rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 33722,SRR30640695,SRX26062515,SRS22631699,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,WT24hpfcontrol1,,breed:natural spawning of AB adults|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:WT24hpfcontrol1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Wild type zebrafish : 12 embryos in total 2 3mg,WT24hpfcontrol1 R,WT24hpfcontrol1 R,Wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,WT24hpfcontrol1_R1.clean.fq.gz WT24hpfcontrol1_R2.clean.fq.gz,fastq fastq,6761688309.0,27496581.0,WT24hpfcontrol1 R1.clean.fq.gz,0:122.99 1:122.92,A:1946719560;C:1442103403;G:1451347536;T:1921456727;N:61083,122,122,,,1946719560,1442103403,1451347536,1921456727,61083,SRX26062515,SRS22631699,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33723,SRR30640696,SRX26062514,SRS22631698,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1MOMutant3,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1MOMutant3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of MO morphants zebrafish : 12 embryos in total 2 5mg,PCM1MOMutant3 R,PCM1MOMutant3 R,MO morphants zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1MOMutant3_R1.clean.fq.gz PCM1MOMutant3_R2.clean.fq.gz,fastq fastq,6356420208.0,23407180.0,PCM1MOMutant3 R1.clean.fq.gz,0:135.78 1:135.78,A:1742323782;C:1448163439;G:1451783264;T:1714090084;N:59639,135,135,,,1742323782,1448163439,1451783264,1714090084,59639,SRX26062514,SRS22631698,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33724,SRR30640697,SRX26062513,SRS22631697,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1MOMutant2,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1MOMutant2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of MO morphants zebrafish : 12 embryos in total 2 4mg,PCM1MOMutant2 R,PCM1MOMutant2 R,MO morphants zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1MOMutant2_R1.clean.fq.gz PCM1MOMutant2_R2.clean.fq.gz,fastq fastq,6146772469.0,22703012.0,PCM1MOMutant2 R1.clean.fq.gz,0:135.37 1:135.37,A:1647298308;C:1435201745;G:1438871965;T:1625343182;N:57269,135,135,,,1647298308,1435201745,1438871965,1625343182,57269,SRX26062513,SRS22631697,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33725,SRR30640698,SRX26062512,SRS22631696,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1MOMutant1,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1MOMutant1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of MO morphants zebrafish : 12 embryos in total 2 3mg,PCM1MOMutant1 R,PCM1MOMutant1 R,MO morphants zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1MOMutant1_R1.clean.fq.gz PCM1MOMutant1_R2.clean.fq.gz,fastq fastq,5701775379.0,21587297.0,PCM1MOMutant1 R1.clean.fq.gz,0:132.06 1:132.06,A:1578153876;C:1282130829;G:1284978375;T:1556460380;N:51919,132,132,,,1578153876,1282130829,1284978375,1556460380,51919,SRX26062512,SRS22631696,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33726,SRR30640699,SRX26062511,SRS22631695,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOmutant3,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOmutant3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO mutant zebrafish : 12 embryos in total 2 5mg,PCM1KOmutant3 R,PCM1KOmutant3 R,pcm1 KO mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOmutant3_R1.clean.fq.gz PCM1KOmutant3_R2.clean.fq.gz,fastq fastq,4673179612.0,17529406.0,PCM1KOmutant3 R1.clean.fq.gz,0:133.29 1:133.30,A:1266929858;C:1078407007;G:1080490713;T:1247307342;N:44692,133,133,,,1266929858,1078407007,1080490713,1247307342,44692,SRX26062511,SRS22631695,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33727,SRR30640700,SRX26062510,SRS22631694,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOmutant2,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOmutant2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO mutant zebrafish : 12 embryos in total 2 4mg,PCM1KOmutant2 R,PCM1KOmutant2 R,pcm1 KO mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOmutant2_R1.clean.fq.gz PCM1KOmutant2_R2.clean.fq.gz,fastq fastq,6073820902.0,23767661.0,PCM1KOmutant2 R1.clean.fq.gz,0:127.78 1:127.77,A:1691243395;C:1356197711;G:1357868249;T:1668456939;N:54608,127,127,,,1691243395,1356197711,1357868249,1668456939,54608,SRX26062510,SRS22631694,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33728,SRR30640701,SRX26062509,SRS22631693,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOmutant1,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOmutant1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO mutant zebrafish : 12 embryos in total 2 3mg,PCM1KOmutant1 R,PCM1KOmutant1 R,KO mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOmutant1_R1.clean.fq.gz PCM1KOmutant1_R2.clean.fq.gz,fastq fastq,6040589500.0,23826027.0,PCM1KOmutant1 R1.clean.fq.gz,0:126.76 1:126.76,A:1733588631;C:1297359473;G:1301151829;T:1708434373;N:55194,126,126,,,1733588631,1297359473,1301151829,1708434373,55194,SRX26062509,SRS22631693,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33729,SRR30640702,SRX26062508,SRS22631692,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOcompensate3,,breed:Tg [HuC:GFP|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOcompensate3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO compensate zebrafish : 12 embryos in total 2 5mg,PCM1KOcompensate3 R,PCM1KOcompensate3 R,pcm1 KO compensate zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOcompensate3_R1.clean.fq.gz PCM1KOcompensate3_R2.clean.fq.gz,fastq fastq,5632945620.0,21351897.0,PCM1KOcompensate3 R1.clean.fq.gz,0:131.92 1:131.90,A:1561604697;C:1264380828;G:1267746178;T:1539161674;N:52243,131,131,,,1561604697,1264380828,1267746178,1539161674,52243,SRX26062508,SRS22631692,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33730,SRR30640703,SRX26062507,SRS22631691,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,WT24hpfcontrol3,,breed:natural spawning of AB adults|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:WT24hpfcontrol3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Wild type zebrafish : 12 embryos in total 2 5mg,WT24hpfcontrol3 R,WT24hpfcontrol3 R,Wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,WT24hpfcontrol3_R1.clean.fq.gz WT24hpfcontrol3_R2.clean.fq.gz,fastq fastq,5047867453.0,19837417.0,WT24hpfcontrol3 R1.clean.fq.gz,0:127.23 1:127.23,A:1412463929;C:1119657233;G:1121642146;T:1394058438;N:45707,127,127,,,1412463929,1119657233,1121642146,1394058438,45707,SRX26062507,SRS22631691,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33731,SRR30640704,SRX26062506,SRS22631690,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,WT24hpfcontrol2,,breed:natural spawning of AB adults|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:WT24hpfcontrol2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Wild type zebrafish : 12 embryos in total 2 4mg,WT24hpfcontrol2 R,WT24hpfcontrol2 R,Wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,WT24hpfcontrol2_R1.clean.fq.gz WT24hpfcontrol2_R2.clean.fq.gz,fastq fastq,5408273952.0,21601107.0,WT24hpfcontrol2 R1.clean.fq.gz,0:125.19 1:125.18,A:1510365712;C:1201646307;G:1204419555;T:1491793767;N:48611,125,125,,,1510365712,1201646307,1204419555,1491793767,48611,SRX26062506,SRS22631690,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33732,SRR30640705,SRX26062505,SRS22631689,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOcompensate2,,breed:Tg [HuC:GFP|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOcompensate2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO compensate zebrafish : 12 embryos in total 2 4mg,PCM1KOcompensate2 R,PCM1KOcompensate2 R,pcm1 KO compensate zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOcompensate2_R1.clean.fq.gz PCM1KOcompensate2_R2.clean.fq.gz,fastq fastq,5996379188.0,22765993.0,PCM1KOcompensate2 R1.clean.fq.gz,0:131.70 1:131.70,A:1669800521;C:1339211911;G:1342418096;T:1644890999;N:57661,131,131,,,1669800521,1339211911,1342418096,1644890999,57661,SRX26062505,SRS22631689,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33733,SRR30640706,SRX26062504,SRS22631688,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOcompensate1,,breed:Tg [HuC:GFP|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOcompensate1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO compensate zebrafish : 12 embryos in total 2 3mg,PCM1KOcompensate1 R,PCM1KOcompensate1 R,pcm1 KO compensate zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOcompensate1_R1.clean.fq.gz PCM1KOcompensate1_R2.clean.fq.gz,fastq fastq,5594219881.0,21191291.0,PCM1KOcompensate1 R1.clean.fq.gz,0:131.99 1:131.99,A:1594003450;C:1214578517;G:1215705001;T:1569880851;N:52062,131,131,,,1594003450,1214578517,1215705001,1569880851,52062,SRX26062504,SRS22631688,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 44973,SRR6374789,SRX3469648,SRS2757040,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,WT 2.5hpf replicate3,,strain:AB9|age:2.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,WT 256T3,WT 256T3,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,WT_256T3_1.fq.gz WT_256T3_2.fq.gz,fastq fastq,6640655400.0,22135518.0,WT 256T3 2.fq.gz,0:150 1:150,A:1739475484;C:1580378730;G:1596152227;T:1724360040;N:288919,150,150,,,1739475484,1580378730,1596152227,1724360040,288919,SRX3469648,SRS2757040,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.90981,0.91081,0.02171,0.02186,0.75741,0.75806,0.49376,0.49223,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44974,SRR6374790,SRX3469647,SRS2757039,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,WT 3.5hpf replicate1,,strain:AB10|age:3.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,WT HIGHT1,WT HIGHT1,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,WT_HIGHT1_1.fq.gz WT_HIGHT1_2.fq.gz,fastq fastq,6664975200.0,22216584.0,WT HIGHT1 1.fq.gz,0:150 1:150,A:1719120604;C:1609236924;G:1628143616;T:1708202939;N:271117,150,150,,,1719120604,1609236924,1628143616,1708202939,271117,SRX3469647,SRS2757039,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.92339,0.9242,0.0266,0.0266,0.74728,0.74941,0.49813,0.49574,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44975,SRR6374791,SRX3469646,SRS2757037,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,WT 2.5hpf replicate1,,strain:AB7|age:2.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,WT 256T1,WT 256T1,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,WT_256T1_1.fq.gz WT_256T1_2.fq.gz,fastq fastq,6715609500.0,22385365.0,WT 256T1 2.fq.gz,0:150 1:150,A:1769395942;C:1591788099;G:1605398561;T:1748703695;N:323203,150,150,,,1769395942,1591788099,1605398561,1748703695,323203,SRX3469646,SRS2757037,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.90679,0.90847,0.02135,0.02116,0.76203,0.76268,0.49184,0.49246,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44976,SRR6374792,SRX3469645,SRS2757036,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,WT 2.5hpf replicate2,,strain:AB8|age:2.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,WT 256T2,WT 256T2,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,WT_256T2_1.fq.gz WT_256T2_2.fq.gz,fastq fastq,6762998400.0,22543328.0,WT 256T2 1.fq.gz,0:150 1:150,A:1782100181;C:1603526988;G:1617249866;T:1759813396;N:307969,150,150,,,1782100181,1603526988,1617249866,1759813396,307969,SRX3469645,SRS2757036,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.89801,0.8976,0.02183,0.02165,0.76081,0.76203,0.49389,0.49424,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44977,SRR6374793,SRX3469644,SRS2757038,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,SL2 3.5hpf replicate2,,strain:AB5|age:3.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,SL2 HIGHT2,SL2 HIGHT2,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,SL2_HIGHT2_1.fq.gz SL2_HIGHT2_2.fq.gz,fastq fastq,6676323300.0,22254411.0,SL2 HIGHT2 2.fq.gz,0:150 1:150,A:1767577251;C:1573479421;G:1588807215;T:1745946421;N:512992,150,150,,,1767577251,1573479421,1588807215,1745946421,512992,SRX3469644,SRS2757038,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.90205,0.90648,0.02777,0.0277,0.75584,0.75653,0.51823,0.51604,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44978,SRR6374794,SRX3469643,SRS2757035,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,SL2 3.5hpf replicate3,,strain:AB6|age:3.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,SL2 HIGHT3,SL2 HIGHT3,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,SL2_HIGHT3_1.fq.gz SL2_HIGHT3_2.fq.gz,fastq fastq,6612611700.0,22042039.0,SL2 HIGHT3 2.fq.gz,0:150 1:150,A:1756988350;C:1553611782;G:1567364966;T:1734147606;N:498996,150,150,,,1756988350,1553611782,1567364966,1734147606,498996,SRX3469643,SRS2757035,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.91343,0.91843,0.02757,0.0279,0.76867,0.7683,0.46658,0.4679,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44979,SRR6374795,SRX3469642,SRS2757030,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,SL2 2.5hpf replicate3,,strain:AB3|age:2.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,SL2 256T3,SL2 256T3,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,SL2_256T3_1.fq.gz SL2_256T3_2.fq.gz,fastq fastq,6729597900.0,22431993.0,SL2 256T3 2.fq.gz,0:150 1:150,A:1817987703;C:1553037356;G:1567792944;T:1790273155;N:506742,150,150,,,1817987703,1553037356,1567792944,1790273155,506742,SRX3469642,SRS2757030,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.91453,0.91763,0.02697,0.02736,0.75899,0.76059,0.51092,0.5108,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44980,SRR6374796,SRX3469641,SRS2757033,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,SL2 3.5hpf replicate1,,strain:AB4|age:3.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,SL2 HIGHT1,SL2 HIGHT1,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,SL2_HIGHT1_1.fq.gz SL2_HIGHT1_2.fq.gz,fastq fastq,6732386100.0,22441287.0,SL2 HIGHT1 2.fq.gz,0:150 1:150,A:1731846790;C:1635335671;G:1650396210;T:1714309561;N:497868,150,150,,,1731846790,1635335671,1650396210,1714309561,497868,SRX3469641,SRS2757033,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.90909,0.91272,0.02301,0.023,0.75952,0.76077,0.49945,0.5001,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44981,SRR6374797,SRX3469640,SRS2757031,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,SL2 2.5hpf replicate1,,strain:AB1|age:2.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,SL2 256T1,SL2 256T1,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,SL2_256T1_1.fq.gz SL2_256T1_2.fq.gz,fastq fastq,6743416800.0,22478056.0,SL2 256T1 2.fq.gz,0:150 1:150,A:1751516084;C:1621913942;G:1637195849;T:1732489990;N:300935,150,150,,,1751516084,1621913942,1637195849,1732489990,300935,SRX3469640,SRS2757031,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.91673,0.91538,0.01822,0.01834,0.76086,0.76224,0.51335,0.5122,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44982,SRR6374798,SRX3469639,SRS2757032,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,SL2 2.5hpf replicate2,,strain:AB2|age:2.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,SL2 256T2,SL2 256T2,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,SL2_256T2_1.fq.gz SL2_256T2_2.fq.gz,fastq fastq,6736499400.0,22454998.0,SL2 256T2 2.fq.gz,0:150 1:150,A:1768494405;C:1602695987;G:1616984435;T:1747813127;N:511446,150,150,,,1768494405,1602695987,1616984435,1747813127,511446,SRX3469639,SRS2757032,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.91581,0.91836,0.02067,0.02056,0.7599,0.7599,0.51129,0.51126,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44983,SRR6374799,SRX3469638,SRS2757034,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,WT 3.5hpf replicate2,,strain:AB11|age:3.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,WT HIGHT2,WT HIGHT2,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,WT_HIGHT2_1.fq.gz WT_HIGHT2_2.fq.gz,fastq fastq,6691178100.0,22303927.0,WT HIGHT2 1.fq.gz,0:150 1:150,A:1748847918;C:1599737657;G:1612813074;T:1729484535;N:294916,150,150,,,1748847918,1599737657,1612813074,1729484535,294916,SRX3469638,SRS2757034,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.91783,0.91916,0.02166,0.02123,0.75556,0.75592,0.49807,0.49621,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 44984,SRR6374800,SRX3469637,SRS2757029,SRP126712,PRJNA421571,Danio rerio Raw sequence reads,PRJNA421571,Whole Genome Sequencing,To compare the different expressed genes between knockout fish and wild type,,,,,WT 3.5hpf replicate3,,strain:AB12|age:3.5hpf|sex:not determined|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA Seq of danio rerio:embryo,WT HIGHT3,WT HIGHT3,embryos quickly frozen in liquid nitrogen,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 4000,,SRP126712,,,WT_HIGHT3_1.fq.gz WT_HIGHT3_2.fq.gz,fastq fastq,6751652400.0,22505508.0,WT HIGHT3 2.fq.gz,0:150 1:150,A:1772149753;C:1607061948;G:1619916124;T:1752229372;N:295203,150,150,,,1772149753,1607061948,1619916124,1752229372,295203,SRX3469637,SRS2757029,SRA638743,"Institute of Hydrobiology, Chinese Academy of Sciences|Fish Developmental Genetics and Cell Engineering","Institute of Hydrobiology, Chinese Academy of Sciences",2,0.90842,0.91132,0.02173,0.02189,0.76043,0.76171,0.49031,0.49021,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2021-01-01,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48726,SRR7789580,SRX4644423,SRS3742493,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 12hpf 3 S18,,strain:5D|isolate:108|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 12hpf 3 S18,TDCIPP 12hpf 3 S18,TDCIPP 12hpf 3 S18,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-12hpf-3_S18_L001_R2_001.fastq.gz TDCIPP-12hpf-3_S18_L001_R1_001.fastq.gz,fastq fastq,103340472.0,472844.0,TDCIPP 12hpf 3 S18 L001 R1 001.fastq.gz,0:109.23 1:109.32,A:26737838;C:24795090;G:24934613;T:26529096;N:343835,109,109,,,26737838,24795090,24934613,26529096,343835,SRX4644423,SRS3742493,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95154,0.95221,0.00019,0.00019,0.99922,0.99924,0.41074,0.41244,121,121,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48727,SRR7789581,SRX4644422,SRS3742492,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 12hpf 2 S17,,strain:5D|isolate:107|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 12hpf 2 S17,TDCIPP 12hpf 2 S17,TDCIPP 12hpf 2 S17,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-12hpf-2_S17_L001_R1_001.fastq.gz TDCIPP-12hpf-2_S17_L001_R2_001.fastq.gz,fastq fastq,127382315.0,575073.0,TDCIPP 12hpf 2 S17 L001 R1 001.fastq.gz,0:110.70 1:110.81,A:32604644;C:30882861;G:31076792;T:32385804;N:432214,110,110,,,32604644,30882861,31076792,32385804,432214,SRX4644422,SRS3742492,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.94383,0.94386,0.00021,0.00022,0.99926,0.99926,0.41023,0.38711,151,151,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48728,SRR7789582,SRX4644421,SRS3742490,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 12hpf 1 S16,,strain:5D|isolate:106|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 12hpf 1 S16,TDCIPP 12hpf 1 S16,TDCIPP 12hpf 1 S16,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-12hpf-1_S16_L001_R1_001.fastq.gz TDCIPP-12hpf-1_S16_L001_R2_001.fastq.gz,fastq fastq,106771425.0,482515.0,TDCIPP 12hpf 1 S16 L001 R1 001.fastq.gz,0:110.59 1:110.69,A:27853264;C:25384933;G:25518809;T:27629968;N:384451,110,110,,,27853264,25384933,25518809,27629968,384451,SRX4644421,SRS3742490,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95913,0.95873,0.00021,0.00025,0.99928,0.99928,0.4122,0.39928,79,79,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48729,SRR7789583,SRX4644420,SRS3742491,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 12hpf 3 S9x,,strain:5D|isolate:105|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 12hpf 3 S9x,DMSO 12hpf 3 S9x,DMSO 12hpf 3 S9x,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-12hpf-3_S9x_L001_R2_001.fastq.gz DMSO-12hpf-3_S9x_L001_R1_001.fastq.gz,fastq fastq,106526213.0,483892.0,DMSO 12hpf 3 S9x L001 R2 001.fastq.gz,0:110.00 1:110.14,A:27523846;C:25609135;G:25786277;T:27228622;N:378333,110,110,,,27523846,25609135,25786277,27228622,378333,SRX4644420,SRS3742491,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95736,0.95668,0.00013,0.00011,0.99924,0.99926,0.45348,0.45617,77,77,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48730,SRR7789584,SRX4644419,SRS3742489,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 12hpf 2 S8,,strain:5D|isolate:104|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 12hpf 2 S8,DMSO 12hpf 2 S8,DMSO 12hpf 2 S8,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-12hpf-2_S8_L001_R1_001.fastq.gz DMSO-12hpf-2_S8_L001_R2_001.fastq.gz,fastq fastq,126754105.0,599652.0,DMSO 12hpf 2 S8 L001 R1 001.fastq.gz,0:105.62 1:105.76,A:32875248;C:30352965;G:30543115;T:32575671;N:407106,105,105,,,32875248,30352965,30543115,32575671,407106,SRX4644419,SRS3742489,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.9631,0.96229,0.00019,0.00019,0.99928,0.99928,0.45939,0.44598,92,92,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48731,SRR7789585,SRX4644418,SRS3742488,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 12hpf 1 S7,,strain:5D|isolate:103|dev stage:12 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 12hpf 1 S7,DMSO 12hpf 1 S7,DMSO 12hpf 1 S7,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-12hpf-1_S7_L001_R2_001.fastq.gz DMSO-12hpf-1_S7_L001_R1_001.fastq.gz,fastq fastq,133973234.0,626692.0,DMSO 12hpf 1 S7 L001 R1 001.fastq.gz,0:106.86 1:106.92,A:34741794;C:32048895;G:32233963;T:34368689;N:579893,106,106,,,34741794,32048895,32233963,34368689,579893,SRX4644418,SRS3742488,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.961,0.9606,0.0002,0.00021,0.99928,0.99928,0.47357,0.45763,74,74,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Segmentation,Embryo,Embryo Imprecise,All anatomical structures 48732,SRR7789586,SRX4644417,SRS3742487,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 6hpf 5 S15,,strain:5D|isolate:102|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 6hpf 5 S15,TDCIPP 6hpf 5 S15,TDCIPP 6hpf 5 S15,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-6hpf-5_S15_L001_R1_001.fastq.gz TDCIPP-6hpf-5_S15_L001_R2_001.fastq.gz,fastq fastq,103436592.0,515633.0,TDCIPP 6hpf 5 S15 L001 R2 001.fastq.gz,0:100.23 1:100.37,A:26213221;C:25393681;G:25395332;T:25877353;N:557005,100,100,,,26213221,25393681,25395332,25877353,557005,SRX4644417,SRS3742487,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.9545,0.9544,0.00043,0.0004,0.99898,0.99904,0.33908,0.3596,64,151,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48733,SRR7789587,SRX4644416,SRS3742486,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 6hpf 3 S14,,strain:5D|isolate:101|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 6hpf 3 S14,TDCIPP 6hpf 3 S14,TDCIPP 6hpf 3 S14,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-6hpf-3_S14_L001_R1_001.fastq.gz TDCIPP-6hpf-3_S14_L001_R2_001.fastq.gz,fastq fastq,99767681.0,500238.0,TDCIPP 6hpf 3 S14 L001 R2 001.fastq.gz,0:99.64 1:99.80,A:25255312;C:24464400;G:24481390;T:25002218;N:564361,99,99,,,25255312,24464400,24481390,25002218,564361,SRX4644416,SRS3742486,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96117,0.96052,0.00028,0.00028,0.99924,0.99922,0.35418,0.35375,148,149,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48752,SRR7789606,SRX4644397,SRS3742467,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 6hpf 5 S6,,strain:5D|isolate:99|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 6hpf 5 S6,DMSO 6hpf 5 S6,DMSO 6hpf 5 S6,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-6hpf-5_S6_L001_R1_001.fastq.gz DMSO-6hpf-5_S6_L001_R2_001.fastq.gz,fastq fastq,107736291.0,525615.0,DMSO 6hpf 5 S6 L001 R2 001.fastq.gz,0:102.38 1:102.59,A:27251903;C:26520518;G:26567935;T:26878661;N:517274,102,102,,,27251903,26520518,26567935,26878661,517274,SRX4644397,SRS3742467,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96019,0.95982,0.00045,0.00043,0.99918,0.99916,0.37174,0.3343,151,148,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48753,SRR7789607,SRX4644396,SRS3742466,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 6hpf 1 S13,,strain:5D|isolate:100|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 6hpf 1 S13,TDCIPP 6hpf 1 S13,TDCIPP 6hpf 1 S13,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-6hpf-1_S13_L001_R2_001.fastq.gz TDCIPP-6hpf-1_S13_L001_R1_001.fastq.gz,fastq fastq,91271391.0,448917.0,TDCIPP 6hpf 1 S13 L001 R2 001.fastq.gz,0:101.61 1:101.71,A:23269221;C:22266290;G:22291849;T:22983659;N:460372,101,101,,,23269221,22266290,22291849,22983659,460372,SRX4644396,SRS3742466,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96069,0.96135,0.0005,0.00051,0.99916,0.99916,0.34621,0.3774,76,76,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48754,SRR7789608,SRX4644395,SRS3742465,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 2 S1,,strain:5D|isolate:91|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 2 S1,DMSO 3hpf 2 S1,DMSO 3hpf 2 S1,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-2_S1_L001_R1_001.fastq.gz DMSO-3hpf-2_S1_L001_R2_001.fastq.gz,fastq fastq,143035914.0,673342.0,DMSO 3hpf 2 S1 L001 R2 001.fastq.gz,0:106.19 1:106.24,A:37104542;C:34199194;G:34286529;T:36802368;N:643281,106,106,,,37104542,34199194,34286529,36802368,643281,SRX4644395,SRS3742465,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.97329,0.97288,0.00018,0.00017,0.99931,0.99931,0.41042,0.4514,39,39,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48755,SRR7789609,SRX4644394,SRS3742464,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 3 S2,,strain:5D|isolate:92|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 3 S2,DMSO 3hpf 3 S2,DMSO 3hpf 3 S2,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-3_S2_L001_R2_001.fastq.gz DMSO-3hpf-3_S2_L001_R1_001.fastq.gz,fastq fastq,121995763.0,560778.0,DMSO 3hpf 3 S2 L001 R2 001.fastq.gz,0:108.73 1:108.82,A:31569811;C:29316325;G:29402755;T:31346545;N:360327,108,108,,,31569811,29316325,29402755,31346545,360327,SRX4644394,SRS3742464,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96945,0.96871,0.00029,0.00031,0.99924,0.99924,0.3498,0.37356,134,134,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48756,SRR7789610,SRX4644393,SRS3742463,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 4 S3,,strain:5D|isolate:93|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 4 S3,DMSO 3hpf 4 S3,DMSO 3hpf 4 S3,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-4_S3_L001_R1_001.fastq.gz DMSO-3hpf-4_S3_L001_R2_001.fastq.gz,fastq fastq,131169421.0,625415.0,DMSO 3hpf 4 S3 L001 R2 001.fastq.gz,0:104.81 1:104.92,A:33973430;C:31403379;G:31490054;T:33651313;N:651245,104,104,,,33973430,31403379,31490054,33651313,651245,SRX4644393,SRS3742463,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98214,0.98232,0.00039,0.00042,0.99931,0.99928,0.43853,0.43838,94,94,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48757,SRR7789611,SRX4644392,SRS3742462,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 1 S10,,strain:5D|isolate:94|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 1 S10,TDCIPP 3hpf 1 S10,TDCIPP 3hpf 1 S10,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-1_S10_L001_R2_001.fastq.gz TDCIPP-3hpf-1_S10_L001_R1_001.fastq.gz,fastq fastq,142472001.0,675614.0,TDCIPP 3hpf 1 S10 L001 R2 001.fastq.gz,0:105.40 1:105.48,A:37237954;C:33780885;G:33866153;T:36894511;N:692498,105,105,,,37237954,33780885,33866153,36894511,692498,SRX4644392,SRS3742462,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98448,0.98456,3e-05,5e-05,0.99928,0.99926,0.44535,0.45235,89,89,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48758,SRR7789612,SRX4644391,SRS3742461,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 2 S11,,strain:5D|isolate:95|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 2 S11,TDCIPP 3hpf 2 S11,TDCIPP 3hpf 2 S11,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-2_S11_L001_R1_001.fastq.gz TDCIPP-3hpf-2_S11_L001_R2_001.fastq.gz,fastq fastq,135473127.0,649900.0,TDCIPP 3hpf 2 S11 L001 R2 001.fastq.gz,0:104.20 1:104.25,A:35005838;C:32424512;G:32538931;T:34827379;N:676467,104,104,,,35005838,32424512,32538931,34827379,676467,SRX4644391,SRS3742461,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98266,0.98245,0.0,0.0,0.99933,0.99933,0.49436,0.49577,59,59,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48759,SRR7789613,SRX4644390,SRS3742460,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 4 S12,,strain:5D|isolate:96|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 4 S12,TDCIPP 3hpf 4 S12,TDCIPP 3hpf 4 S12,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-4_S12_L001_R1_001.fastq.gz TDCIPP-3hpf-4_S12_L001_R2_001.fastq.gz,fastq fastq,126387362.0,600422.0,TDCIPP 3hpf 4 S12 L001 R1 001.fastq.gz,0:105.21 1:105.28,A:32731869;C:30187130;G:30351165;T:32470755;N:646443,105,105,,,32731869,30187130,30351165,32470755,646443,SRX4644390,SRS3742460,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.97915,0.97875,0.00012,0.00011,0.99933,0.99933,0.44431,0.44577,117,117,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures 48760,SRR7789614,SRX4644389,SRS3742459,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 6hpf 1 S4,,strain:5D|isolate:97|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 6hpf 1 S4,DMSO 6hpf 1 S4,DMSO 6hpf 1 S4,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-6hpf-1_S4_L001_R2_001.fastq.gz DMSO-6hpf-1_S4_L001_R1_001.fastq.gz,fastq fastq,95806388.0,464892.0,DMSO 6hpf 1 S4 L001 R2 001.fastq.gz,0:103.02 1:103.07,A:24562000;C:23294432;G:23307788;T:24218011;N:424157,103,103,,,24562000,23294432,23307788,24218011,424157,SRX4644389,SRS3742459,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95656,0.95712,0.0004,0.00039,0.99918,0.99916,0.34071,0.34145,94,151,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures 48761,SRR7789615,SRX4644388,SRS3742458,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 6hpf 3 S5,,strain:5D|isolate:98|dev stage:6 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 6hpf 3 S5,DMSO 6hpf 3 S5,DMSO 6hpf 3 S5,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-6hpf-3_S5_L001_R1_001.fastq.gz DMSO-6hpf-3_S5_L001_R2_001.fastq.gz,fastq fastq,105210098.0,508250.0,DMSO 6hpf 3 S5 L001 R1 001.fastq.gz,0:103.44 1:103.57,A:26828273;C:25677269;G:25721655;T:26524232;N:458669,103,103,,,26828273,25677269,25721655,26524232,458669,SRX4644388,SRS3742458,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.95583,0.95513,0.00047,0.00045,0.99916,0.99918,0.30844,0.29023,42,42,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Gastrula,Embryo,Embryo Imprecise,All anatomical structures