rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 33722,SRR30640695,SRX26062515,SRS22631699,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,WT24hpfcontrol1,,breed:natural spawning of AB adults|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:WT24hpfcontrol1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Wild type zebrafish : 12 embryos in total 2 3mg,WT24hpfcontrol1 R,WT24hpfcontrol1 R,Wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,WT24hpfcontrol1_R1.clean.fq.gz WT24hpfcontrol1_R2.clean.fq.gz,fastq fastq,6761688309.0,27496581.0,WT24hpfcontrol1 R1.clean.fq.gz,0:122.99 1:122.92,A:1946719560;C:1442103403;G:1451347536;T:1921456727;N:61083,122,122,,,1946719560,1442103403,1451347536,1921456727,61083,SRX26062515,SRS22631699,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33723,SRR30640696,SRX26062514,SRS22631698,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1MOMutant3,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1MOMutant3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of MO morphants zebrafish : 12 embryos in total 2 5mg,PCM1MOMutant3 R,PCM1MOMutant3 R,MO morphants zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1MOMutant3_R1.clean.fq.gz PCM1MOMutant3_R2.clean.fq.gz,fastq fastq,6356420208.0,23407180.0,PCM1MOMutant3 R1.clean.fq.gz,0:135.78 1:135.78,A:1742323782;C:1448163439;G:1451783264;T:1714090084;N:59639,135,135,,,1742323782,1448163439,1451783264,1714090084,59639,SRX26062514,SRS22631698,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33724,SRR30640697,SRX26062513,SRS22631697,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1MOMutant2,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1MOMutant2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of MO morphants zebrafish : 12 embryos in total 2 4mg,PCM1MOMutant2 R,PCM1MOMutant2 R,MO morphants zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1MOMutant2_R1.clean.fq.gz PCM1MOMutant2_R2.clean.fq.gz,fastq fastq,6146772469.0,22703012.0,PCM1MOMutant2 R1.clean.fq.gz,0:135.37 1:135.37,A:1647298308;C:1435201745;G:1438871965;T:1625343182;N:57269,135,135,,,1647298308,1435201745,1438871965,1625343182,57269,SRX26062513,SRS22631697,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33725,SRR30640698,SRX26062512,SRS22631696,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1MOMutant1,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1MOMutant1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of MO morphants zebrafish : 12 embryos in total 2 3mg,PCM1MOMutant1 R,PCM1MOMutant1 R,MO morphants zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1MOMutant1_R1.clean.fq.gz PCM1MOMutant1_R2.clean.fq.gz,fastq fastq,5701775379.0,21587297.0,PCM1MOMutant1 R1.clean.fq.gz,0:132.06 1:132.06,A:1578153876;C:1282130829;G:1284978375;T:1556460380;N:51919,132,132,,,1578153876,1282130829,1284978375,1556460380,51919,SRX26062512,SRS22631696,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33726,SRR30640699,SRX26062511,SRS22631695,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOmutant3,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOmutant3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO mutant zebrafish : 12 embryos in total 2 5mg,PCM1KOmutant3 R,PCM1KOmutant3 R,pcm1 KO mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOmutant3_R1.clean.fq.gz PCM1KOmutant3_R2.clean.fq.gz,fastq fastq,4673179612.0,17529406.0,PCM1KOmutant3 R1.clean.fq.gz,0:133.29 1:133.30,A:1266929858;C:1078407007;G:1080490713;T:1247307342;N:44692,133,133,,,1266929858,1078407007,1080490713,1247307342,44692,SRX26062511,SRS22631695,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33727,SRR30640700,SRX26062510,SRS22631694,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOmutant2,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOmutant2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO mutant zebrafish : 12 embryos in total 2 4mg,PCM1KOmutant2 R,PCM1KOmutant2 R,pcm1 KO mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOmutant2_R1.clean.fq.gz PCM1KOmutant2_R2.clean.fq.gz,fastq fastq,6073820902.0,23767661.0,PCM1KOmutant2 R1.clean.fq.gz,0:127.78 1:127.77,A:1691243395;C:1356197711;G:1357868249;T:1668456939;N:54608,127,127,,,1691243395,1356197711,1357868249,1668456939,54608,SRX26062510,SRS22631694,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33728,SRR30640701,SRX26062509,SRS22631693,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOmutant1,,breed:Tg [ef1:Myr Tdtomato]|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOmutant1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO mutant zebrafish : 12 embryos in total 2 3mg,PCM1KOmutant1 R,PCM1KOmutant1 R,KO mutant zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOmutant1_R1.clean.fq.gz PCM1KOmutant1_R2.clean.fq.gz,fastq fastq,6040589500.0,23826027.0,PCM1KOmutant1 R1.clean.fq.gz,0:126.76 1:126.76,A:1733588631;C:1297359473;G:1301151829;T:1708434373;N:55194,126,126,,,1733588631,1297359473,1301151829,1708434373,55194,SRX26062509,SRS22631693,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33729,SRR30640702,SRX26062508,SRS22631692,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOcompensate3,,breed:Tg [HuC:GFP|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOcompensate3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO compensate zebrafish : 12 embryos in total 2 5mg,PCM1KOcompensate3 R,PCM1KOcompensate3 R,pcm1 KO compensate zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOcompensate3_R1.clean.fq.gz PCM1KOcompensate3_R2.clean.fq.gz,fastq fastq,5632945620.0,21351897.0,PCM1KOcompensate3 R1.clean.fq.gz,0:131.92 1:131.90,A:1561604697;C:1264380828;G:1267746178;T:1539161674;N:52243,131,131,,,1561604697,1264380828,1267746178,1539161674,52243,SRX26062508,SRS22631692,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33730,SRR30640703,SRX26062507,SRS22631691,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,WT24hpfcontrol3,,breed:natural spawning of AB adults|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:WT24hpfcontrol3 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Wild type zebrafish : 12 embryos in total 2 5mg,WT24hpfcontrol3 R,WT24hpfcontrol3 R,Wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,WT24hpfcontrol3_R1.clean.fq.gz WT24hpfcontrol3_R2.clean.fq.gz,fastq fastq,5047867453.0,19837417.0,WT24hpfcontrol3 R1.clean.fq.gz,0:127.23 1:127.23,A:1412463929;C:1119657233;G:1121642146;T:1394058438;N:45707,127,127,,,1412463929,1119657233,1121642146,1394058438,45707,SRX26062507,SRS22631691,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33731,SRR30640704,SRX26062506,SRS22631690,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,WT24hpfcontrol2,,breed:natural spawning of AB adults|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:WT24hpfcontrol2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of Wild type zebrafish : 12 embryos in total 2 4mg,WT24hpfcontrol2 R,WT24hpfcontrol2 R,Wild type zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,WT24hpfcontrol2_R1.clean.fq.gz WT24hpfcontrol2_R2.clean.fq.gz,fastq fastq,5408273952.0,21601107.0,WT24hpfcontrol2 R1.clean.fq.gz,0:125.19 1:125.18,A:1510365712;C:1201646307;G:1204419555;T:1491793767;N:48611,125,125,,,1510365712,1201646307,1204419555,1491793767,48611,SRX26062506,SRS22631690,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33732,SRR30640705,SRX26062505,SRS22631689,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOcompensate2,,breed:Tg [HuC:GFP|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOcompensate2 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO compensate zebrafish : 12 embryos in total 2 4mg,PCM1KOcompensate2 R,PCM1KOcompensate2 R,pcm1 KO compensate zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOcompensate2_R1.clean.fq.gz PCM1KOcompensate2_R2.clean.fq.gz,fastq fastq,5996379188.0,22765993.0,PCM1KOcompensate2 R1.clean.fq.gz,0:131.70 1:131.70,A:1669800521;C:1339211911;G:1342418096;T:1644890999;N:57661,131,131,,,1669800521,1339211911,1342418096,1644890999,57661,SRX26062505,SRS22631689,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures 33733,SRR30640706,SRX26062504,SRS22631688,SRP532179,PRJNA1159911,Peri Centriolar Material 1 regulates polarized endosome dynamics and neural progenitor fate,PRJNA1159911,Other,RNA seq was performed on control and maternal zygotic developmentally defective pcm1 morphants MO and pcm1 knock out KO zebrafish embryos at 24 hpf.,,,,,PCM1KOcompensate1,,breed:Tg [HuC:GFP|age:24hpf|dev stage:adult|collection date:2021 03 19|geo loc name:USA:San Francisco|sex:not determined|tissue:PCM1KOcompensate1 embryo|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of pcm1 KO compensate zebrafish : 12 embryos in total 2 3mg,PCM1KOcompensate1 R,PCM1KOcompensate1 R,pcm1 KO compensate zebrafish,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP532179,,,PCM1KOcompensate1_R1.clean.fq.gz PCM1KOcompensate1_R2.clean.fq.gz,fastq fastq,5594219881.0,21191291.0,PCM1KOcompensate1 R1.clean.fq.gz,0:131.99 1:131.99,A:1594003450;C:1214578517;G:1215705001;T:1569880851;N:52062,131,131,,,1594003450,1214578517,1215705001,1569880851,52062,SRX26062504,SRS22631688,SRA1970017,"Huazhong Agricultural University, China|Department of Neurosurgery","Huazhong Agricultural University, China",,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-09-11,Multi-stage,Multi-stage,Embryo Imprecise,All anatomical structures