0,23044556.0,S4 4 1.fq.gz,0:150 1:150,A:1903542067;C:1564730705;G:1563720683;T:1881239696;N:133649,150,150,,,1903542067,1564730705,1563720683,1881239696,133649,SRX18142176,SRS15643644,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93819,0.93814,0.08097,0.08049,0.73864,0.73803,0.52461,0.51972,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71934,SRR22163293,SRX18142175,SRS15643643,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AL3 1,,Treatment:Treatment 4|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S4 3 1,S4 3 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S4_3_1.fq.gz S4_3_2.fq.gz,fastq fastq,7190431200.0,23968104.0,S4 3 1.fq.gz,0:150 1:150,A:1952095075;C:1648591963;G:1649351611;T:1940328578;N:63973,150,150,,,1952095075,1648591963,1649351611,1940328578,63973,SRX18142175,SRS15643643,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93582,0.93496,0.08069,0.08067,0.72886,0.72957,0.52625,0.52111,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71935,SRR22163294,SRX18142174,SRS15643642,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AL2 1,,Treatment:Treatment 4|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S4 2 1,S4 2 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S4_2_1.fq.gz S4_2_2.fq.gz,fastq fastq,6831432300.0,22771441.0,S4 2 1.fq.gz,0:150 1:150,A:1845236693;C:1574587408;G:1577738295;T:1833814473;N:55431,150,150,,,1845236693,1574587408,1577738295,1833814473,55431,SRX18142174,SRS15643642,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.9281,0.93072,0.08127,0.08155,0.72947,0.72955,0.50902,0.49335,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71936,SRR22163295,SRX18142173,SRS15643641,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,AL1 1,,Treatment:Treatment 4|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S4 1 1,S4 1 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S4_1_1.fq.gz S4_1_2.fq.gz,fastq fastq,5971778100.0,19905927.0,S4 1 1.fq.gz,0:150 1:150,A:1620005758;C:1371651740;G:1371501168;T:1608565768;N:53666,150,150,,,1620005758,1371651740,1371501168,1608565768,53666,SRX18142173,SRS15643641,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93253,0.93166,0.08427,0.08351,0.72249,0.72206,0.52446,0.52271,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71937,SRR22163296,SRX18142172,SRS15643640,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,BG4 1,,Treatment:Treatment 3|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S3 4 1,S3 4 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S3_4_1.fq.gz S3_4_2.fq.gz,fastq fastq,6473786700.0,21579289.0,S3 4 1.fq.gz,0:150 1:150,A:1748612918;C:1491816166;G:1491960552;T:1741338722;N:58342,150,150,,,1748612918,1491816166,1491960552,1741338722,58342,SRX18142172,SRS15643640,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94269,0.9404,0.07074,0.06953,0.73789,0.73957,0.53497,0.53084,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71938,SRR22163297,SRX18142171,SRS15643639,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,BG5 1,,Treatment:Treatment 3|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S3 5 1,S3 5 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S3_5_1.fq.gz S3_5_2.fq.gz,fastq fastq,6084837000.0,20282790.0,S3 5 1.fq.gz,0:150 1:150,A:1645004103;C:1402281017;G:1405601059;T:1631855984;N:94837,150,150,,,1645004103,1402281017,1405601059,1631855984,94837,SRX18142171,SRS15643639,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93774,0.93575,0.07708,0.07646,0.7377,0.73866,0.53065,0.5251,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71939,SRR22163298,SRX18142170,SRS15643638,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,BG3 1,,Treatment:Treatment 3|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S3 3 1,S3 3 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S3_3_1.fq.gz S3_3_2.fq.gz,fastq fastq,6556379100.0,21854597.0,S3 3 1.fq.gz,0:150 1:150,A:1762889088;C:1519118015;G:1520823814;T:1753488491;N:59692,150,150,,,1762889088,1519118015,1520823814,1753488491,59692,SRX18142170,SRS15643638,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94026,0.93983,0.06924,0.06895,0.73998,0.74144,0.5373,0.53681,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71940,SRR22163299,SRX18142169,SRS15643637,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,BG2 1,,Treatment:Treatment 3|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S3 2 1,S3 2 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S3_2_1.fq.gz S3_2_2.fq.gz,fastq fastq,5974464300.0,19914881.0,S3 2 1.fq.gz,0:150 1:150,A:1654682042;C:1337458286;G:1342575126;T:1639695199;N:53647,150,150,,,1654682042,1337458286,1342575126,1639695199,53647,SRX18142169,SRS15643637,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.92677,0.92934,0.09511,0.09465,0.75124,0.75195,0.5478,0.54496,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71941,SRR22163300,SRX18142168,SRS15643636,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,BG1 1,,Treatment:Treatment 3|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S3 1 1,S3 1 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S3_1_1.fq.gz S3_1_2.fq.gz,fastq fastq,6394236600.0,21314122.0,S3 1 1.fq.gz,0:150 1:150,A:1734112101;C:1468810954;G:1473411956;T:1717788013;N:113576,150,150,,,1734112101,1468810954,1473411956,1717788013,113576,SRX18142168,SRS15643636,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.9416,0.93939,0.07966,0.07909,0.73255,0.73259,0.52819,0.5255,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71942,SRR22163301,SRX18142167,SRS15643635,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,CT2 1,,Treatment:Treatment 1|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S1 2 1,S1 2 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S1_2_1.fq.gz S1_2_2.fq.gz,fastq fastq,6555794700.0,21852649.0,S1 2 1.fq.gz,0:150 1:150,A:1772394034;C:1510456961;G:1510092541;T:1762790687;N:60477,150,150,,,1772394034,1510456961,1510092541,1762790687,60477,SRX18142167,SRS15643635,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94303,0.94265,0.0822,0.08118,0.73641,0.73665,0.52096,0.51558,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71943,SRR22163302,SRX18142166,SRS15643634,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,SBM5 1,,Treatment:Treatment 2|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S2 5 1,S2 5 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S2_5_1.fq.gz S2_5_2.fq.gz,fastq fastq,6855107400.0,22850358.0,S2 5 1.fq.gz,0:150 1:150,A:1869970926;C:1565462968;G:1568115621;T:1851501680;N:56205,150,150,,,1869970926,1565462968,1568115621,1851501680,56205,SRX18142166,SRS15643634,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93659,0.93619,0.08228,0.08122,0.73302,0.73304,0.51953,0.52133,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71944,SRR22163303,SRX18142165,SRS15643633,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,SBM4 1,,Treatment:Treatment 2|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S2 4 1,S2 4 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S2_4_1.fq.gz S2_4_2.fq.gz,fastq fastq,7044015900.0,23480053.0,S2 4 1.fq.gz,0:150 1:150,A:1899828828;C:1624907781;G:1630439306;T:1888776155;N:63830,150,150,,,1899828828,1624907781,1630439306,1888776155,63830,SRX18142165,SRS15643633,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94362,0.94382,0.07511,0.07509,0.72855,0.72837,0.52157,0.53136,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71945,SRR22163304,SRX18142164,SRS15643632,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,SBM3 1,,Treatment:Treatment 2|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S2 3 1,S2 3 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S2_3_1.fq.gz S2_3_2.fq.gz,fastq fastq,6818571600.0,22728572.0,S2 3 1.fq.gz,0:150 1:150,A:1840865477;C:1571915962;G:1578863428;T:1826870329;N:56404,150,150,,,1840865477,1571915962,1578863428,1826870329,56404,SRX18142164,SRS15643632,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93784,0.93642,0.07873,0.07836,0.73054,0.73208,0.52416,0.52365,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71946,SRR22163305,SRX18142163,SRS15643631,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,SBM2 1,,Treatment:Treatment 2|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S2 2 1,S2 2 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S2_2_1.fq.gz S2_2_2.fq.gz,fastq fastq,7034958300.0,23449861.0,S2 2 1.fq.gz,0:150 1:150,A:2003013392;C:1529525297;G:1530185534;T:1972122799;N:111278,150,150,,,2003013392,1529525297,1530185534,1972122799,111278,SRX18142163,SRS15643631,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.91586,0.91663,0.1084,0.10816,0.74136,0.74012,0.51769,0.51712,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71947,SRR22163306,SRX18142162,SRS15643629,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,SBM1 1,,Treatment:Treatment 2|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S2 1 1,S2 1 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S2_1_1.fq.gz S2_1_2.fq.gz,fastq fastq,7116235200.0,23720784.0,S2 1 1.fq.gz,0:150 1:150,A:1941741566;C:1625435455;G:1623746373;T:1925246958;N:64848,150,150,,,1941741566,1625435455,1623746373,1925246958,64848,SRX18142162,SRS15643629,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.9342,0.93247,0.08966,0.0896,0.73089,0.732,0.52389,0.52551,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 71948,SRR22163307,SRX18142161,SRS15643630,SRP405971,PRJNA896758,Anti inflammatory potential of alginates in the zebrafish model of intestinal inflammation,PRJNA896758,Other,In this study we investigated the impact of dietary alginates on the intestinal transcriptomic landscape of the zebrafish model of intestinal inflammation,,,,,CT1 1,,Treatment:Treatment 1|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Saima Rehman|collection date:2022 03|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,S1 1 1,S1 1 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP405971,,,S1_1_1.fq.gz S1_1_2.fq.gz,fastq fastq,6578607600.0,21928692.0,S1 1 1.fq.gz,0:150 1:150,A:1766013280;C:1526325065;G:1530055427;T:1756153985;N:59843,150,150,,,1766013280,1526325065,1530055427,1756153985,59843,SRX18142161,SRS15643630,SRA1532106,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.9403,0.94099,0.08209,0.08119,0.73318,0.73381,0.52125,0.52565,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2022-11-02,Adult,Adult,Gut,Digestive System 74591,SRR23867223,SRX19679372,SRS17048767,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA1 6 1,,Treatment:Treatment 3|replicate:biological replicate 6|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D318 1,D318 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D318_1.fq.gz D318_2.fq.gz,fastq fastq,6866366100.0,22887887.0,D318 1.fq.gz,0:150 1:150,A:1868273258;C:1552581651;G:1569852801;T:1875314099;N:344291,150,150,,,1868273258,1552581651,1569852801,1875314099,344291,SRX19679372,SRS17048767,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.8375,0.83915,0.07702,0.07767,0.76262,0.76171,0.54066,0.53237,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74592,SRR23867224,SRX19679371,SRS17048768,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,CT 4 1,,Treatment:Treatment 1|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D14 1,D14 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D14_1.fq.gz D14_2.fq.gz,fastq fastq,6829713900.0,22765713.0,D14 1.fq.gz,0:150 1:150,A:1859107697;C:1557243925;G:1562047050;T:1850959070;N:356158,150,150,,,1859107697,1557243925,1562047050,1850959070,356158,SRX19679371,SRS17048768,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93803,0.93879,0.07869,0.07811,0.74886,0.74943,0.52061,0.52823,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74593,SRR23867225,SRX19679370,SRS17048766,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,CT 5 1,,Treatment:Treatment 1|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D15 1,D15 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D15_1.fq.gz D15_2.fq.gz,fastq fastq,7344699300.0,24482331.0,D15 1.fq.gz,0:150 1:150,A:1984210963;C:1688711675;G:1691818297;T:1979605971;N:352394,150,150,,,1984210963,1688711675,1691818297,1979605971,352394,SRX19679370,SRS17048766,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.9491,0.94978,0.06816,0.06844,0.76327,0.7629,0.54142,0.54595,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74594,SRR23867226,SRX19679369,SRS17048765,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA2 5 1,,Treatment:Treatment 4|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D424 1,D424 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D424_1.fq.gz D424_2.fq.gz,fastq fastq,6498250200.0,21660834.0,D424 1.fq.gz,0:150 1:150,A:1772150272;C:1477815024;G:1484628595;T:1763345990;N:310319,150,150,,,1772150272,1477815024,1484628595,1763345990,310319,SRX19679369,SRS17048765,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94543,0.94641,0.07905,0.07823,0.74986,0.75035,0.53517,0.53233,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74595,SRR23867227,SRX19679368,SRS17048764,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA2 4 1,,Treatment:Treatment 4|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D423 1,D423 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D423_1.fq.gz D423_2.fq.gz,fastq fastq,6273958500.0,20913195.0,D423 1.fq.gz,0:150 1:150,A:1673260340;C:1466412445;G:1466963414;T:1667050735;N:271566,150,150,,,1673260340,1466412445,1466963414,1667050735,271566,SRX19679368,SRS17048764,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.942,0.94352,0.05993,0.0599,0.77228,0.77195,0.52844,0.53232,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74596,SRR23867228,SRX19679367,SRS17048763,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,CT 3 1,,Treatment:Treatment 1|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D13 1,D13 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D13_1.fq.gz D13_2.fq.gz,fastq fastq,5886724800.0,19622416.0,D13 1.fq.gz,0:150 1:150,A:1591250606;C:1352364793;G:1355607710;T:1587209533;N:292158,150,150,,,1591250606,1352364793,1355607710,1587209533,292158,SRX19679367,SRS17048763,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94661,0.94747,0.07525,0.07496,0.7516,0.75187,0.55084,0.55292,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74597,SRR23867229,SRX19679366,SRS17048761,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA2 3 1,,Treatment:Treatment 4|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D422 1,D422 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D422_1.fq.gz D422_2.fq.gz,fastq fastq,6672249000.0,22240830.0,D422 1.fq.gz,0:150 1:150,A:1803863740;C:1534165789;G:1537751502;T:1796173017;N:294952,150,150,,,1803863740,1534165789,1537751502,1796173017,294952,SRX19679366,SRS17048761,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94265,0.94393,0.0721,0.072,0.74787,0.74748,0.51912,0.52899,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74598,SRR23867230,SRX19679365,SRS17048762,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA2 2 1,,Treatment:Treatment 4|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D421 1,D421 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D421_1.fq.gz D421_2.fq.gz,fastq fastq,6643530600.0,22145102.0,D421 1.fq.gz,0:150 1:150,A:1795067619;C:1527765455;G:1532536649;T:1787835091;N:325786,150,150,,,1795067619,1527765455,1532536649,1787835091,325786,SRX19679365,SRS17048762,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.9474,0.94797,0.07071,0.07071,0.7615,0.76112,0.55795,0.56408,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74599,SRR23867231,SRX19679364,SRS17048759,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA2 1 1,,Treatment:Treatment 4|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D420 1,D420 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D420_1.fq.gz D420_2.fq.gz,fastq fastq,7534605600.0,25115352.0,D420 1.fq.gz,0:150 1:150,A:2055326891;C:1715007378;G:1721655123;T:2042231399;N:384809,150,150,,,2055326891,1715007378,1721655123,2042231399,384809,SRX19679364,SRS17048759,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94402,0.94525,0.07551,0.07546,0.77019,0.76891,0.55363,0.54404,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74600,SRR23867232,SRX19679363,SRS17048760,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HC 1 1,,Treatment:Treatment 2|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D210 1,D210 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D210_1.fq.gz D210_2.fq.gz,fastq fastq,6009183600.0,20030612.0,D210 1.fq.gz,0:150 1:150,A:1591733590;C:1412595860;G:1417943794;T:1586611809;N:298547,150,150,,,1591733590,1412595860,1417943794,1586611809,298547,SRX19679363,SRS17048760,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94637,0.94743,0.06815,0.06784,0.73714,0.73643,0.55226,0.55092,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74601,SRR23867233,SRX19679362,SRS17048758,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HC 2 1,,Treatment:Treatment 2|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D211 1,D211 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D211_1.fq.gz D211_2.fq.gz,fastq fastq,6332032200.0,21106774.0,D211 1.fq.gz,0:150 1:150,A:1743782138;C:1425201935;G:1430924725;T:1731800503;N:322899,150,150,,,1743782138,1425201935,1430924725,1731800503,322899,SRX19679362,SRS17048758,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93226,0.93204,0.08016,0.08032,0.74324,0.74286,0.54021,0.5371,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74602,SRR23867234,SRX19679361,SRS17048756,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HC 3 1,,Treatment:Treatment 2|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D212 1,D212 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D212_1.fq.gz D212_2.fq.gz,fastq fastq,6348259200.0,21160864.0,D212 1.fq.gz,0:150 1:150,A:1725202920;C:1454384150;G:1454829638;T:1713517835;N:324657,150,150,,,1725202920,1454384150,1454829638,1713517835,324657,SRX19679361,SRS17048756,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.90683,0.91203,0.07122,0.07122,0.74681,0.74661,0.5452,0.5347,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74603,SRR23867235,SRX19679360,SRS17048757,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HC 4 1,,Treatment:Treatment 2|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D27 1,D27 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D27_1.fq.gz D27_2.fq.gz,fastq fastq,6398334000.0,21327780.0,D27 1.fq.gz,0:150 1:150,A:1735781862;C:1463993399;G:1469767825;T:1728586936;N:203978,150,150,,,1735781862,1463993399,1469767825,1728586936,203978,SRX19679360,SRS17048757,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94341,0.94389,0.07503,0.07443,0.7502,0.75053,0.50206,0.51826,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74604,SRR23867236,SRX19679359,SRS17048755,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,CT 2 1,,Treatment:Treatment 1|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D12 1,D12 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D12_1.fq.gz D12_2.fq.gz,fastq fastq,6792043800.0,22640146.0,D12 1.fq.gz,0:150 1:150,A:1842267056;C:1557221159;G:1562987498;T:1829222983;N:345104,150,150,,,1842267056,1557221159,1562987498,1829222983,345104,SRX19679359,SRS17048755,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94703,0.94883,0.08027,0.08068,0.75205,0.75118,0.53661,0.53408,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74605,SRR23867237,SRX19679358,SRS17048754,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HC 5 1,,Treatment:Treatment 2|replicate:biological replicate 5|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D28 1,D28 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D28_1.fq.gz D28_2.fq.gz,fastq fastq,6034195200.0,20113984.0,D28 1.fq.gz,0:150 1:150,A:1633707544;C:1381503281;G:1385828940;T:1632867136;N:288299,150,150,,,1633707544,1381503281,1385828940,1632867136,288299,SRX19679358,SRS17048754,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94075,0.94189,0.08432,0.08386,0.74568,0.7461,0.54138,0.5316,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74606,SRR23867238,SRX19679357,SRS17048752,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA1 1 1,,Treatment:Treatment 3|replicate:biological replicate 1|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D313 1,D313 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D313_1.fq.gz D313_2.fq.gz,fastq fastq,6287166300.0,20957221.0,D313 1.fq.gz,0:150 1:150,A:1746859891;C:1401226868;G:1406295612;T:1732466299;N:317630,150,150,,,1746859891,1401226868,1406295612,1732466299,317630,SRX19679357,SRS17048752,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.93403,0.93589,0.08952,0.0893,0.76952,0.76814,0.55082,0.54827,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74607,SRR23867239,SRX19679356,SRS17048753,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA1 2 1,,Treatment:Treatment 3|replicate:biological replicate 2|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D314 1,D314 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D314_1.fq.gz D314_2.fq.gz,fastq fastq,7196072400.0,23986908.0,D314 1.fq.gz,0:150 1:150,A:1797803744;C:1781437171;G:1817616095;T:1798859881;N:355509,150,150,,,1797803744,1781437171,1817616095,1798859881,355509,SRX19679356,SRS17048753,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.95856,0.95896,0.04023,0.03976,0.74894,0.74988,0.52261,0.521,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74608,SRR23867240,SRX19679355,SRS17048751,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA1 4 1,,Treatment:Treatment 3|replicate:biological replicate 4|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D316 1,D316 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D316_1.fq.gz D316_2.fq.gz,fastq fastq,7957519800.0,26525066.0,D316 1.fq.gz,0:150 1:150,A:2164476065;C:1823746216;G:1822643914;T:2146284109;N:369496,150,150,,,2164476065,1823746216,1822643914,2146284109,369496,SRX19679355,SRS17048751,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.94034,0.94097,0.0789,0.07865,0.74085,0.74008,0.53971,0.52566,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System 74609,SRR23867241,SRX19679354,SRS17048750,SRP427360,PRJNA944406,Protective mechanisms of a microbial oil against hypercholesterolemia: evidence from a zebrafish model,PRJNA944406,Other,We investigated the alterations in the intestinal transcriptome of zebrafish offered DHA and EPA rich microbial oil in the diet.,,,,,HCA1 3 1,,Treatment:Treatment 3|replicate:biological replicate 3|read:forward read|strain:Wild type|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:laboratory|age:1 year|dev stage:Adult|sex:male|tissue:Intestine|collected by:Adnan Gora|collection date:2021 09|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of zebrafish,D315 1,D315 1,PCR enrichment of adaptor ligated DNA,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP427360,,,D315_1.fq.gz D315_2.fq.gz,fastq fastq,6876353100.0,22921177.0,D315 1.fq.gz,0:150 1:150,A:1833034469;C:1606227842;G:1613928073;T:1822843597;N:319119,150,150,,,1833034469,1606227842,1613928073,1822843597,319119,SRX19679354,SRS17048750,SRA1604081,Nord University|Faculty of Bioscience and Aquaculture,Nord University,2,0.97864,0.97875,0.02219,0.02206,0.86908,0.86904,0.18385,0.17759,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,Norway,2023-03-17,Adult,Adult,Gut,Digestive System