rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
30250,SRR27756860,SRX23421865,SRS20276790,SRP486416,PRJNA1069604,Danio rerio strain:TL | breed:Danio rerio Raw sequence reads,PRJNA1069604,Other,To study the effect of a gene deletion in zebrafish,,,,Model organism or animal sample from danio rerio,cobll1a,,ecotype:missing|dev stage:missing|collection date:2023 02 21|geo loc name:missing|sex:neuter|tissue:FISH|biomaterial provider:missing|z:1000|BioSampleModel:Model organism or animal,,,,,,,,,Sample A,1,1,common method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP486416,,,cobll1a1.R2.fq.gz cobll1a1.R1.fq.gz,fastq fastq,7119566009.0,24893517.0,cobll1a1.R1.fq.gz,0:143.02 1:142.98,A:1899718926;C:1652762152;G:1669973661;T:1897092278;N:18992,143,142,,,1899718926,1652762152,1669973661,1897092278,18992,SRX23421865,SRS20276790,SRA1792726,Hunan Normal University|Hunan Normal University,Hunan Normal University Hunan Normal University Hunan Normal University,2,0.95825,0.95956,0.0788,0.07795,0.67894,0.67884,0.48342,0.48268,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-01-29,Undetermined,Undetermined,Undetermined,Undetermined
30251,SRR27756861,SRX23421864,SRS20276789,SRP486416,PRJNA1069604,Danio rerio strain:TL | breed:Danio rerio Raw sequence reads,PRJNA1069604,Other,To study the effect of a gene deletion in zebrafish,,,,MIMARKS Specimen sample from Danio rerio,WT,,strain:WT|collection date:2023 02 28|depth:missing|elev:missing|env broad scale:missing|env local scale:missing|env medium:missing|geo loc name:missing|isol growth condt:missing|lat lon:missing|BioSampleModel:MIMARKS.specimen|BioSampleModel:MIGS/MIMS/MIMARKS.microbial,,,,,,,,,Sample L,11,11,common method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP486416,,,tu3.R1.fq.gz tu3.R2.fq.gz,fastq fastq,6881670461.0,24208326.0,tu3.R1.fq.gz,0:142.15 1:142.12,A:1820714788;C:1612866668;G:1629078247;T:1818992861;N:17897,142,142,,,1820714788,1612866668,1629078247,1818992861,17897,SRX23421864,SRS20276789,SRA1792726,Hunan Normal University|Hunan Normal University,Hunan Normal University Hunan Normal University Hunan Normal University,2,0.95713,0.95821,0.07191,0.07071,0.67801,0.67726,0.48591,0.48501,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-01-29,Undetermined,Undetermined,Undetermined,Undetermined
30252,SRR27756862,SRX23421863,SRS20276790,SRP486416,PRJNA1069604,Danio rerio strain:TL | breed:Danio rerio Raw sequence reads,PRJNA1069604,Other,To study the effect of a gene deletion in zebrafish,,,,Model organism or animal sample from danio rerio,cobll1a,,ecotype:missing|dev stage:missing|collection date:2023 02 21|geo loc name:missing|sex:neuter|tissue:FISH|biomaterial provider:missing|z:1000|BioSampleModel:Model organism or animal,,,,,,,,,Sample C,3,3,common method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP486416,,,cobll1a2.R1.fq.gz cobll1a2.R2.fq.gz,fastq fastq,6639076778.0,23213579.0,cobll1a2.R1.fq.gz,0:143.02 1:142.98,A:1799749408;C:1513051586;G:1530064901;T:1796193421;N:17462,143,142,,,1799749408,1513051586,1530064901,1796193421,17462,SRX23421863,SRS20276790,SRA1792726,Hunan Normal University|Hunan Normal University,Hunan Normal University Hunan Normal University Hunan Normal University,2,0.95695,0.95781,0.091,0.0896,0.68199,0.68075,0.49051,0.49057,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-01-29,Undetermined,Undetermined,Undetermined,Undetermined
30253,SRR27756863,SRX23421862,SRS20276790,SRP486416,PRJNA1069604,Danio rerio strain:TL | breed:Danio rerio Raw sequence reads,PRJNA1069604,Other,To study the effect of a gene deletion in zebrafish,,,,Model organism or animal sample from danio rerio,cobll1a,,ecotype:missing|dev stage:missing|collection date:2023 02 21|geo loc name:missing|sex:neuter|tissue:FISH|biomaterial provider:missing|z:1000|BioSampleModel:Model organism or animal,,,,,,,,,Sample E,5,5,common method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP486416,,,cobll1a3.R2.fq.gz cobll1a3.R1.fq.gz,fastq fastq,6697695084.0,23490214.0,cobll1a3.R1.fq.gz,0:142.58 1:142.55,A:1755043056;C:1586242926;G:1602146148;T:1754245480;N:17474,142,142,,,1755043056,1586242926,1602146148,1754245480,17474,SRX23421862,SRS20276790,SRA1792726,Hunan Normal University|Hunan Normal University,Hunan Normal University Hunan Normal University Hunan Normal University,2,0.96007,0.96224,0.06487,0.06404,0.66939,0.66906,0.48829,0.48765,130,130,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-01-29,Undetermined,Undetermined,Undetermined,Undetermined
30254,SRR27756864,SRX23421861,SRS20276789,SRP486416,PRJNA1069604,Danio rerio strain:TL | breed:Danio rerio Raw sequence reads,PRJNA1069604,Other,To study the effect of a gene deletion in zebrafish,,,,MIMARKS Specimen sample from Danio rerio,WT,,strain:WT|collection date:2023 02 28|depth:missing|elev:missing|env broad scale:missing|env local scale:missing|env medium:missing|geo loc name:missing|isol growth condt:missing|lat lon:missing|BioSampleModel:MIMARKS.specimen|BioSampleModel:MIGS/MIMS/MIMARKS.microbial,,,,,,,,,Sample G,7,7,common method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP486416,,,tu1.R1.fq.gz tu1.R2.fq.gz,fastq fastq,7124072376.0,25020568.0,tu1.R1.fq.gz,0:142.38 1:142.35,A:1889928651;C:1664950324;G:1681768417;T:1887406325;N:18659,142,142,,,1889928651,1664950324,1681768417,1887406325,18659,SRX23421861,SRS20276789,SRA1792726,Hunan Normal University|Hunan Normal University,Hunan Normal University Hunan Normal University Hunan Normal University,2,0.96032,0.96145,0.07398,0.07359,0.68503,0.6843,0.48524,0.48933,116,116,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-01-29,Undetermined,Undetermined,Undetermined,Undetermined
30255,SRR27756865,SRX23421860,SRS20276789,SRP486416,PRJNA1069604,Danio rerio strain:TL | breed:Danio rerio Raw sequence reads,PRJNA1069604,Other,To study the effect of a gene deletion in zebrafish,,,,MIMARKS Specimen sample from Danio rerio,WT,,strain:WT|collection date:2023 02 28|depth:missing|elev:missing|env broad scale:missing|env local scale:missing|env medium:missing|geo loc name:missing|isol growth condt:missing|lat lon:missing|BioSampleModel:MIMARKS.specimen|BioSampleModel:MIGS/MIMS/MIMARKS.microbial,,,,,,,,,Sample J,9,9,common method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP486416,,,tu2.R1.fq.gz tu2.R2.fq.gz,fastq fastq,7024719799.0,24627933.0,tu2.R1.fq.gz,0:142.63 1:142.60,A:1841519314;C:1662861553;G:1679614735;T:1840705226;N:18971,142,142,,,1841519314,1662861553,1679614735,1840705226,18971,SRX23421860,SRS20276789,SRA1792726,Hunan Normal University|Hunan Normal University,Hunan Normal University Hunan Normal University Hunan Normal University,2,0.96006,0.96141,0.06713,0.06631,0.67464,0.67426,0.48684,0.48648,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-01-29,Undetermined,Undetermined,Undetermined,Undetermined
34593,SRR32128857,SRX27475161,SRS23899211,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,lighttreated4,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable10|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable10|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish10|isolation source:zebrafish10|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 10,library 10,DNA barcode10,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,lighttreated4.read1.fastq.gz lighttreated4.read2.fastq.gz,fastq fastq,6388100400.0,21293668.0,lighttreated4.read1.fastq.gz,0:150 1:150,A:1711345062;C:1474552325;G:1531680528;T:1670485285;N:37200,150,150,,,1711345062,1474552325,1531680528,1670485285,37200,SRX27475161,SRS23899211,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34594,SRR32128858,SRX27475160,SRS23899210,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,lighttreated3,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable9|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable9|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish9|isolation source:zebrafish9|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 9,library 9,DNA barcode9,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,lighttreated3.read1.fastq.gz lighttreated3.read2.fastq.gz,fastq fastq,7919383200.0,26397944.0,lighttreated3.read1.fastq.gz,0:150 1:150,A:2135212601;C:1813586654;G:1892878979;T:2077658764;N:46202,150,150,,,2135212601,1813586654,1892878979,2077658764,46202,SRX27475160,SRS23899210,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34595,SRR32128859,SRX27475159,SRS23899209,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,lighttreated2,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable8|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable8|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish8|isolation source:zebrafish8|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 8,library 8,DNA barcode8,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,lighttreated2.read1.fastq.gz lighttreated2.read2.fastq.gz,fastq fastq,7060994100.0,23536647.0,lighttreated2.read1.fastq.gz,0:150 1:150,A:1921099545;C:1595276449;G:1668657714;T:1875918159;N:42233,150,150,,,1921099545,1595276449,1668657714,1875918159,42233,SRX27475159,SRS23899209,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34596,SRR32128860,SRX27475158,SRS23899208,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,lighttreated1,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable7|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable7|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish7|isolation source:zebrafish7|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 7,library 7,DNA barcode7,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,lighttreated1.read1.fastq.gz lighttreated1.read2.fastq.gz,fastq fastq,6908625300.0,23028751.0,lighttreated1.read1.fastq.gz,0:150 1:150,A:1872190225;C:1565342714;G:1644929113;T:1826124355;N:38893,150,150,,,1872190225,1565342714,1644929113,1826124355,38893,SRX27475158,SRS23899208,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34597,SRR32128861,SRX27475157,SRS23899207,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,darktreated6,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable6|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable6|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish6|isolation source:zebrafish6|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 6,library 6,DNA barcode6,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,darktreated6.read1.fastq.gz darktreated6.read2.fastq.gz,fastq fastq,8601630900.0,28672103.0,darktreated6.read1.fastq.gz,0:150 1:150,A:2318530970;C:1973292572;G:2040962638;T:2268796005;N:48715,150,150,,,2318530970,1973292572,2040962638,2268796005,48715,SRX27475157,SRS23899207,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34598,SRR32128862,SRX27475156,SRS23899206,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,darktreated5,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable5|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable5|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish5|isolation source:zebrafish5|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 5,library 5,DNA barcode5,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,darktreated5.read1.fastq.gz darktreated5.read2.fastq.gz,fastq fastq,8265255300.0,27550851.0,darktreated5.read1.fastq.gz,0:150 1:150,A:2224219375;C:1898065838;G:1969603341;T:2173318912;N:47834,150,150,,,2224219375,1898065838,1969603341,2173318912,47834,SRX27475156,SRS23899206,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34599,SRR32128863,SRX27475155,SRS23899205,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,darktreated4,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable4|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable4|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish4|isolation source:zebrafish4|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 4,library 4,DNA barcode4,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,darktreated4.read1.fastq.gz darktreated4.read2.fastq.gz,fastq fastq,8061663600.0,26872212.0,darktreated4.read1.fastq.gz,0:150 1:150,A:2171664867;C:1853256385;G:1909447014;T:2127248788;N:46546,150,150,,,2171664867,1853256385,1909447014,2127248788,46546,SRX27475155,SRS23899205,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34600,SRR32128864,SRX27475154,SRS23899204,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,darktreated3,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable3|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable3|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish3|isolation source:zebrafish3|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 3,library 3,DNA barcode3,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,darktreated3.read1.fastq.gz darktreated3.read2.fastq.gz,fastq fastq,8287650300.0,27625501.0,darktreated3.read1.fastq.gz,0:150 1:150,A:2231337901;C:1902488349;G:1971440974;T:2182335741;N:47335,150,150,,,2231337901,1902488349,1971440974,2182335741,47335,SRX27475154,SRS23899204,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34601,SRR32128865,SRX27475153,SRS23899203,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,lighttreated6,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable12|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable12|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish12|isolation source:zebrafish12|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 12,library 12,DNA barcode12,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,lighttreated6.read1.fastq.gz lighttreated6.read2.fastq.gz,fastq fastq,7610579400.0,25368598.0,lighttreated6.read1.fastq.gz,0:150 1:150,A:2063115765;C:1733106391;G:1795336188;T:2018975316;N:45740,150,150,,,2063115765,1733106391,1795336188,2018975316,45740,SRX27475153,SRS23899203,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34602,SRR32128866,SRX27475152,SRS23899202,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,lighttreated5,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable11|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable11|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish11|isolation source:zebrafish11|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 11,library 11,DNA barcode11,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,lighttreated5.read1.fastq.gz lighttreated5.read2.fastq.gz,fastq fastq,6677234100.0,22257447.0,lighttreated5.read1.fastq.gz,0:150 1:150,A:1812295746;C:1506030273;G:1585674870;T:1773195250;N:37961,150,150,,,1812295746,1506030273,1585674870,1773195250,37961,SRX27475152,SRS23899202,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34603,SRR32128867,SRX27475151,SRS23899201,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,darktreated2,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable2|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable2|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish2|isolation source:zebrafish2|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 2,library 2,DNA barcode2,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,darktreated2.read1.fastq.gz darktreated2.read2.fastq.gz,fastq fastq,8723972700.0,29079909.0,darktreated2.read1.fastq.gz,0:150 1:150,A:2341340036;C:2009282478;G:2082163796;T:2291135873;N:50517,150,150,,,2341340036,2009282478,2082163796,2291135873,50517,SRX27475151,SRS23899201,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
34604,SRR32128868,SRX27475150,SRS23899200,SRP559934,PRJNA1215774,3 mpf dark reared zebrafish eye RNA sequencing,PRJNA1215774,Other,Outdoor time and light intensity are important emerging factors affecting myopia; however  the underlying mechanisms remain unknown. To clarify the possible molecular mechanisms underlying myopia caused by dark environment  3 mpf zebrafish eye RNA sequencing was performed.,,,,,darktreated1,,strain:not applicable|isolate:Sun Yat sen University|breed:not applicable1|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable1|collection date:2021 04 16|geo loc name:China: GuangZhou|sex:not applicable|tissue:zebrafish1|isolation source:zebrafish1|BioSampleModel:Model organism or animal,,,,,,,,,sample info,library 1,library 1,DNA barcode1,,,WXS,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP559934,,,darktreated1.read1.fastq.gz darktreated1.read2.fastq.gz,fastq fastq,7940928300.0,26469761.0,darktreated1.read1.fastq.gz,0:150 1:150,A:2133717650;C:1824526059;G:1895330033;T:2087310578;N:43980,150,150,,,2133717650,1824526059,1895330033,2087310578,43980,SRX27475150,SRS23899200,SRA2060897,zhujiang hospital|ophthalmology,zhujiang hospital,,,,,,,,,,,,B,B,biological fallback assumption,illumina,novaseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2025-01-25,Undetermined,Adult,Undetermined,Undetermined
68548,SRR18056674,SRX14208687,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT6,6,6,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT6.R1.fq.gz SS3WT6.R2.fq.gz,fastq fastq,7174164397.0,25400980.0,SS3WT6.R1.fq.gz,0:141.31 1:141.13,A:1934605412;C:1644763885;G:1664938935;T:1929811138;N:45027,141,141,,,1934605412,1644763885,1664938935,1929811138,45027,SRX14208687,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94928,0.94948,0.09187,0.09099,0.68765,0.68769,0.50435,0.50363,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68549,SRR18056675,SRX14208686,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT5,5,5,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT5.R1.fq.gz SS3WT5.R2.fq.gz,fastq fastq,7159028081.0,25133913.0,SS3WT5.R1.fq.gz,0:142.50 1:142.33,A:1905921436;C:1664337487;G:1683294939;T:1905427825;N:46394,142,142,,,1905921436,1664337487,1683294939,1905427825,46394,SRX14208686,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94917,0.95027,0.09384,0.09347,0.6594,0.65894,0.49218,0.49202,122,122,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68550,SRR18056676,SRX14208685,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT4,4,4,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT4.R1.fq.gz SS3WT4.R2.fq.gz,fastq fastq,6985092696.0,24360978.0,SS3WT4.R1.fq.gz,0:143.44 1:143.29,A:1858629258;C:1624045323;G:1642960060;T:1859412787;N:45268,143,143,,,1858629258,1624045323,1642960060,1859412787,45268,SRX14208685,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94221,0.94208,0.1047,0.1038,0.66231,0.66251,0.49213,0.49128,113,112,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68551,SRR18056677,SRX14208684,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT3,3,3,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT3.R1.fq.gz SS3WT3.R2.fq.gz,fastq fastq,6604271936.0,23189546.0,SS3WT3.R1.fq.gz,0:142.47 1:142.32,A:1765899330;C:1527534084;G:1543609939;T:1767186572;N:42011,142,142,,,1765899330,1527534084,1543609939,1767186572,42011,SRX14208684,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94017,0.94088,0.10254,0.10225,0.65163,0.65167,0.47798,0.47707,131,131,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68552,SRR18056678,SRX14208683,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT2,2,2,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT2.R1.fq.gz SS3WT2.R2.fq.gz,fastq fastq,6674317073.0,23265242.0,SS3WT2.R1.fq.gz,0:143.52 1:143.36,A:1768071045;C:1560492667;G:1576548690;T:1769161220;N:43451,143,143,,,1768071045,1560492667,1576548690,1769161220,43451,SRX14208683,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94677,0.9473,0.08956,0.08902,0.66559,0.66557,0.48058,0.48136,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68553,SRR18056679,SRX14208682,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT1,1,1,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT1.R1.fq.gz SS3WT1.R2.fq.gz,fastq fastq,6848211264.0,23787995.0,SS3WT1.R1.fq.gz,0:144.06 1:143.82,A:1825907736;C:1587014566;G:1607121352;T:1828122105;N:45505,144,143,,,1825907736,1587014566,1607121352,1828122105,45505,SRX14208682,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94226,0.94255,0.09053,0.08971,0.65807,0.65823,0.48525,0.48427,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined