rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
68297,SRR099352,SRX041562,SRS172412,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode CTCGCGTGTC,4433 1MA D8,4433 1MA D8,,,,,,,,,,,1,4433 1MA D8,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,70233197.0,233302.0,4433 1MA D8,0:4 1:297.04,,4,297,,,,,,,,SRX041562,SRS172412,SRA029829,Stanford University|Quake,Stanford University,1,0.14812,,0.01088,,0.99969,,0.10799,,36,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System
68298,SRR099351,SRX041561,SRS172411,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode CGTGTCTCTA,4433 1MA C7,4433 1MA C7,,,,,,,,,,,1,4433 1MA C7,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,109094731.0,316792.0,4433 1MA C7,0:4 1:340.37,,4,340,,,,,,,,SRX041561,SRS172411,SRA029829,Stanford University|Quake,Stanford University,1,0.13409,,0.01258,,0.99955,,0.01535,,37,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System
68299,SRR099350,SRX041560,SRS172410,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode ATATCGCGAG,4433 1MA B6,4433 1MA B6,,,,,,,,,,,1,4433 1MA B6,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,110436791.0,353780.0,4433 1MA B6,0:4 1:308.16,,4,308,,,,,,,,SRX041560,SRS172410,SRA029829,Stanford University|Quake,Stanford University,1,0.28629,,0.01104,,0.99945,,0.0273,,107,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System
68300,SRR099349,SRX041559,SRS172409,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode ATCAGACACG,4433 1MA A5,4433 1MA A5,,,,,,,,,,,1,4433 1MA A5,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,107336405.0,335816.0,4433 1MA A5,0:4 1:315.63,,4,315,,,,,,,,SRX041559,SRS172409,SRA029829,Stanford University|Quake,Stanford University,1,0.16203,,0.01649,,0.99935,,0.00111,,37,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System
68301,SRR099329,SRX041558,SRS172408,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode AGCACTGTAG,4432 1MA D4,4432 1MA D4,,,,,,,,,,,1,4432 1MA D4,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,94113837.0,297721.0,4432 1MA D4,0:4 1:312.11,,4,312,,,,,,,,SRX041558,SRS172408,SRA029829,Stanford University|Quake,Stanford University,1,0.16753,,0.02013,,0.99979,,3e-05,,37,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System
68302,SRR099328,SRX041557,SRS172407,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode AGACGCACTC,4432 1MA C3,4432 1MA C3,,,,,,,,,,,1,4432 1MA C3,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,77768777.0,243405.0,4432 1MA C3,0:4 1:315.50,,4,315,,,,,,,,SRX041557,SRS172407,SRA029829,Stanford University|Quake,Stanford University,1,0.16711,,0.01816,,0.99979,,0.0,,37,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System
68303,SRR099327,SRX041556,SRS172406,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode ACGCTCGACA,4432 1MA B2,4432 1MA B2,,,,,,,,,,,1,4432 1MA B2,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,120450312.0,390504.0,4432 1MA B2,0:4 1:304.45,,4,304,,,,,,,,SRX041556,SRS172406,SRA029829,Stanford University|Quake,Stanford University,1,0.18757,,0.01811,,0.99977,,0.00024,,59,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System
68304,SRR099326,SRX041555,SRS172405,SRP005640,PRJNA79973,Zebrafish Development,4432-2WA,Other,Sample from publication: Determinism and Stochasticity during Maturation of the Zebrafish Antibody Repertoire. Authors: Jiang  Weinstein  Penland  White  Fish  and Quake.,,pubmed:21393572,Immunoglobulin heavy chain cDNA from 1 mpf WIK zebrafish Danio rerio  leading with MID barcode ACGAGTGCGT,4432 1MA A1,4432 1MA A1,,,,,,,,,,,1,4432 1MA A1,Zebrafish WIK,Standard Roche 454 GS Titanium shotgun library protocol was followed.,,,AMPLICON,TRANSCRIPTOMIC,PCR,SINGLE,LS454,454 GS FLX Titanium,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Technical Read</READ_CLASS><READ_TYPE>Adapter</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>5</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP005640,,,,,145945736.0,457354.0,4432 1MA A1,0:4 1:315.11,,4,315,,,,,,,,SRX041555,SRS172405,SRA029829,Stanford University|Quake,Stanford University,1,0.17607,,0.02473,,0.99957,,0.00036,,40,,B,,usable mapping rate,legacy,early,unknown,random_priming,unknown,bulk,other_seq,454,,United States,2011-04-07,Juvenile,Juvenile,BCR TCR repertoire,Hematopoietic System